BLASTX nr result

ID: Cephaelis21_contig00034670 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00034670
         (637 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332583.1| f-box family protein [Populus trichocarpa] g...    63   5e-08
ref|XP_002278642.1| PREDICTED: dof zinc finger protein DOF3.6 [V...    59   1e-06
emb|CAN79495.1| hypothetical protein VITISV_020749 [Vitis vinifera]    59   1e-06
ref|XP_002527728.1| zinc finger protein, putative [Ricinus commu...    57   3e-06
emb|CBI31672.3| unnamed protein product [Vitis vinifera]               56   5e-06

>ref|XP_002332583.1| f-box family protein [Populus trichocarpa]
           gi|222832921|gb|EEE71398.1| f-box family protein
           [Populus trichocarpa]
          Length = 337

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 32/46 (69%), Positives = 35/46 (76%)
 Frame = -3

Query: 533 ASVKLEENPQQGPNLSRNFLSIPRNEQYWVGRNAWTDLSGSTSSAT 396
           ASVK+E N  QG NLSRNFL I  N+QYW G NAWTDL G TSS+T
Sbjct: 290 ASVKMEGN--QGLNLSRNFLGISGNDQYWGGNNAWTDLPGFTSSST 333


>ref|XP_002278642.1| PREDICTED: dof zinc finger protein DOF3.6 [Vitis vinifera]
          Length = 338

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 31/64 (48%), Positives = 39/64 (60%)
 Frame = -3

Query: 587 GTTDQLGSQTIMEAAAVAASVKLEENPQQGPNLSRNFLSIPRNEQYWVGRNAWTDLSGST 408
           G +  L ++ +        +VK+EEN  QG NLSRNFL +P N+QYW G N W DLSG  
Sbjct: 274 GGSGHLRAKALDSGVTQMTAVKIEEN--QGLNLSRNFLGLPGNDQYWSG-NTWNDLSGFN 330

Query: 407 SSAT 396
           SS T
Sbjct: 331 SSTT 334


>emb|CAN79495.1| hypothetical protein VITISV_020749 [Vitis vinifera]
          Length = 338

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 31/64 (48%), Positives = 39/64 (60%)
 Frame = -3

Query: 587 GTTDQLGSQTIMEAAAVAASVKLEENPQQGPNLSRNFLSIPRNEQYWVGRNAWTDLSGST 408
           G +  L ++ +        +VK+EEN  QG NLSRNFL +P N+QYW G N W DLSG  
Sbjct: 274 GGSGHLRAKALDSGVTQMTAVKIEEN--QGLNLSRNFLGLPGNDQYWSG-NTWNDLSGFN 330

Query: 407 SSAT 396
           SS T
Sbjct: 331 SSTT 334


>ref|XP_002527728.1| zinc finger protein, putative [Ricinus communis]
           gi|223532869|gb|EEF34641.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 338

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 37/80 (46%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
 Frame = -3

Query: 629 FEAGAVDHPLGYGDGTTDQLGSQTIMEAAAVAASVKLEENPQQGPNLSRNFLSI--PRNE 456
           FE GA   P GYG G   Q+  +T        ASVK+E+N +   NLSR FL I  P ++
Sbjct: 260 FEGGA--EPSGYGGGIGGQVRPRTSTSLTTQFASVKMEDNHEL--NLSRQFLGINNPGSD 315

Query: 455 QYWVGRNAWTDLSGSTSSAT 396
           QYW    AWTDLS  +SS+T
Sbjct: 316 QYW-SSTAWTDLSSFSSSST 334


>emb|CBI31672.3| unnamed protein product [Vitis vinifera]
          Length = 337

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 29/62 (46%), Positives = 38/62 (61%)
 Frame = -3

Query: 587 GTTDQLGSQTIMEAAAVAASVKLEENPQQGPNLSRNFLSIPRNEQYWVGRNAWTDLSGST 408
           G +  L ++ +        +VK+EEN  QG NLSRNFL +P N+QYW G N W DLSGS 
Sbjct: 274 GGSGHLRAKALDSGVTQMTAVKIEEN--QGLNLSRNFLGLPGNDQYWSG-NTWNDLSGSV 330

Query: 407 SS 402
            +
Sbjct: 331 KA 332


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