BLASTX nr result

ID: Cephaelis21_contig00032121 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00032121
         (422 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308940.1| predicted protein [Populus trichocarpa] gi|2...    94   3e-22
ref|XP_002278438.2| PREDICTED: RRP12-like protein-like [Vitis vi...   100   1e-19
emb|CBI29830.3| unnamed protein product [Vitis vinifera]              100   1e-19
ref|XP_002529505.1| conserved hypothetical protein [Ricinus comm...    84   9e-19
ref|NP_194085.4| NUC173 domain-containing protein [Arabidopsis t...    72   4e-15

>ref|XP_002308940.1| predicted protein [Populus trichocarpa] gi|222854916|gb|EEE92463.1|
            predicted protein [Populus trichocarpa]
          Length = 1177

 Score = 94.0 bits (232), Expect(2) = 3e-22
 Identities = 47/98 (47%), Positives = 65/98 (66%)
 Frame = -1

Query: 296  FVGVMELLLKLKSPSDITLLKSHFYCLRNLLIHILKENLDSGNTKAFLILNEIILALNDS 117
            FV +++LLL LKSP D+  LK+ F C   L++H L+   +  NTKAFL+LNEIIL L D+
Sbjct: 792  FVELIDLLLGLKSPDDVATLKNRFACFHILIVHALEMTSEEKNTKAFLMLNEIILILKDA 851

Query: 116  KEEGRKAAYNIFTETTLRLRNISCSTFEGPY*KLVSMV 3
            +EE RK AY+     +  LRN SC+T    Y +L+SM+
Sbjct: 852  REEARKVAYDTLLFISSSLRNSSCATSREAYQRLISMI 889



 Score = 36.2 bits (82), Expect(2) = 3e-22
 Identities = 16/43 (37%), Positives = 25/43 (58%)
 Frame = -2

Query: 418 VNLLFKFTCHALEVTEKMGLPEAYQTL*SILEKHTSFCSSHLL 290
           ++L++ F     + T+  G  EAY TL  IL++H  FCSS  +
Sbjct: 751 IDLIYNFVVFIFQATDVTGHCEAYHTLSRILQEHAWFCSSRFV 793


>ref|XP_002278438.2| PREDICTED: RRP12-like protein-like [Vitis vinifera]
          Length = 1128

 Score =  100 bits (250), Expect = 1e-19
 Identities = 55/98 (56%), Positives = 68/98 (69%)
 Frame = -1

Query: 296  FVGVMELLLKLKSPSDITLLKSHFYCLRNLLIHILKENLDSGNTKAFLILNEIILALNDS 117
            F+ ++ELLL LKS  DITLLKS F C   LL+H LK +L+  NTKAFLILNEIIL L +S
Sbjct: 778  FIELVELLLGLKSTDDITLLKSRFACFHILLVHALKMSLEEENTKAFLILNEIILTLKNS 837

Query: 116  KEEGRKAAYNIFTETTLRLRNISCSTFEGPY*KLVSMV 3
            KEE RK AY+I    +  L N S  + EG + KL+SM+
Sbjct: 838  KEEVRKVAYDILLVISSSLENSSSLSSEGSHQKLISMI 875


>emb|CBI29830.3| unnamed protein product [Vitis vinifera]
          Length = 1112

 Score =  100 bits (250), Expect = 1e-19
 Identities = 55/98 (56%), Positives = 68/98 (69%)
 Frame = -1

Query: 296  FVGVMELLLKLKSPSDITLLKSHFYCLRNLLIHILKENLDSGNTKAFLILNEIILALNDS 117
            F+ ++ELLL LKS  DITLLKS F C   LL+H LK +L+  NTKAFLILNEIIL L +S
Sbjct: 762  FIELVELLLGLKSTDDITLLKSRFACFHILLVHALKMSLEEENTKAFLILNEIILTLKNS 821

Query: 116  KEEGRKAAYNIFTETTLRLRNISCSTFEGPY*KLVSMV 3
            KEE RK AY+I    +  L N S  + EG + KL+SM+
Sbjct: 822  KEEVRKVAYDILLVISSSLENSSSLSSEGSHQKLISMI 859


>ref|XP_002529505.1| conserved hypothetical protein [Ricinus communis]
            gi|223531021|gb|EEF32874.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1167

 Score = 84.0 bits (206), Expect(2) = 9e-19
 Identities = 43/98 (43%), Positives = 64/98 (65%)
 Frame = -1

Query: 296  FVGVMELLLKLKSPSDITLLKSHFYCLRNLLIHILKENLDSGNTKAFLILNEIILALNDS 117
            F  ++ELL+ LK P+D+  LK+ F C + L+IHIL+  L+  +TKAFL+LNEIIL L  +
Sbjct: 794  FAELIELLIGLKPPTDVASLKNRFACFQILMIHILEACLEEEDTKAFLMLNEIILTLKGA 853

Query: 116  KEEGRKAAYNIFTETTLRLRNISCSTFEGPY*KLVSMV 3
             +E RK AY+     +   RN+S ++    Y KL+SM+
Sbjct: 854  DDEARKVAYDTLLMISSSFRNLSSASSGETYHKLISMI 891



 Score = 34.3 bits (77), Expect(2) = 9e-19
 Identities = 16/41 (39%), Positives = 23/41 (56%)
 Frame = -2

Query: 421 LVNLLFKFTCHALEVTEKMGLPEAYQTL*SILEKHTSFCSS 299
           L+NL++ F     + T      EAY TL  +LE+H  FCS+
Sbjct: 752 LINLIYNFVISVFKNTAVTSHCEAYHTLSRVLEEHAWFCSA 792


>ref|NP_194085.4| NUC173 domain-containing protein [Arabidopsis thaliana]
            gi|332659373|gb|AEE84773.1| NUC173 domain-containing
            protein [Arabidopsis thaliana]
          Length = 1131

 Score = 71.6 bits (174), Expect(2) = 4e-15
 Identities = 40/98 (40%), Positives = 57/98 (58%)
 Frame = -1

Query: 296  FVGVMELLLKLKSPSDITLLKSHFYCLRNLLIHILKENLDSGNTKAFLILNEIILALNDS 117
            F  V+E+LL  K+P D    +S F CL  L+ H ++ + +  N KAFLILNE+IL L + 
Sbjct: 797  FAEVIEMLLSHKTPEDAASSRSRFACLHVLMAHGIQSSTEEENEKAFLILNEMILTLKEG 856

Query: 116  KEEGRKAAYNIFTETTLRLRNISCSTFEGPY*KLVSMV 3
            KEE RKAA +        L+N S  T +    KL++M+
Sbjct: 857  KEEHRKAACDTLVMVYTTLKNSSSITSDELCPKLINMI 894



 Score = 34.3 bits (77), Expect(2) = 4e-15
 Identities = 14/42 (33%), Positives = 25/42 (59%)
 Frame = -2

Query: 421 LVNLLFKFTCHALEVTEKMGLPEAYQTL*SILEKHTSFCSSH 296
           L+ L++     + + T++  L  AY TL  +L++H  FC+SH
Sbjct: 755 LIELIYNLVRQSFQATDEADLYGAYDTLSRVLQEHGWFCASH 796


Top