BLASTX nr result

ID: Cephaelis21_contig00034581 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00034581
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFD98849.1| DNA polymerase alpha catalytic subunit [Solanum l...   108   4e-22
ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic su...   103   1e-20
emb|CBI21412.3| unnamed protein product [Vitis vinifera]              103   1e-20
ref|XP_002865605.1| predicted protein [Arabidopsis lyrata subsp....    99   5e-19
ref|XP_002310719.1| predicted protein [Populus trichocarpa] gi|2...    98   8e-19

>gb|AFD98849.1| DNA polymerase alpha catalytic subunit [Solanum lycopersicum]
          Length = 1561

 Score =  108 bits (270), Expect = 4e-22
 Identities = 51/65 (78%), Positives = 57/65 (87%)
 Frame = -1

Query: 197 EMASGLKTEISKQLLKCNVSSFSMAPVKRNYAFERSDIPRGENYVLKISYPFKDPPLSLD 18
           EMASGLK E    LL+ N+SSFSMAPVKRNYAFERSD+PRGEN+VLKI+YPFKDPPL  D
Sbjct: 458 EMASGLKAECRNYLLEHNISSFSMAPVKRNYAFERSDVPRGENFVLKINYPFKDPPLPSD 517

Query: 17  IRGEN 3
           +RGEN
Sbjct: 518 LRGEN 522


>ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic subunit-like [Vitis
           vinifera]
          Length = 1522

 Score =  103 bits (258), Expect = 1e-20
 Identities = 48/65 (73%), Positives = 58/65 (89%)
 Frame = -1

Query: 200 KEMASGLKTEISKQLLKCNVSSFSMAPVKRNYAFERSDIPRGENYVLKISYPFKDPPLSL 21
           +++ASGLK EI+KQLL  NVS+FSM PVKR+YAFER+DIP GENYVLKI+YPFKDPPL  
Sbjct: 421 QDVASGLKNEIAKQLLNLNVSTFSMTPVKRSYAFERADIPVGENYVLKINYPFKDPPLPA 480

Query: 20  DIRGE 6
           D++GE
Sbjct: 481 DLKGE 485


>emb|CBI21412.3| unnamed protein product [Vitis vinifera]
          Length = 1561

 Score =  103 bits (258), Expect = 1e-20
 Identities = 48/65 (73%), Positives = 58/65 (89%)
 Frame = -1

Query: 200 KEMASGLKTEISKQLLKCNVSSFSMAPVKRNYAFERSDIPRGENYVLKISYPFKDPPLSL 21
           +++ASGLK EI+KQLL  NVS+FSM PVKR+YAFER+DIP GENYVLKI+YPFKDPPL  
Sbjct: 422 QDVASGLKNEIAKQLLNLNVSTFSMTPVKRSYAFERADIPVGENYVLKINYPFKDPPLPA 481

Query: 20  DIRGE 6
           D++GE
Sbjct: 482 DLKGE 486


>ref|XP_002865605.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297311440|gb|EFH41864.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 1449

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 47/65 (72%), Positives = 56/65 (86%)
 Frame = -1

Query: 197 EMASGLKTEISKQLLKCNVSSFSMAPVKRNYAFERSDIPRGENYVLKISYPFKDPPLSLD 18
           EMAS LK EIS+QLLK NVS++SMA VKRNYAF+R D+P GE YVLKI+YPFKDPPL  D
Sbjct: 386 EMASKLKKEISQQLLKLNVSNYSMALVKRNYAFDRPDVPAGEQYVLKINYPFKDPPLPED 445

Query: 17  IRGEN 3
           ++GE+
Sbjct: 446 LKGES 450


>ref|XP_002310719.1| predicted protein [Populus trichocarpa] gi|222853622|gb|EEE91169.1|
           predicted protein [Populus trichocarpa]
          Length = 1312

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 45/65 (69%), Positives = 54/65 (83%)
 Frame = -1

Query: 200 KEMASGLKTEISKQLLKCNVSSFSMAPVKRNYAFERSDIPRGENYVLKISYPFKDPPLSL 21
           ++MA  LK E++ QLL  NVSSFSMAPVKR YAF+RSDIP GENY LKI+YPFK+PPL  
Sbjct: 206 QDMAYELKNEVASQLLSLNVSSFSMAPVKRRYAFDRSDIPAGENYALKINYPFKEPPLPA 265

Query: 20  DIRGE 6
           D++GE
Sbjct: 266 DLKGE 270


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