BLASTX nr result

ID: Cephaelis21_contig00032261 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00032261
         (497 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004146887.1| PREDICTED: 60S ribosomal protein L13-2-like ...    72   6e-14
ref|XP_004143667.1| PREDICTED: 60S ribosomal protein L13-1-like ...    72   6e-14
ref|XP_002519996.1| 60S ribosomal protein L13, putative [Ricinus...    70   3e-13
gb|ACU14467.1| unknown [Glycine max]                                   70   5e-13
gb|AFK39980.1| unknown [Lotus japonicus]                               70   5e-13

>ref|XP_004146887.1| PREDICTED: 60S ribosomal protein L13-2-like isoform 1 [Cucumis
           sativus] gi|449458305|ref|XP_004146888.1| PREDICTED: 60S
           ribosomal protein L13-2-like isoform 2 [Cucumis sativus]
           gi|449513147|ref|XP_004164245.1| PREDICTED: 60S
           ribosomal protein L13-2-like isoform 1 [Cucumis sativus]
           gi|449513151|ref|XP_004164246.1| PREDICTED: 60S
           ribosomal protein L13-2-like isoform 2 [Cucumis sativus]
          Length = 206

 Score = 71.6 bits (174), Expect(2) = 6e-14
 Identities = 29/36 (80%), Positives = 33/36 (91%)
 Frame = +1

Query: 334 VKHNNMVPSAHFRKTWQNYVKTWFNQPARKTRRCNA 441
           +KHNN++PS HFRK WQNYV+TWFNQPARKTRR NA
Sbjct: 1   MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNA 36



 Score = 30.4 bits (67), Expect(2) = 6e-14
 Identities = 13/15 (86%), Positives = 13/15 (86%)
 Frame = +3

Query: 453 RQEKAVMTFPRPTAG 497
           RQEKAV  FPRPTAG
Sbjct: 37  RQEKAVKNFPRPTAG 51


>ref|XP_004143667.1| PREDICTED: 60S ribosomal protein L13-1-like [Cucumis sativus]
           gi|449488615|ref|XP_004158113.1| PREDICTED: 60S
           ribosomal protein L13-1-like [Cucumis sativus]
          Length = 206

 Score = 71.6 bits (174), Expect(2) = 6e-14
 Identities = 29/36 (80%), Positives = 33/36 (91%)
 Frame = +1

Query: 334 VKHNNMVPSAHFRKTWQNYVKTWFNQPARKTRRCNA 441
           +KHNN++PS HFRK WQNYV+TWFNQPARKTRR NA
Sbjct: 1   MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNA 36



 Score = 30.4 bits (67), Expect(2) = 6e-14
 Identities = 13/15 (86%), Positives = 13/15 (86%)
 Frame = +3

Query: 453 RQEKAVMTFPRPTAG 497
           RQEKAV  FPRPTAG
Sbjct: 37  RQEKAVKAFPRPTAG 51


>ref|XP_002519996.1| 60S ribosomal protein L13, putative [Ricinus communis]
           gi|223540760|gb|EEF42320.1| 60S ribosomal protein L13,
           putative [Ricinus communis]
          Length = 207

 Score = 69.7 bits (169), Expect(2) = 3e-13
 Identities = 28/34 (82%), Positives = 32/34 (94%)
 Frame = +1

Query: 331 IVKHNNMVPSAHFRKTWQNYVKTWFNQPARKTRR 432
           +VKHNN+VP+ HF+K WQNYVKTWFNQPARKTRR
Sbjct: 1   MVKHNNVVPNGHFKKHWQNYVKTWFNQPARKTRR 34



 Score = 30.0 bits (66), Expect(2) = 3e-13
 Identities = 13/17 (76%), Positives = 14/17 (82%)
 Frame = +3

Query: 447 ATRQEKAVMTFPRPTAG 497
           A RQ+KAV  FPRPTAG
Sbjct: 36  AARQKKAVKIFPRPTAG 52


>gb|ACU14467.1| unknown [Glycine max]
          Length = 231

 Score = 70.5 bits (171), Expect(2) = 5e-13
 Identities = 28/34 (82%), Positives = 32/34 (94%)
 Frame = +1

Query: 331 IVKHNNMVPSAHFRKTWQNYVKTWFNQPARKTRR 432
           +VKHNN++P+ HFRK WQNYVKTWFNQPARKTRR
Sbjct: 1   MVKHNNVIPNGHFRKHWQNYVKTWFNQPARKTRR 34



 Score = 28.5 bits (62), Expect(2) = 5e-13
 Identities = 12/15 (80%), Positives = 13/15 (86%)
 Frame = +3

Query: 453 RQEKAVMTFPRPTAG 497
           RQ+KAV  FPRPTAG
Sbjct: 38  RQKKAVKIFPRPTAG 52


>gb|AFK39980.1| unknown [Lotus japonicus]
          Length = 207

 Score = 70.5 bits (171), Expect(2) = 5e-13
 Identities = 28/34 (82%), Positives = 32/34 (94%)
 Frame = +1

Query: 331 IVKHNNMVPSAHFRKTWQNYVKTWFNQPARKTRR 432
           +VKHNN++P+ HFRK WQNYVKTWFNQPARKTRR
Sbjct: 1   MVKHNNVIPNGHFRKHWQNYVKTWFNQPARKTRR 34



 Score = 28.5 bits (62), Expect(2) = 5e-13
 Identities = 12/15 (80%), Positives = 13/15 (86%)
 Frame = +3

Query: 453 RQEKAVMTFPRPTAG 497
           RQ+KAV  FPRPTAG
Sbjct: 38  RQKKAVKIFPRPTAG 52


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