BLASTX nr result
ID: Cephaelis21_contig00032136
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cephaelis21_contig00032136 (308 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002320500.1| predicted protein [Populus trichocarpa] gi|2... 69 3e-10 ref|XP_002264290.1| PREDICTED: transcription initiation factor T... 65 4e-09 ref|NP_171987.1| transcription initiation factor TFIID subunit D... 65 6e-09 dbj|BAH20105.1| AT1G04950 [Arabidopsis thaliana] 65 6e-09 dbj|BAH19928.1| AT1G04950 [Arabidopsis thaliana] 65 6e-09 >ref|XP_002320500.1| predicted protein [Populus trichocarpa] gi|222861273|gb|EEE98815.1| predicted protein [Populus trichocarpa] Length = 532 Score = 69.3 bits (168), Expect = 3e-10 Identities = 32/46 (69%), Positives = 37/46 (80%) Frame = -1 Query: 254 DKQSSKTPALLDQAWKDDLDSGRLLVKLFELFGESIFPFIPTPEMA 117 D Q+ KT A+L Q WKDDL+SG LLV LFELFGESI FIP+PEM+ Sbjct: 484 DSQAIKTSAILSQVWKDDLNSGHLLVSLFELFGESILSFIPSPEMS 529 >ref|XP_002264290.1| PREDICTED: transcription initiation factor TFIID subunit 6 [Vitis vinifera] gi|297739126|emb|CBI28777.3| unnamed protein product [Vitis vinifera] Length = 543 Score = 65.5 bits (158), Expect = 4e-09 Identities = 30/46 (65%), Positives = 35/46 (76%) Frame = -1 Query: 254 DKQSSKTPALLDQAWKDDLDSGRLLVKLFELFGESIFPFIPTPEMA 117 D ++ K A+L Q W+DDL SG LLV LFELFGESI PFIP PEM+ Sbjct: 495 DSRALKMSAVLTQTWRDDLKSGHLLVSLFELFGESILPFIPAPEMS 540 >ref|NP_171987.1| transcription initiation factor TFIID subunit D5 [Arabidopsis thaliana] gi|30679057|ref|NP_849592.1| transcription initiation factor TFIID subunit D5 [Arabidopsis thaliana] gi|79316742|ref|NP_001030969.1| transcription initiation factor TFIID subunit D5 [Arabidopsis thaliana] gi|7211972|gb|AAF40443.1|AC004809_1 Strong similarity to the TATA binding protein-associated factor from A. thaliana gb|Y13673. ESTs gb|N38153 and gb|W43450 come from this gene [Arabidopsis thaliana] gi|15293057|gb|AAK93639.1| putative TATA binding protein-associated factor [Arabidopsis thaliana] gi|20259031|gb|AAM14231.1| putative TATA binding protein-associated factor [Arabidopsis thaliana] gi|39545920|gb|AAR28023.1| TAF6 [Arabidopsis thaliana] gi|332189645|gb|AEE27766.1| transcription initiation factor TFIID subunit D5 [Arabidopsis thaliana] gi|332189646|gb|AEE27767.1| transcription initiation factor TFIID subunit D5 [Arabidopsis thaliana] gi|332189647|gb|AEE27768.1| transcription initiation factor TFIID subunit D5 [Arabidopsis thaliana] Length = 549 Score = 65.1 bits (157), Expect = 6e-09 Identities = 33/67 (49%), Positives = 44/67 (65%), Gaps = 3/67 (4%) Frame = -1 Query: 308 AEEVQDAASKRRRRIQMLDKQSSKT---PALLDQAWKDDLDSGRLLVKLFELFGESIFPF 138 +E+ DA R ++ + S+ A+LDQ WKDDLDSGRLLVKL EL+G+ I PF Sbjct: 480 SEQASDANESESRNGKVKESGRSRAITMKAILDQIWKDDLDSGRLLVKLHELYGDRILPF 539 Query: 137 IPTPEMA 117 IP+ EM+ Sbjct: 540 IPSTEMS 546 >dbj|BAH20105.1| AT1G04950 [Arabidopsis thaliana] Length = 549 Score = 65.1 bits (157), Expect = 6e-09 Identities = 33/67 (49%), Positives = 44/67 (65%), Gaps = 3/67 (4%) Frame = -1 Query: 308 AEEVQDAASKRRRRIQMLDKQSSKT---PALLDQAWKDDLDSGRLLVKLFELFGESIFPF 138 +E+ DA R ++ + S+ A+LDQ WKDDLDSGRLLVKL EL+G+ I PF Sbjct: 480 SEQASDANESESRNGKVKESGRSRAITMKAILDQIWKDDLDSGRLLVKLHELYGDRILPF 539 Query: 137 IPTPEMA 117 IP+ EM+ Sbjct: 540 IPSTEMS 546 >dbj|BAH19928.1| AT1G04950 [Arabidopsis thaliana] Length = 549 Score = 65.1 bits (157), Expect = 6e-09 Identities = 33/67 (49%), Positives = 44/67 (65%), Gaps = 3/67 (4%) Frame = -1 Query: 308 AEEVQDAASKRRRRIQMLDKQSSKT---PALLDQAWKDDLDSGRLLVKLFELFGESIFPF 138 +E+ DA R ++ + S+ A+LDQ WKDDLDSGRLLVKL EL+G+ I PF Sbjct: 480 SEQASDANESESRNGKVKESGRSRAITMKAILDQIWKDDLDSGRLLVKLHELYGDRILPF 539 Query: 137 IPTPEMA 117 IP+ EM+ Sbjct: 540 IPSTEMS 546