BLASTX nr result

ID: Cephaelis21_contig00034053 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00034053
         (961 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30347.3| unnamed protein product [Vitis vinifera]              116   7e-24
ref|XP_002275884.1| PREDICTED: putative pentatricopeptide repeat...   116   7e-24
emb|CAN66059.1| hypothetical protein VITISV_017037 [Vitis vinifera]   116   7e-24
ref|XP_004143391.1| PREDICTED: putative pentatricopeptide repeat...   115   1e-23
ref|XP_002309408.1| predicted protein [Populus trichocarpa] gi|2...   101   3e-19

>emb|CBI30347.3| unnamed protein product [Vitis vinifera]
          Length = 560

 Score =  116 bits (291), Expect = 7e-24
 Identities = 54/74 (72%), Positives = 62/74 (83%)
 Frame = -2

Query: 957 GAWGALLGACNLHCDLELGEKVARRLIELEPLNSGNYVMLSSIYAAANRWSAVSDLMIKM 778
           GAWGALLGAC LHCD+ELGE VA +L ELEP N+GNYV+LS+IYAAA +W  VS L  KM
Sbjct: 487 GAWGALLGACKLHCDIELGEVVADQLFELEPQNAGNYVLLSNIYAAAEQWLDVSLLRNKM 546

Query: 777 NERGLKKIPGCSWI 736
            ERG++KIPGCSWI
Sbjct: 547 RERGIRKIPGCSWI 560


>ref|XP_002275884.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g37570 [Vitis vinifera]
          Length = 561

 Score =  116 bits (291), Expect = 7e-24
 Identities = 54/74 (72%), Positives = 62/74 (83%)
 Frame = -2

Query: 957 GAWGALLGACNLHCDLELGEKVARRLIELEPLNSGNYVMLSSIYAAANRWSAVSDLMIKM 778
           GAWGALLGAC LHCD+ELGE VA +L ELEP N+GNYV+LS+IYAAA +W  VS L  KM
Sbjct: 488 GAWGALLGACKLHCDIELGEVVADQLFELEPQNAGNYVLLSNIYAAAEQWLDVSLLRNKM 547

Query: 777 NERGLKKIPGCSWI 736
            ERG++KIPGCSWI
Sbjct: 548 RERGIRKIPGCSWI 561


>emb|CAN66059.1| hypothetical protein VITISV_017037 [Vitis vinifera]
          Length = 546

 Score =  116 bits (291), Expect = 7e-24
 Identities = 54/74 (72%), Positives = 62/74 (83%)
 Frame = -2

Query: 957 GAWGALLGACNLHCDLELGEKVARRLIELEPLNSGNYVMLSSIYAAANRWSAVSDLMIKM 778
           GAWGALLGAC LHCD+ELGE VA +L ELEP N+GNYV+LS+IYAAA +W  VS L  KM
Sbjct: 473 GAWGALLGACKLHCDIELGEVVADQLFELEPQNAGNYVLLSNIYAAAEQWLDVSLLRNKM 532

Query: 777 NERGLKKIPGCSWI 736
            ERG++KIPGCSWI
Sbjct: 533 RERGIRKIPGCSWI 546


>ref|XP_004143391.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g37570-like [Cucumis sativus]
           gi|449519310|ref|XP_004166678.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At5g37570-like [Cucumis sativus]
          Length = 565

 Score =  115 bits (289), Expect = 1e-23
 Identities = 54/74 (72%), Positives = 63/74 (85%)
 Frame = -2

Query: 957 GAWGALLGACNLHCDLELGEKVARRLIELEPLNSGNYVMLSSIYAAANRWSAVSDLMIKM 778
           GAWGALLGAC L+CD EL E VA RLIE+EP N+GNYV+LS+IYAAA+RW  VS +  +M
Sbjct: 492 GAWGALLGACKLYCDSELAEVVASRLIEIEPENAGNYVLLSNIYAAADRWLDVSAVRNQM 551

Query: 777 NERGLKKIPGCSWI 736
           NERGL+KIPGCSWI
Sbjct: 552 NERGLRKIPGCSWI 565


>ref|XP_002309408.1| predicted protein [Populus trichocarpa] gi|222855384|gb|EEE92931.1|
           predicted protein [Populus trichocarpa]
          Length = 547

 Score =  101 bits (251), Expect = 3e-19
 Identities = 47/73 (64%), Positives = 61/73 (83%)
 Frame = -2

Query: 954 AWGALLGACNLHCDLELGEKVARRLIELEPLNSGNYVMLSSIYAAANRWSAVSDLMIKMN 775
           AWGALLGAC LH D+EL E+VA RL+ELEP  +G+YV+LS+IYA+AN+W  VS +  +M 
Sbjct: 471 AWGALLGACKLHGDVELREEVANRLLELEPEKAGSYVLLSNIYASANQWLDVSIVRDEMK 530

Query: 774 ERGLKKIPGCSWI 736
           ERG++KIPGCS+I
Sbjct: 531 ERGIRKIPGCSYI 543


Top