BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00032142
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282614.1| PREDICTED: RNA pseudourine synthase 4, mitoc...   118   6e-25
ref|NP_188575.1| RNA pseudourine synthase 4 [Arabidopsis thalian...   106   2e-21
ref|XP_002883182.1| pseudouridine synthase family protein [Arabi...   105   4e-21
ref|XP_004170490.1| PREDICTED: RNA pseudourine synthase 4, mitoc...   103   1e-20
ref|XP_004137095.1| PREDICTED: RNA pseudourine synthase 4, mitoc...   103   1e-20

>ref|XP_002282614.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial [Vitis
           vinifera] gi|296090438|emb|CBI40257.3| unnamed protein
           product [Vitis vinifera]
          Length = 476

 Score =  118 bits (295), Expect = 6e-25
 Identities = 62/92 (67%), Positives = 74/92 (80%)
 Frame = -2

Query: 276 VSAKDLMNSGDRIFLPVTIEKKLPSAKAEAEYTFNEEELKFLRSLILHKDPAIIVVNKPH 97
           V+AKDLMN GD+I LP+T+E+  PS K E  Y  N+EE+ F+ +L L+KDPAIIVVNKP 
Sbjct: 144 VAAKDLMNLGDQILLPITVEE-FPSEKHE--YHCNDEEINFVHNLELYKDPAIIVVNKPP 200

Query: 96  GMPVQGGIGIKRSLDELAAQYFRFDNSESPRL 1
           G+PVQGGIGIKRSLDELAA Y R+D SE PRL
Sbjct: 201 GLPVQGGIGIKRSLDELAATYLRYDCSEPPRL 232


>ref|NP_188575.1| RNA pseudourine synthase 4 [Arabidopsis thaliana]
           gi|75274073|sp|Q9LT72.1|PUS4_ARATH RecName: Full=RNA
           pseudourine synthase 4, mitochondrial; AltName: Full=RNA
           pseudouridylate synthase 4; AltName: Full=RNA-uridine
           isomerase 4; Flags: Precursor
           gi|11994467|dbj|BAB02469.1| unnamed protein product
           [Arabidopsis thaliana] gi|110737723|dbj|BAF00800.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|134031916|gb|ABO45695.1| At3g19440 [Arabidopsis
           thaliana] gi|332642719|gb|AEE76240.1| RNA pseudourine
           synthase 4 [Arabidopsis thaliana]
          Length = 477

 Score =  106 bits (264), Expect = 2e-21
 Identities = 52/94 (55%), Positives = 71/94 (75%), Gaps = 2/94 (2%)
 Frame = -2

Query: 276 VSAKDLMNSGDRIFLPVTIEKKLPSAKAEAEYTF--NEEELKFLRSLILHKDPAIIVVNK 103
           V+AK+ +N GDRI+LP++++   P      + +F  ++EE KF+ SL+L+KDPAIIV+NK
Sbjct: 138 VAAKESLNVGDRIYLPLSVDNDTPQTPPAKKESFQCSDEERKFVCSLVLYKDPAIIVLNK 197

Query: 102 PHGMPVQGGIGIKRSLDELAAQYFRFDNSESPRL 1
           PHG+ VQGG GIK S+DELAA   +FD SESPRL
Sbjct: 198 PHGLAVQGGSGIKTSIDELAASCLKFDKSESPRL 231


>ref|XP_002883182.1| pseudouridine synthase family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297329022|gb|EFH59441.1| pseudouridine
           synthase family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 477

 Score =  105 bits (262), Expect = 4e-21
 Identities = 53/94 (56%), Positives = 70/94 (74%), Gaps = 2/94 (2%)
 Frame = -2

Query: 276 VSAKDLMNSGDRIFLPVTIEKKLPSAKAEAEYTF--NEEELKFLRSLILHKDPAIIVVNK 103
           V+AK+ +N GDRI+LP++++   P      + +F  +EEE KF+ SL+L+KDPAIIV+NK
Sbjct: 138 VAAKESLNVGDRIYLPLSVDNDTPPTPPAKKESFQCSEEERKFVCSLVLYKDPAIIVLNK 197

Query: 102 PHGMPVQGGIGIKRSLDELAAQYFRFDNSESPRL 1
           PHG+ VQGG GIK S+DELAA    FD SESPRL
Sbjct: 198 PHGLAVQGGSGIKTSIDELAATCLTFDKSESPRL 231


>ref|XP_004170490.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Cucumis
           sativus]
          Length = 471

 Score =  103 bits (257), Expect = 1e-20
 Identities = 52/92 (56%), Positives = 71/92 (77%)
 Frame = -2

Query: 276 VSAKDLMNSGDRIFLPVTIEKKLPSAKAEAEYTFNEEELKFLRSLILHKDPAIIVVNKPH 97
           V+AKD++N GD+IFLP++++  + S +   +Y  N+EE  F+ SL+LHKDPAI+V+NKP 
Sbjct: 145 VAAKDILNVGDQIFLPMSVQ--VFSTEKTRDYC-NKEEETFMHSLVLHKDPAILVINKPP 201

Query: 96  GMPVQGGIGIKRSLDELAAQYFRFDNSESPRL 1
           G+PVQGGIG+KRSLDELAA    +  SE PRL
Sbjct: 202 GLPVQGGIGVKRSLDELAASCLSYGYSEPPRL 233


>ref|XP_004137095.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Cucumis
           sativus]
          Length = 466

 Score =  103 bits (257), Expect = 1e-20
 Identities = 52/92 (56%), Positives = 71/92 (77%)
 Frame = -2

Query: 276 VSAKDLMNSGDRIFLPVTIEKKLPSAKAEAEYTFNEEELKFLRSLILHKDPAIIVVNKPH 97
           V+AKD++N GD+IFLP++++  + S +   +Y  N+EE  F+ SL+LHKDPAI+V+NKP 
Sbjct: 140 VAAKDILNVGDQIFLPMSVQ--VFSTEKTRDYC-NKEEETFMHSLVLHKDPAILVINKPP 196

Query: 96  GMPVQGGIGIKRSLDELAAQYFRFDNSESPRL 1
           G+PVQGGIG+KRSLDELAA    +  SE PRL
Sbjct: 197 GLPVQGGIGVKRSLDELAASCLSYGYSEPPRL 228