BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00034826
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam...    73   3e-11
emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|72677...    73   3e-11
gb|AAD24831.1| putative non-LTR retroelement reverse transcripta...    72   5e-11
gb|AAD20714.1| putative non-LTR retroelement reverse transcripta...    72   5e-11
gb|ABD64923.1| hypothetical protein 24.t00067 [Brassica oleracea]      69   5e-10

>gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam: rvt.hmm, score:
           42.57) [Arabidopsis thaliana]
          Length = 1662

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 42/110 (38%), Positives = 61/110 (55%), Gaps = 1/110 (0%)
 Frame = +3

Query: 3   WNKPLQGTPMFQLSARIKLCRVALLKLKRTHNMNSGKLIQSIKTRME-TMQDLGANRNWS 179
           WNK + G     L  +++ CR A+ KLK   N+NS   I  ++  ++  M  +      +
Sbjct: 641 WNKAINGQRK-HLPDQVRTCRQAMAKLKHKSNLNSRIRINQLQAALDKAMSSVNRTERRT 699

Query: 180 EWHKLQDELNEAYGQEELYWQQKSRVQ*LREGDKNTKFFQEFTRQRWRRN 329
             H +Q EL  AY  EE YWQQKSR Q ++EGD+NT+FF   T+ R+  N
Sbjct: 700 ISH-IQRELTVAYRDEERYWQQKSRNQWMKEGDRNTEFFHACTKTRFSVN 748


>emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|7267781|emb|CAB81184.1|
           putative protein [Arabidopsis thaliana]
          Length = 1294

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 42/110 (38%), Positives = 61/110 (55%), Gaps = 1/110 (0%)
 Frame = +3

Query: 3   WNKPLQGTPMFQLSARIKLCRVALLKLKRTHNMNSGKLIQSIKTRME-TMQDLGANRNWS 179
           WNK + G     L  +++ CR A+ KLK   N+NS   I  ++  ++  M  +      +
Sbjct: 621 WNKAINGQRK-HLPDQVRTCRQAMAKLKHKSNLNSRIRINQLQAALDKAMSSVNRTERRT 679

Query: 180 EWHKLQDELNEAYGQEELYWQQKSRVQ*LREGDKNTKFFQEFTRQRWRRN 329
             H +Q EL  AY  EE YWQQKSR Q ++EGD+NT+FF   T+ R+  N
Sbjct: 680 ISH-IQRELTVAYRDEERYWQQKSRNQWMKEGDRNTEFFHACTKTRFSVN 728


>gb|AAD24831.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1524

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 36/114 (31%), Positives = 68/114 (59%)
 Frame = +3

Query: 6   NKPLQGTPMFQLSARIKLCRVALLKLKRTHNMNSGKLIQSIKTRMETMQDLGANRNWSEW 185
           N+  + TP   ++ RI  CR A+ +LK   N+NS + I+ +++ +    +     +    
Sbjct: 418 NRNSRSTP---ITERISSCRQAMARLKHASNLNSEQRIKKLQSSLNRAMESTRRVDRQLI 474

Query: 186 HKLQDELNEAYGQEELYWQQKSRVQ*LREGDKNTKFFQEFTRQRWRRNCIDRLI 347
            +LQ+ L +A+  EE+YW+QKSR Q ++EGD+NT +F   T+ R+ +N ++ ++
Sbjct: 475 PQLQESLAKAFSDEEIYWKQKSRNQWMKEGDQNTGYFHACTKTRYSQNRVNTIM 528


>gb|AAD20714.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1750

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 36/114 (31%), Positives = 68/114 (59%)
 Frame = +3

Query: 6   NKPLQGTPMFQLSARIKLCRVALLKLKRTHNMNSGKLIQSIKTRMETMQDLGANRNWSEW 185
           N+  + TP   ++ RI  CR A+ +LK   N+NS + I+ +++ +    +     +    
Sbjct: 644 NRNSRSTP---ITERISSCRQAMARLKHASNLNSEQRIKKLQSSLNRAMESTRRVDRQLI 700

Query: 186 HKLQDELNEAYGQEELYWQQKSRVQ*LREGDKNTKFFQEFTRQRWRRNCIDRLI 347
            +LQ+ L +A+  EE+YW+QKSR Q ++EGD+NT +F   T+ R+ +N ++ ++
Sbjct: 701 PQLQESLAKAFSDEEIYWKQKSRNQWMKEGDQNTGYFHACTKTRYSQNRVNTIM 754


>gb|ABD64923.1| hypothetical protein 24.t00067 [Brassica oleracea]
          Length = 381

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 40/111 (36%), Positives = 61/111 (54%)
 Frame = +3

Query: 3   WNKPLQGTPMFQLSARIKLCRVALLKLKRTHNMNSGKLIQSIKTRMETMQDLGANRNWSE 182
           WN  + G  +  +S RI+ CR A+ + K+  N NS K I+++   ++           SE
Sbjct: 62  WNSTIPGQHV-SVSDRIRKCRHAISQWKKAKNTNSAKRIKALTALIDEAHS-DPLCPLSE 119

Query: 183 WHKLQDELNEAYGQEELYWQQKSRVQ*LREGDKNTKFFQEFTRQRWRRNCI 335
            H L+ EL +AY  EE +W+ KSR+Q L  GD+N +FF   T+ R  +N I
Sbjct: 120 IHNLRKELLQAYKDEEAFWRNKSRIQWLTYGDRNIRFFHASTKNRRAKNKI 170