BLASTX nr result

ID: Cephaelis21_contig00032462 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00032462
         (626 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522772.1| ribosomal RNA small subunit methyltransferas...   217   1e-54
ref|XP_002266112.1| PREDICTED: ribosomal RNA small subunit methy...   212   4e-53
emb|CAN67145.1| hypothetical protein VITISV_042360 [Vitis vinifera]   212   4e-53
ref|XP_002300381.1| predicted protein [Populus trichocarpa] gi|2...   205   6e-51
ref|XP_003519634.1| PREDICTED: ribosomal RNA small subunit methy...   204   8e-51

>ref|XP_002522772.1| ribosomal RNA small subunit methyltransferase B, putative [Ricinus
           communis] gi|223538010|gb|EEF39623.1| ribosomal RNA
           small subunit methyltransferase B, putative [Ricinus
           communis]
          Length = 527

 Score =  217 bits (553), Expect = 1e-54
 Identities = 107/162 (66%), Positives = 131/162 (80%)
 Frame = -3

Query: 486 NSATTSRSSTVKFAGKTPQPNPATASTRTGPLNSASKAKKVNLEVSPHRAVCAVRLMRIQ 307
           +++ T+R   +KF+ +  +P  + ++ R GP++   K +K+NLEVSPHRAV AVRLMRI+
Sbjct: 14  DTSKTARCMPLKFSKRANKPKKSLSAPRKGPVSPLKKTQKLNLEVSPHRAVSAVRLMRIE 73

Query: 306 LGGAFADLLNEQGKGSGDNEMGYVERTLGFRTXXXXXXXXXLVTDIVGGTIRWRRYLDYL 127
           +GGAFADLLNE+GKGSG+NEMGYVERTLGFRT         LVTD+VGGTIRWRR+LD+L
Sbjct: 74  MGGAFADLLNEKGKGSGENEMGYVERTLGFRTKNLDDRDLRLVTDVVGGTIRWRRFLDHL 133

Query: 126 IFSLCHDEGTFRGMEPLLLQILRIGFYEIIKLEMPPYAVVDE 1
           I SL HDE TFR MEPLLLQILRIG YEI+KL+MPPYAVVDE
Sbjct: 134 ICSLFHDENTFRSMEPLLLQILRIGAYEIVKLDMPPYAVVDE 175


>ref|XP_002266112.1| PREDICTED: ribosomal RNA small subunit methyltransferase B [Vitis
           vinifera] gi|296089930|emb|CBI39749.3| unnamed protein
           product [Vitis vinifera]
          Length = 525

 Score =  212 bits (540), Expect = 4e-53
 Identities = 108/156 (69%), Positives = 122/156 (78%)
 Frame = -3

Query: 468 RSSTVKFAGKTPQPNPATASTRTGPLNSASKAKKVNLEVSPHRAVCAVRLMRIQLGGAFA 289
           R+S+        +PN A  +  TG   +A++   VNLE+SPHRAV AVRLMRI+LGGAFA
Sbjct: 18  RTSSKPLKVAKTRPNTAIPTRSTGTRRNANRTYGVNLEISPHRAVSAVRLMRIELGGAFA 77

Query: 288 DLLNEQGKGSGDNEMGYVERTLGFRTXXXXXXXXXLVTDIVGGTIRWRRYLDYLIFSLCH 109
           DLLNE+GKGSGDNEMGYVERTLGFRT         LVTDIVGG+IRWRRYLD+LI SLCH
Sbjct: 78  DLLNERGKGSGDNEMGYVERTLGFRTRDLDDRDLRLVTDIVGGSIRWRRYLDHLIVSLCH 137

Query: 108 DEGTFRGMEPLLLQILRIGFYEIIKLEMPPYAVVDE 1
           D  TFR MEPLLLQILRIGFYEI+ L+MPPYAVVDE
Sbjct: 138 DSKTFRSMEPLLLQILRIGFYEIVNLDMPPYAVVDE 173


>emb|CAN67145.1| hypothetical protein VITISV_042360 [Vitis vinifera]
          Length = 324

 Score =  212 bits (540), Expect = 4e-53
 Identities = 108/156 (69%), Positives = 122/156 (78%)
 Frame = -3

Query: 468 RSSTVKFAGKTPQPNPATASTRTGPLNSASKAKKVNLEVSPHRAVCAVRLMRIQLGGAFA 289
           R+S+        +PN A  +  TG   +A++   VNLE+SPHRAV AVRLMRI+LGGAFA
Sbjct: 18  RTSSKPLKVAKTRPNTAIPTRSTGTRRNANRTYGVNLEISPHRAVSAVRLMRIELGGAFA 77

Query: 288 DLLNEQGKGSGDNEMGYVERTLGFRTXXXXXXXXXLVTDIVGGTIRWRRYLDYLIFSLCH 109
           DLLNE+GKGSGDNEMGYVERTLGFRT         LVTDIVGG+IRWRRYLD+LI SLCH
Sbjct: 78  DLLNERGKGSGDNEMGYVERTLGFRTRDLDDRDLRLVTDIVGGSIRWRRYLDHLIVSLCH 137

Query: 108 DEGTFRGMEPLLLQILRIGFYEIIKLEMPPYAVVDE 1
           D  TFR MEPLLLQILRIGFYEI+ L+MPPYAVVDE
Sbjct: 138 DSKTFRSMEPLLLQILRIGFYEIVNLDMPPYAVVDE 173


>ref|XP_002300381.1| predicted protein [Populus trichocarpa] gi|222847639|gb|EEE85186.1|
           predicted protein [Populus trichocarpa]
          Length = 527

 Score =  205 bits (521), Expect = 6e-51
 Identities = 102/132 (77%), Positives = 112/132 (84%)
 Frame = -3

Query: 396 PLNSASKAKKVNLEVSPHRAVCAVRLMRIQLGGAFADLLNEQGKGSGDNEMGYVERTLGF 217
           P +   K +K+NL+VSPHRAV AVRLMRI++GGAFADLLN++GKGSGDNEMGYVERTLGF
Sbjct: 44  PQSPLRKTQKLNLQVSPHRAVSAVRLMRIEMGGAFADLLNDKGKGSGDNEMGYVERTLGF 103

Query: 216 RTXXXXXXXXXLVTDIVGGTIRWRRYLDYLIFSLCHDEGTFRGMEPLLLQILRIGFYEII 37
           RT         LVTDIVGGTIRWRRYLDYLI SLCHDE  FR MEPLLLQILRIGFYEI+
Sbjct: 104 RTKDLDDRDLRLVTDIVGGTIRWRRYLDYLIGSLCHDEKAFRSMEPLLLQILRIGFYEIV 163

Query: 36  KLEMPPYAVVDE 1
           KL+MP YAVVDE
Sbjct: 164 KLDMPSYAVVDE 175


>ref|XP_003519634.1| PREDICTED: ribosomal RNA small subunit methyltransferase B-like
           [Glycine max]
          Length = 528

 Score =  204 bits (520), Expect = 8e-51
 Identities = 108/162 (66%), Positives = 125/162 (77%)
 Frame = -3

Query: 486 NSATTSRSSTVKFAGKTPQPNPATASTRTGPLNSASKAKKVNLEVSPHRAVCAVRLMRIQ 307
           +S+++S S  +K   +T   N +  ST  G  N   K +K+N EVSPHRAV AVRLMRI+
Sbjct: 16  SSSSSSPSKPLKLPHRTCSTNISIPSTAKGGGNRLLKTQKLNSEVSPHRAVSAVRLMRIE 75

Query: 306 LGGAFADLLNEQGKGSGDNEMGYVERTLGFRTXXXXXXXXXLVTDIVGGTIRWRRYLDYL 127
           LGGAFADLLNE+GKGSG+NEMGYV+RTLGFRT         LVTDIVGGTIRWRRYLD+L
Sbjct: 76  LGGAFADLLNEKGKGSGENEMGYVQRTLGFRTRELNHHDLRLVTDIVGGTIRWRRYLDHL 135

Query: 126 IFSLCHDEGTFRGMEPLLLQILRIGFYEIIKLEMPPYAVVDE 1
           I SLCHD+     MEPLLLQILRIGFYEI+KL+MPPYAVVDE
Sbjct: 136 ISSLCHDK-DISSMEPLLLQILRIGFYEIVKLDMPPYAVVDE 176


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