BLASTX nr result

ID: Cephaelis21_contig00032136 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00032136
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320500.1| predicted protein [Populus trichocarpa] gi|2...    69   3e-10
ref|XP_002264290.1| PREDICTED: transcription initiation factor T...    65   4e-09
ref|NP_171987.1| transcription initiation factor TFIID subunit D...    65   6e-09
dbj|BAH20105.1| AT1G04950 [Arabidopsis thaliana]                       65   6e-09
dbj|BAH19928.1| AT1G04950 [Arabidopsis thaliana]                       65   6e-09

>ref|XP_002320500.1| predicted protein [Populus trichocarpa] gi|222861273|gb|EEE98815.1|
           predicted protein [Populus trichocarpa]
          Length = 532

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 32/46 (69%), Positives = 37/46 (80%)
 Frame = -1

Query: 254 DKQSSKTPALLDQAWKDDLDSGRLLVKLFELFGESIFPFIPTPEMA 117
           D Q+ KT A+L Q WKDDL+SG LLV LFELFGESI  FIP+PEM+
Sbjct: 484 DSQAIKTSAILSQVWKDDLNSGHLLVSLFELFGESILSFIPSPEMS 529


>ref|XP_002264290.1| PREDICTED: transcription initiation factor TFIID subunit 6 [Vitis
           vinifera] gi|297739126|emb|CBI28777.3| unnamed protein
           product [Vitis vinifera]
          Length = 543

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 30/46 (65%), Positives = 35/46 (76%)
 Frame = -1

Query: 254 DKQSSKTPALLDQAWKDDLDSGRLLVKLFELFGESIFPFIPTPEMA 117
           D ++ K  A+L Q W+DDL SG LLV LFELFGESI PFIP PEM+
Sbjct: 495 DSRALKMSAVLTQTWRDDLKSGHLLVSLFELFGESILPFIPAPEMS 540


>ref|NP_171987.1| transcription initiation factor TFIID subunit D5 [Arabidopsis
           thaliana] gi|30679057|ref|NP_849592.1| transcription
           initiation factor TFIID subunit D5 [Arabidopsis
           thaliana] gi|79316742|ref|NP_001030969.1| transcription
           initiation factor TFIID subunit D5 [Arabidopsis
           thaliana] gi|7211972|gb|AAF40443.1|AC004809_1 Strong
           similarity to the TATA binding protein-associated factor
           from A. thaliana gb|Y13673. ESTs gb|N38153 and gb|W43450
           come from this gene [Arabidopsis thaliana]
           gi|15293057|gb|AAK93639.1| putative TATA binding
           protein-associated factor [Arabidopsis thaliana]
           gi|20259031|gb|AAM14231.1| putative TATA binding
           protein-associated factor [Arabidopsis thaliana]
           gi|39545920|gb|AAR28023.1| TAF6 [Arabidopsis thaliana]
           gi|332189645|gb|AEE27766.1| transcription initiation
           factor TFIID subunit D5 [Arabidopsis thaliana]
           gi|332189646|gb|AEE27767.1| transcription initiation
           factor TFIID subunit D5 [Arabidopsis thaliana]
           gi|332189647|gb|AEE27768.1| transcription initiation
           factor TFIID subunit D5 [Arabidopsis thaliana]
          Length = 549

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 33/67 (49%), Positives = 44/67 (65%), Gaps = 3/67 (4%)
 Frame = -1

Query: 308 AEEVQDAASKRRRRIQMLDKQSSKT---PALLDQAWKDDLDSGRLLVKLFELFGESIFPF 138
           +E+  DA     R  ++ +   S+     A+LDQ WKDDLDSGRLLVKL EL+G+ I PF
Sbjct: 480 SEQASDANESESRNGKVKESGRSRAITMKAILDQIWKDDLDSGRLLVKLHELYGDRILPF 539

Query: 137 IPTPEMA 117
           IP+ EM+
Sbjct: 540 IPSTEMS 546


>dbj|BAH20105.1| AT1G04950 [Arabidopsis thaliana]
          Length = 549

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 33/67 (49%), Positives = 44/67 (65%), Gaps = 3/67 (4%)
 Frame = -1

Query: 308 AEEVQDAASKRRRRIQMLDKQSSKT---PALLDQAWKDDLDSGRLLVKLFELFGESIFPF 138
           +E+  DA     R  ++ +   S+     A+LDQ WKDDLDSGRLLVKL EL+G+ I PF
Sbjct: 480 SEQASDANESESRNGKVKESGRSRAITMKAILDQIWKDDLDSGRLLVKLHELYGDRILPF 539

Query: 137 IPTPEMA 117
           IP+ EM+
Sbjct: 540 IPSTEMS 546


>dbj|BAH19928.1| AT1G04950 [Arabidopsis thaliana]
          Length = 549

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 33/67 (49%), Positives = 44/67 (65%), Gaps = 3/67 (4%)
 Frame = -1

Query: 308 AEEVQDAASKRRRRIQMLDKQSSKT---PALLDQAWKDDLDSGRLLVKLFELFGESIFPF 138
           +E+  DA     R  ++ +   S+     A+LDQ WKDDLDSGRLLVKL EL+G+ I PF
Sbjct: 480 SEQASDANESESRNGKVKESGRSRAITMKAILDQIWKDDLDSGRLLVKLHELYGDRILPF 539

Query: 137 IPTPEMA 117
           IP+ EM+
Sbjct: 540 IPSTEMS 546


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