BLASTX nr result

ID: Cephaelis21_contig00034669 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00034669
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003626000.1| Pentatricopeptide repeat protein [Medicago t...    89   4e-16
ref|XP_002462229.1| hypothetical protein SORBIDRAFT_02g022150 [S...    72   6e-11
ref|XP_002301973.1| predicted protein [Populus trichocarpa] gi|2...    72   6e-11
tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea m...    71   8e-11
ref|XP_002880355.1| pentatricopeptide repeat-containing protein ...    70   1e-10

>ref|XP_003626000.1| Pentatricopeptide repeat protein [Medicago truncatula]
           gi|355501015|gb|AES82218.1| Pentatricopeptide repeat
           protein [Medicago truncatula]
          Length = 607

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 42/78 (53%), Positives = 55/78 (70%), Gaps = 1/78 (1%)
 Frame = +2

Query: 2   MPFEPDVVVWAALLGACGMHSCSEIGESAASKIYKLEEDHPAVYSMLCKIHGERQVWSSM 181
           MPFEPDVV+W ALL ACG+HS  E+GE AA +I +LE  HP  YS+L KI GE+ VWSS+
Sbjct: 431 MPFEPDVVLWGALLAACGLHSNLELGEYAAERIRRLESSHPVSYSVLSKIQGEKGVWSSV 490

Query: 182 TNMK-MIRSKRAKKQKAG 232
             ++  ++ +  KKQ  G
Sbjct: 491 NELRDTMKERGIKKQTPG 508


>ref|XP_002462229.1| hypothetical protein SORBIDRAFT_02g022150 [Sorghum bicolor]
           gi|241925606|gb|EER98750.1| hypothetical protein
           SORBIDRAFT_02g022150 [Sorghum bicolor]
          Length = 686

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 34/82 (41%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
 Frame = +2

Query: 2   MPFEPDVVVWAALLGACGMHSCSEIGESAASKIYKLEEDHPAVYSMLCKIHGERQVWSSM 181
           MPFEPD  +W ALLGA  +H  SE+G +AA KI++LE ++  +Y +L  I+     W  +
Sbjct: 495 MPFEPDSTMWGALLGASRIHRNSELGRNAAEKIFELEPENAGMYVLLSNIYASSGKWRDV 554

Query: 182 TNMKMIRSKRAKKQKAG-SWIE 244
             M+++  +R  K+  G SWIE
Sbjct: 555 DKMRLMMHERGVKKVPGFSWIE 576


>ref|XP_002301973.1| predicted protein [Populus trichocarpa] gi|222843699|gb|EEE81246.1|
           predicted protein [Populus trichocarpa]
          Length = 716

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 33/82 (40%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
 Frame = +2

Query: 2   MPFEPDVVVWAALLGACGMHSCSEIGESAASKIYKLEEDHPAVYSMLCKIHGERQVWSSM 181
           MPFEPD  VW ALL +C +H+  ++GE AA ++++LE  +P  Y +L  I+  + +W  +
Sbjct: 507 MPFEPDSCVWGALLSSCRVHNRVDLGEIAAKRVFELEPRNPGNYILLSNIYASKAMWVEV 566

Query: 182 TNMK-MIRSKRAKKQKAGSWIE 244
             ++ M+RS+  KK    SWIE
Sbjct: 567 DMVRDMMRSRGLKKNPGYSWIE 588


>tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
          Length = 824

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 35/82 (42%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
 Frame = +2

Query: 2   MPFEPDVVVWAALLGACGMHSCSEIGESAASKIYKLEEDHPAVYSMLCKIHGERQVWSSM 181
           MPFEPD  +W ALLGA  +H  SE+G +AA KI++LE ++  +Y +L  I+     W  +
Sbjct: 615 MPFEPDSTMWGALLGASRIHRNSELGRNAAEKIFELEPENAGMYVLLSNIYASSGKWRDV 674

Query: 182 TNMKMIRSKRAKKQKAG-SWIE 244
             M+ I  +R  K+  G SWIE
Sbjct: 675 DKMRHIMHERGVKKVPGFSWIE 696


>ref|XP_002880355.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297326194|gb|EFH56614.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 599

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 31/82 (37%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
 Frame = +2

Query: 2   MPFEPDVVVWAALLGACGMHSCSEIGESAASKIYKLEEDHPAVYSMLCKIHGERQVWSSM 181
           MPFEPD  +W A+LG C +H   E+G+ AA ++ KL+ +  A Y +L  I+ +   W  +
Sbjct: 475 MPFEPDKHIWNAILGVCRIHGNEELGKKAAEELIKLDPESSAPYILLSSIYADHGKWELV 534

Query: 182 TNMK-MIRSKRAKKQKAGSWIE 244
             ++ +++ +R  K+KA SWIE
Sbjct: 535 EKLRGIMKKRRVNKEKAVSWIE 556


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