BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00034590
         (230 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm,...    82   5e-14
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc...    81   1e-13
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]            80   1e-13
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ...    80   1e-13
dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like ...    80   2e-13

>gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm, score: 60.13)
           [Arabidopsis thaliana]
          Length = 1164

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 39/76 (51%), Positives = 53/76 (69%)
 Frame = -1

Query: 230 VGGDVCAAIREFFSSGRLLKQMNHTVIALVPKSSRTSSVTDYRSISCCNVLYKVIFKILA 51
           +GG+V  AI EFF+SG+LLKQ N T + L+PK +  SS++D+R ISC N +YKVI K+L 
Sbjct: 379 IGGEVTEAIHEFFTSGKLLKQWNATNLVLIPKITNASSMSDFRPISCLNTVYKVISKLLT 438

Query: 50  ARMTTVLPGVIHEAQS 3
            R+   LP  I  +QS
Sbjct: 439 DRLKDFLPAAISHSQS 454


>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
          Length = 1214

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 38/76 (50%), Positives = 51/76 (67%)
 Frame = -1

Query: 230 VGGDVCAAIREFFSSGRLLKQMNHTVIALVPKSSRTSSVTDYRSISCCNVLYKVIFKILA 51
           VG  + AA++EFF SGRLL Q N T + +VPK      +T++R ISCCN +YKVI K+LA
Sbjct: 481 VGPSLIAAVQEFFRSGRLLGQWNSTAVTMVPKKPNADRITEFRPISCCNAIYKVISKLLA 540

Query: 50  ARMTTVLPGVIHEAQS 3
            R+  +LP  I  +QS
Sbjct: 541 RRLENILPLWISPSQS 556


>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1072

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 38/76 (50%), Positives = 54/76 (71%)
 Frame = -1

Query: 230 VGGDVCAAIREFFSSGRLLKQMNHTVIALVPKSSRTSSVTDYRSISCCNVLYKVIFKILA 51
           +G +V AAI EFF SG+LLKQ N T + L+PK+S   +++++R ISC N LYKVI K+L 
Sbjct: 342 IGPEVLAAIHEFFDSGQLLKQWNATTLVLIPKTSNACTISEFRPISCLNTLYKVISKLLT 401

Query: 50  ARMTTVLPGVIHEAQS 3
           +R+  +L  VI  +QS
Sbjct: 402 SRLQGLLSAVIGHSQS 417


>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
           thaliana]
          Length = 1072

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 38/76 (50%), Positives = 54/76 (71%)
 Frame = -1

Query: 230 VGGDVCAAIREFFSSGRLLKQMNHTVIALVPKSSRTSSVTDYRSISCCNVLYKVIFKILA 51
           +G +V AAI EFF SG+LLKQ N T + L+PK+S   +++++R ISC N LYKVI K+L 
Sbjct: 342 IGPEVLAAIHEFFDSGQLLKQWNATTLVLIPKTSNACTISEFRPISCLNTLYKVISKLLT 401

Query: 50  ARMTTVLPGVIHEAQS 3
           +R+  +L  VI  +QS
Sbjct: 402 SRLQGLLSAVIGHSQS 417


>dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 893

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 39/76 (51%), Positives = 54/76 (71%)
 Frame = -1

Query: 230 VGGDVCAAIREFFSSGRLLKQMNHTVIALVPKSSRTSSVTDYRSISCCNVLYKVIFKILA 51
           VG +V  A++EFF SG+LLKQ N T + L+PK + +S +TD+R ISC N LYKVI K+L 
Sbjct: 483 VGPEVTEAVQEFFRSGQLLKQWNATTLVLIPKITNSSKMTDFRPISCLNTLYKVIAKLLT 542

Query: 50  ARMTTVLPGVIHEAQS 3
           +R+  +L  VI  +QS
Sbjct: 543 SRLKKLLNEVISPSQS 558