BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00034142
         (574 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC63844.1| putative non-LTR retroelement reverse transcripta...    56   1e-13
ref|XP_002317858.1| predicted protein [Populus trichocarpa] gi|2...    61   2e-13
ref|XP_003541643.1| PREDICTED: uncharacterized protein LOC100817...    57   6e-13
emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis ...    52   6e-13
gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptas...    57   2e-12

>gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1231

 Score = 56.2 bits (134), Expect(2) = 1e-13
 Identities = 27/61 (44%), Positives = 41/61 (67%)
 Frame = +2

Query: 11  LGCQLYKGRRKCAYFHRILQKIDAKLLGWKGKLLSTAGRLTLIKHVLASIPLYFLSAMHP 190
           LG  + + R     F  +L+++ A+L GWKG+ LS AGR+TL K VL+SIP++ +SA+  
Sbjct: 614 LGMPILQKRMNKETFGEVLERVSARLAGWKGRSLSLAGRITLTKAVLSSIPVHVMSAILL 673

Query: 191 P 193
           P
Sbjct: 674 P 674



 Score = 45.1 bits (105), Expect(2) = 1e-13
 Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
 Frame = +1

Query: 211 IDKRFSDFLWGSGEN*RKRKWISWEKVTVPTESNGLGIRSVPAIVKAY*YKLWWK-IDNS 387
           +D+    FLWGS    +K+  +SW K+  P    G+G+RS   + KA   K+ W+ + + 
Sbjct: 681 LDRYSRTFLWGSTMEKKKQHLLSWRKICKPKAEGGIGLRSARDMNKALVAKVGWRLLQDK 740

Query: 388 LGIWAEFV 411
             +WA  V
Sbjct: 741 ESLWARVV 748


>ref|XP_002317858.1| predicted protein [Populus trichocarpa] gi|222858531|gb|EEE96078.1|
           predicted protein [Populus trichocarpa]
          Length = 1052

 Score = 61.2 bits (147), Expect(2) = 2e-13
 Identities = 30/61 (49%), Positives = 41/61 (67%)
 Frame = +2

Query: 11  LGCQLYKGRRKCAYFHRILQKIDAKLLGWKGKLLSTAGRLTLIKHVLASIPLYFLSAMHP 190
           LG  L +GR K A+F+ I+ KI  +L  WKGKLL+ AGR+TL K V+ S+P+Y +  M  
Sbjct: 598 LGFPLIQGRVKMAHFNFIIDKIKGRLAEWKGKLLNKAGRITLAKSVIISMPIYLMQNMWL 657

Query: 191 P 193
           P
Sbjct: 658 P 658



 Score = 39.7 bits (91), Expect(2) = 2e-13
 Identities = 23/64 (35%), Positives = 30/64 (46%)
 Frame = +1

Query: 196 AYCSFIDKRFSDFLWGSGEN*RKRKWISWEKVTVPTESNGLGIRSVPAIVKAY*YKLWWK 375
           A C  IDK    F+WG+ E       I+W  VT P  + GLG+R       +   KL W 
Sbjct: 660 ATCMQIDKIVKQFIWGNQETGGSWNLINWNMVTRPRINGGLGVRETRFGNISLLGKLIWH 719

Query: 376 IDNS 387
           + NS
Sbjct: 720 LPNS 723


>ref|XP_003541643.1| PREDICTED: uncharacterized protein LOC100817727 [Glycine max]
          Length = 1869

 Score = 56.6 bits (135), Expect(2) = 6e-13
 Identities = 27/65 (41%), Positives = 37/65 (56%)
 Frame = +2

Query: 14  GCQLYKGRRKCAYFHRILQKIDAKLLGWKGKLLSTAGRLTLIKHVLASIPLYFLSAMHPP 193
           GC +    +    +  I+ K +AKL  WK K LS  GR+TLI  VL ++P+Y LS    P
Sbjct: 49  GCLVGSNPKSWRVWQPIISKFEAKLTKWKQKCLSMGGRITLINSVLTALPIYLLSFFRIP 108

Query: 194 KHIVH 208
           K +VH
Sbjct: 109 KKVVH 113



 Score = 42.4 bits (98), Expect(2) = 6e-13
 Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
 Frame = +1

Query: 229 DFLWGSGEN*RKRKWISWEKVTVPTESNGLGIRSVPAIVKAY*YKLWWKIDNSLG-IWAE 405
           +FLWG      K  W++W+ V +P    GLGI+ +    +A   K  W++ N+   +WA 
Sbjct: 121 NFLWGGVNEATKIPWVNWDTVCLPKTKGGLGIKDLTKFNEALLSKWGWELANNQNHLWAR 180

Query: 406 FVAS 417
            + S
Sbjct: 181 TLMS 184


>emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis thaliana]
           gi|7268307|emb|CAB78601.1| reverse transcriptase like
           protein [Arabidopsis thaliana]
          Length = 929

 Score = 51.6 bits (122), Expect(2) = 6e-13
 Identities = 26/70 (37%), Positives = 43/70 (61%)
 Frame = +2

Query: 11  LGCQLYKGRRKCAYFHRILQKIDAKLLGWKGKLLSTAGRLTLIKHVLASIPLYFLSAMHP 190
           LG  + + R     F  +L+++ ++L GWK + LS AGR+TL K VL SIP++ +S++  
Sbjct: 549 LGMPVLQKRINKDTFGEVLERVSSRLSGWKSRSLSLAGRITLTKAVLMSIPIHTMSSILL 608

Query: 191 PKHIVHLLTK 220
           P  ++  L K
Sbjct: 609 PASLLEQLDK 618



 Score = 47.4 bits (111), Expect(2) = 6e-13
 Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
 Frame = +1

Query: 211 IDKRFSDFLWGSGEN*RKRKWISWEKVTVPTESNGLGIRSVPAIVKAY*YKLWWK-IDNS 387
           +DK   +FLWGS    RK+  +SW+KV  P  + GLG+R+   + +A   K+ W+ +++ 
Sbjct: 616 LDKVSRNFLWGSTVEKRKQHLLSWKKVCRPKAAGGLGLRASKDMNRALLAKVGWRLLNDK 675

Query: 388 LGIWA 402
           + +WA
Sbjct: 676 VSLWA 680


>gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptase);
           Polynucleotidyl transferase, Ribonuclease H fold
           [Medicago truncatula]
          Length = 729

 Score = 57.4 bits (137), Expect(2) = 2e-12
 Identities = 30/70 (42%), Positives = 40/70 (57%)
 Frame = +2

Query: 11  LGCQLYKGRRKCAYFHRILQKIDAKLLGWKGKLLSTAGRLTLIKHVLASIPLYFLSAMHP 190
           LG  +  GR    +F+ I+ KI  KL GWK + LS AGR+TL K V++SIP Y +     
Sbjct: 181 LGANITPGRTSRGHFNHIINKIQNKLSGWKQQCLSLAGRITLSKFVISSIPYYHMQYAKI 240

Query: 191 PKHIVHLLTK 220
           PK I   + K
Sbjct: 241 PKTICDEIEK 250



 Score = 39.7 bits (91), Expect(2) = 2e-12
 Identities = 18/62 (29%), Positives = 30/62 (48%)
 Frame = +1

Query: 193 KAYCSFIDKRFSDFLWGSGEN*RKRKWISWEKVTVPTESNGLGIRSVPAIVKAY*YKLWW 372
           K  C  I+K    F+WG     RK   +SW+   +P  + GLG +    + +A+  K+ W
Sbjct: 242 KTICDEIEKIQRGFVWGDSNQGRKAHLVSWDVCCLPKMNGGLGFKRPHHMNEAFLMKMLW 301

Query: 373 KI 378
            +
Sbjct: 302 NL 303