BLASTX nr result

ID: Cephaelis21_contig00034302 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00034302
         (461 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAD41785.1| OSJNBa0035M09.1 [Oryza sativa Japonica Group] gi...    48   2e-06
emb|CAN69917.1| hypothetical protein VITISV_044429 [Vitis vinifera]    47   8e-06

>emb|CAD41785.1| OSJNBa0035M09.1 [Oryza sativa Japonica Group]
            gi|38346911|emb|CAE03883.2| OSJNBb0015N08.11 [Oryza
            sativa Japonica Group]
          Length = 1026

 Score = 47.8 bits (112), Expect(2) = 2e-06
 Identities = 26/84 (30%), Positives = 41/84 (48%)
 Frame = -3

Query: 294  SKCPHCPALDTLEHCFSECGLAKAVWVEMAVTLNVDLDFSGGLFSLLHSFWSCASSSISL 115
            +KC  C  ++T++H F +C LA+ +W  +A  LNV    S      L   W  +    + 
Sbjct: 881  NKCQFCDKVETVQHLFFDCPLARLIWNIIACALNVKPVLSR---QDLFGSWIQSMDKFTK 937

Query: 114  ELVWLLPSYVCWLVWKARNLFIFQ 43
             LV +  + V W +WK RN   F+
Sbjct: 938  NLVIVGIAAVLWSIWKCRNKACFE 961



 Score = 28.9 bits (63), Expect(2) = 2e-06
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -1

Query: 461 LKSAYNLLRPRQQEQSVLDKVWNVRIPVKISCFMW 357
           ++S Y  L+  QQ      K+W  R+P+KI  F+W
Sbjct: 825 VRSFYRALK-LQQTSFPNKKIWKFRVPLKIRIFIW 858


>emb|CAN69917.1| hypothetical protein VITISV_044429 [Vitis vinifera]
          Length = 613

 Score = 46.6 bits (109), Expect(2) = 8e-06
 Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 9/108 (8%)
 Frame = -3

Query: 309 GFNLPSKCPHCPALD-TLEHCFSECGLAKAVWVEMAVTLNVDLDFSGGLFSLLHSFWSCA 133
           G++LP++C  C   + T+ H    C +AK +W  + V   V   F   +  +L S W  +
Sbjct: 482 GWHLPNRCFLCGCEEETINHILIHCTMAKGLWNIILVLCGVQWVFPNSVKEVLSS-WKGS 540

Query: 132 SSSISLELVWL-LPSYVCWLVWKARN-------LFIFQSVKTTAAGVI 13
                 + VW  +P ++ W +WK RN       +  +Q +KT+   +I
Sbjct: 541 FVGRKRKKVWKSIPLFIFWTIWKERNKLAFKGGVLAYQKLKTSLVYII 588



 Score = 27.7 bits (60), Expect(2) = 8e-06
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = -1

Query: 461 LKSAYNLLRPRQQEQSVLDKVWNVRIPVKISCFMW 357
           +K AYN+L   Q        VW  ++P KI+ F W
Sbjct: 431 VKKAYNVLVNSQGLDFPHSNVWVDKVPTKIAFFAW 465


Top