BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00032143
         (441 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282614.1| PREDICTED: RNA pseudourine synthase 4, mitoc...   101   6e-20
ref|XP_004170490.1| PREDICTED: RNA pseudourine synthase 4, mitoc...    99   3e-19
ref|XP_002518674.1| ribosomal pseudouridine synthase, putative [...    99   4e-19
ref|XP_004137095.1| PREDICTED: RNA pseudourine synthase 4, mitoc...    95   5e-18
ref|NP_188575.1| RNA pseudourine synthase 4 [Arabidopsis thalian...    86   4e-15

>ref|XP_002282614.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial [Vitis
           vinifera] gi|296090438|emb|CBI40257.3| unnamed protein
           product [Vitis vinifera]
          Length = 476

 Score =  101 bits (252), Expect = 6e-20
 Identities = 62/123 (50%), Positives = 76/123 (61%), Gaps = 10/123 (8%)
 Frame = -1

Query: 339 ERLCPYGSSTTVEKEFLNDKKNTKQDDKWFTLPPFTPAADGASLGKTLA-RKTKKQA--S 169
           +R C + +S     E    KK      KWFTLP FTP  D +SLGK L+  +T      +
Sbjct: 34  QRSC-FATSNDAVSEAHKSKKG-----KWFTLPAFTPVVDASSLGKVLSGHRTDLNTGNT 87

Query: 168 AAVPTVTVLKWVLRCCPELPRSLVQKLFRLRRVRRDSCN-------VQFQGRQLKRVSAK 10
            A  + T LKWV+RCCP+LPRSLVQKLFRLR+VRR+S N       VQ Q  +LKRV+AK
Sbjct: 88  TAGASTTALKWVVRCCPQLPRSLVQKLFRLRQVRRESYNMITSDIGVQNQEHRLKRVAAK 147

Query: 9   DLM 1
           DLM
Sbjct: 148 DLM 150


>ref|XP_004170490.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Cucumis
           sativus]
          Length = 471

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 51/106 (48%), Positives = 72/106 (67%), Gaps = 7/106 (6%)
 Frame = -1

Query: 297 EFLNDKKNTKQDDKWFTLPPFTPAADGASLGKTLARKT-KKQASAAVPTVTVLKWVLRCC 121
           E ++ +KN K  ++WFTLPP+T   +G+ LG  +     + +  A+   +T LKWV+RCC
Sbjct: 46  EPVSQQKNEKGSNRWFTLPPYTATVNGSILGNRIMNGGGQAELGASTAAITALKWVIRCC 105

Query: 120 PELPRSLVQKLFRLRRVRRDSCNVQ-----FQGR-QLKRVSAKDLM 1
           PELPRSLVQKLFRLR+VRR S  ++      + R QLKRV+AKD++
Sbjct: 106 PELPRSLVQKLFRLRKVRRGSSMIENSEYNLEARDQLKRVAAKDIL 151


>ref|XP_002518674.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
           gi|223542055|gb|EEF43599.1| ribosomal pseudouridine
           synthase, putative [Ricinus communis]
          Length = 536

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 53/96 (55%), Positives = 65/96 (67%), Gaps = 2/96 (2%)
 Frame = -1

Query: 282 KKNTKQDDKWFTLPPFTPAADGASLGKTLARKTKKQASAAVPTVTVLKWVLRCCPELPRS 103
           K NTK   K+FTLPP+T    G++LGK L+     +AS      T LKWVLRCCPELPR+
Sbjct: 119 KNNTKNTGKFFTLPPYTSTISGSALGKALSATATAKASTET---TALKWVLRCCPELPRN 175

Query: 102 LVQKLFRLRRVRRDSCNV--QFQGRQLKRVSAKDLM 1
           LVQKLFRLR+V+R+  NV       + KRV+AKDLM
Sbjct: 176 LVQKLFRLRQVKRELLNVGDGEMEHKTKRVAAKDLM 211


>ref|XP_004137095.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Cucumis
           sativus]
          Length = 466

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 48/101 (47%), Positives = 67/101 (66%), Gaps = 2/101 (1%)
 Frame = -1

Query: 297 EFLNDKKNTKQDDKWFTLPPFTPAADGASLGKTLARKT-KKQASAAVPTVTVLKWVLRCC 121
           E ++ +KN K  ++WFTLPP+T   +G+ LG  +     + +  A+   +T LKWV+RCC
Sbjct: 46  EPVSQQKNEKGSNRWFTLPPYTATVNGSILGNRIMNGGGQAELGASTAAITALKWVIRCC 105

Query: 120 PELPRSLVQKLFRLRRVRRD-SCNVQFQGRQLKRVSAKDLM 1
           PELPRSLVQKLFRLR+V R  +        QLKRV+AKD++
Sbjct: 106 PELPRSLVQKLFRLRKVPRQLNVGCGNSHHQLKRVAAKDIL 146


>ref|NP_188575.1| RNA pseudourine synthase 4 [Arabidopsis thaliana]
           gi|75274073|sp|Q9LT72.1|PUS4_ARATH RecName: Full=RNA
           pseudourine synthase 4, mitochondrial; AltName: Full=RNA
           pseudouridylate synthase 4; AltName: Full=RNA-uridine
           isomerase 4; Flags: Precursor
           gi|11994467|dbj|BAB02469.1| unnamed protein product
           [Arabidopsis thaliana] gi|110737723|dbj|BAF00800.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|134031916|gb|ABO45695.1| At3g19440 [Arabidopsis
           thaliana] gi|332642719|gb|AEE76240.1| RNA pseudourine
           synthase 4 [Arabidopsis thaliana]
          Length = 477

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 49/97 (50%), Positives = 65/97 (67%), Gaps = 8/97 (8%)
 Frame = -1

Query: 273 TKQDD---KWFTLPPFTPAADGASLGKTLARKTKK-QASAAVPTVTVLKWVLRCCPELPR 106
           T+ DD   KW TLPPF+P  DG ++GK L       ++S      T L+W+LRC P+LPR
Sbjct: 46  TQTDDSRGKWLTLPPFSPTIDGTAVGKDLLSDGDSVKSSTDNSKTTALRWILRCRPDLPR 105

Query: 105 SLVQKLFRLRRVRRD-SCNV---QFQGRQLKRVSAKD 7
           +LVQKLFRLR+VRR+ S +V   + Q  QLKRV+AK+
Sbjct: 106 TLVQKLFRLRQVRREMSMSVDGDELQRSQLKRVAAKE 142