BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00032497
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT38805.1| hypothetical protein SDM1_47t00008 [Solanum demis...    66   3e-09
gb|AAN05532.1| putative reverse transcriptase [Oryza sativa Japo...    65   4e-09
gb|AAP53786.1| retrotransposon protein, putative, LINE subclass ...    62   9e-09
gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptas...    59   3e-07
ref|XP_002459639.1| hypothetical protein SORBIDRAFT_02g007880 [S...    59   4e-07

>gb|AAT38805.1| hypothetical protein SDM1_47t00008 [Solanum demissum]
          Length = 1155

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 34/112 (30%), Positives = 57/112 (50%)
 Frame = +1

Query: 4   VVFTRGTRGSIRKHFTVFGDFATASGQKANLQKSSFIISKHAQQQQIRWITQFTGV*RTT 183
           ++F  G++ ++         +   SGQ  N  KS F ++ +A+Q  I  I   T +    
Sbjct: 607 ILFCNGSKETLEMFLRTLHIYENTSGQLINKNKSCFSVANNAKQNFIAKIKLITCMNHQE 666

Query: 184 IPLRYLGHLLFKGHKKIYYFYPVFDKFKNKLAGWQSQMLKAGRRVIPIRHVL 339
            P++YLG  L  G KK  +F  +     N++ GW +++L  G RV+ I+HVL
Sbjct: 667 FPIKYLGCPLISGKKKTSHFNELVKNIINRIKGWHNKLLSTGGRVVLIKHVL 718


>gb|AAN05532.1| putative reverse transcriptase [Oryza sativa Japonica Group]
           gi|31432545|gb|AAP54167.1| retrotransposon protein,
           putative, unclassified [Oryza sativa Japonica Group]
          Length = 820

 Score = 64.7 bits (156), Expect(2) = 4e-09
 Identities = 38/118 (32%), Positives = 59/118 (50%)
 Frame = +1

Query: 7   VFTRGTRGSIRKHFTVFGDFATASGQKANLQKSSFIISKHAQQQQIRWITQFTGV*RTTI 186
           +F    R  +    ++   F  A+  + NL KSS +  K A+Q     +  F G  R   
Sbjct: 452 IFINSIRNDVNNLISILKFFGEATSLQVNLHKSSVVPIKCAEQNLSEVLENFNGQ-RGNF 510

Query: 187 PLRYLGHLLFKGHKKIYYFYPVFDKFKNKLAGWQSQMLKAGRRVIPIRHVLSTFFPTY 360
           P+ YLG  L  GH K  +  PV DK +++LAGW+ ++++   R   +  VLS+  PTY
Sbjct: 511 PITYLGLPLTPGHIKRIHLQPVMDKLQSRLAGWKGKLIQQSGRKTLVTSVLSS-IPTY 567



 Score = 20.8 bits (42), Expect(2) = 4e-09
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = +3

Query: 354 YIFLAMEPPRAVIKQLEQLCIKFL 425
           Y   A++PP+  +  + ++  KFL
Sbjct: 567 YFLTALKPPKQFLTDMNKIRKKFL 590


>gb|AAP53786.1| retrotransposon protein, putative, LINE subclass [Oryza sativa
           Japonica Group]
          Length = 419

 Score = 62.0 bits (149), Expect(2) = 9e-09
 Identities = 38/118 (32%), Positives = 59/118 (50%)
 Frame = +1

Query: 7   VFTRGTRGSIRKHFTVFGDFATASGQKANLQKSSFIISKHAQQQQIRWITQFTGV*RTTI 186
           +F    R  +    ++   F  A+G + NL KSS +  K A+Q     +  F G  R   
Sbjct: 101 IFINLIRNDVNNLISILKFFGEATGLQVNLHKSSVVPIKCAEQNLSEVLENFNGQ-RGNF 159

Query: 187 PLRYLGHLLFKGHKKIYYFYPVFDKFKNKLAGWQSQMLKAGRRVIPIRHVLSTFFPTY 360
           P+ YLG  L  G  K  +  PV DK +++LAGW+ ++++   R   +  VLS+  PTY
Sbjct: 160 PITYLGLPLTPGRIKRIHLQPVMDKLQSRLAGWKRKLIQQSGRKTLVTSVLSS-IPTY 216



 Score = 22.3 bits (46), Expect(2) = 9e-09
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = +3

Query: 354 YIFLAMEPPRAVIKQLEQLCIKFL 425
           Y   A++PP+  +  ++++  KFL
Sbjct: 216 YFLTALKPPKQFLTDMDKISKKFL 239


>gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 642

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 36/115 (31%), Positives = 60/115 (52%)
 Frame = +1

Query: 1   LVVFTRGTRGSIRKHFTVFGDFATASGQKANLQKSSFIISKHAQQQQIRWITQFTGV*RT 180
           L+VF +    S+    ++F  +A  SGQ  N++KS FI +      ++  I    G    
Sbjct: 432 LMVFCKAKMSSLIVLKSLFTRYADCSGQIMNIRKS-FIFAGGITDTRMNNIVNILGFNVG 490

Query: 181 TIPLRYLGHLLFKGHKKIYYFYPVFDKFKNKLAGWQSQMLKAGRRVIPIRHVLST 345
           ++P  YLG  +FKG  K  +F P+ DK K KLA W++ +L    R+  ++ V+ +
Sbjct: 491 SLPFTYLGAPIFKGKPKGIHFQPIADKVKAKLAKWKASLLSIAGRIQLVKSVVQS 545


>ref|XP_002459639.1| hypothetical protein SORBIDRAFT_02g007880 [Sorghum bicolor]
           gi|241923016|gb|EER96160.1| hypothetical protein
           SORBIDRAFT_02g007880 [Sorghum bicolor]
          Length = 475

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 41/120 (34%), Positives = 62/120 (51%), Gaps = 1/120 (0%)
 Frame = +1

Query: 4   VVFTRGTRGSIRKHFTVFGDFATASGQKANLQKSSFIISKHAQQQQIRWITQFTGV*RTT 183
           V+F    +  ++  F +   F +A+G K NL+K S    + A     + +  F G  R +
Sbjct: 65  VIFINPVKEEVQALFGILEQFGSATGLKLNLEKCSVAPIRCAGTNLDQILESFVGK-RVS 123

Query: 184 IPLRYLGHLLFKGHKKIYYFYPVFDKFKNKLAGWQSQMLK-AGRRVIPIRHVLSTFFPTY 360
            P+ YLG  L  G  K+ +     DK + KLAGWQ ++L  AGRR + +  VLS+  PTY
Sbjct: 124 FPITYLGLPLTLGRLKMVHVQGTVDKSRTKLAGWQGRLLNPAGRREL-VSSVLSS-IPTY 181