BLASTX nr result

ID: Cephaelis21_contig00032163 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00032163
         (254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi...    95   7e-18
gb|AAO00713.1| retrotransposon protein, putative, unclassified [...    94   1e-17
gb|AAP54692.2| retrotransposon protein, putative, unclassified [...    94   1e-17
dbj|BAM28750.1| reverse transcriptase-like protein, partial [Cam...    93   3e-17
gb|EEC83784.1| hypothetical protein OsI_29682 [Oryza sativa Indi...    93   3e-17

>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
            (fragment)
          Length = 1365

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 35/77 (45%), Positives = 59/77 (76%)
 Frame = -1

Query: 245  KVFIKSVLMALPVYVMSCYRIPNKILKEVSSMISQFWWNREEGHRKVHWLAWKEVTKAKD 66
            +V +KS+ +ALPVYVMSC+++P  + +++++++  FWWN  +  RK+HWL+W+ +T  KD
Sbjct: 789  EVLLKSIALALPVYVMSCFKLPKNLCQKLTTVMMDFWWNSMQQKRKIHWLSWQRLTLPKD 848

Query: 65   EGGLGFKELRASNDALI 15
            +GG GFK+L+  N AL+
Sbjct: 849  QGGFGFKDLQCFNQALL 865


>gb|AAO00713.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1557

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 37/77 (48%), Positives = 56/77 (72%)
 Frame = -1

Query: 245  KVFIKSVLMALPVYVMSCYRIPNKILKEVSSMISQFWWNREEGHRKVHWLAWKEVTKAKD 66
            +V IK+V+ A+PVYVM  +++P  + ++++S+   FWW  E+G RK HW AWK +TK+K 
Sbjct: 1159 EVLIKAVIQAIPVYVMGIFKLPESVCEDLTSLTRNFWWGAEKGKRKTHWKAWKSLTKSKS 1218

Query: 65   EGGLGFKELRASNDALI 15
             GGLGFK++R  N AL+
Sbjct: 1219 LGGLGFKDIRLFNQALL 1235


>gb|AAP54692.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1585

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 37/77 (48%), Positives = 56/77 (72%)
 Frame = -1

Query: 245  KVFIKSVLMALPVYVMSCYRIPNKILKEVSSMISQFWWNREEGHRKVHWLAWKEVTKAKD 66
            +V IK+V+ A+PVYVM  +++P  + ++++S+   FWW  E+G RK HW AWK +TK+K 
Sbjct: 1187 EVLIKAVIQAIPVYVMGIFKLPESVCEDLTSLTRNFWWGAEKGKRKTHWKAWKSLTKSKS 1246

Query: 65   EGGLGFKELRASNDALI 15
             GGLGFK++R  N AL+
Sbjct: 1247 LGGLGFKDIRLFNQALL 1263


>dbj|BAM28750.1| reverse transcriptase-like protein, partial [Camellia sinensis var.
           sinensis]
          Length = 255

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 36/77 (46%), Positives = 57/77 (74%)
 Frame = -1

Query: 245 KVFIKSVLMALPVYVMSCYRIPNKILKEVSSMISQFWWNREEGHRKVHWLAWKEVTKAKD 66
           +V IKSV  A+P Y+MSC+R+P+ +  E+ SM+  FWW ++E  RK+HW +WK++ K+K 
Sbjct: 39  EVLIKSVAQAIPTYIMSCFRLPDGVCHEIESMVCNFWWXQKEETRKIHWTSWKQLCKSKL 98

Query: 65  EGGLGFKELRASNDALI 15
           +GG+GF+ L+  N AL+
Sbjct: 99  QGGMGFRCLQXFNSALL 115


>gb|EEC83784.1| hypothetical protein OsI_29682 [Oryza sativa Indica Group]
          Length = 666

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 35/77 (45%), Positives = 58/77 (75%)
 Frame = -1

Query: 245 KVFIKSVLMALPVYVMSCYRIPNKILKEVSSMISQFWWNREEGHRKVHWLAWKEVTKAKD 66
           +V IK++  A+PVYVM  +++P+ + +E++ +I  FWW  + G RKVHW AW ++TK+K+
Sbjct: 144 EVMIKAIAQAIPVYVMGVFKLPDGVCEELTKIIRNFWWGSDNGKRKVHWKAWSQLTKSKN 203

Query: 65  EGGLGFKELRASNDALI 15
            GGLGF++++A N AL+
Sbjct: 204 AGGLGFRDMKAFNQALL 220


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