BLASTX nr result

ID: Cephaelis21_contig00032117 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00032117
         (220 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_182045.1| Golgi SNARE 12 protein [Arabidopsis thaliana] g...   110   9e-23
ref|NP_001189748.1| Golgi SNARE 12 protein [Arabidopsis thaliana...   110   9e-23
ref|XP_002882001.1| hypothetical protein ARALYDRAFT_903960 [Arab...   110   9e-23
ref|NP_001045755.1| Os02g0126800 [Oryza sativa Japonica Group] g...   110   2e-22
ref|XP_002451456.1| hypothetical protein SORBIDRAFT_04g002250 [S...   110   2e-22

>ref|NP_182045.1| Golgi SNARE 12 protein [Arabidopsis thaliana]
           gi|13898895|gb|AAK48905.1|AF357529_1 Golgi SNARE 12
           protein [Arabidopsis thaliana] gi|2583133|gb|AAB82642.1|
           putative cis-Golgi SNARE protein [Arabidopsis thaliana]
           gi|88196757|gb|ABD43021.1| At2g45200 [Arabidopsis
           thaliana] gi|330255430|gb|AEC10524.1| Golgi SNARE 12
           protein [Arabidopsis thaliana]
          Length = 239

 Score =  110 bits (276), Expect = 9e-23
 Identities = 54/61 (88%), Positives = 58/61 (95%)
 Frame = +2

Query: 2   LSSQRSLFGDVQGKVKQLGDKFPIIRGLIGSIKRKKSRDTLILAAVIAACTLFLIIYWLS 181
           L SQRSLF DVQGKVK LGDKFP+IRGL+GSIKRK+SRDTLIL+AVIAACTLFLIIYWLS
Sbjct: 179 LGSQRSLFSDVQGKVKNLGDKFPVIRGLLGSIKRKRSRDTLILSAVIAACTLFLIIYWLS 238

Query: 182 K 184
           K
Sbjct: 239 K 239


>ref|NP_001189748.1| Golgi SNARE 12 protein [Arabidopsis thaliana]
           gi|378405178|sp|O22151.2|GOS12_ARATH RecName: Full=Golgi
           SNAP receptor complex member 1-2; AltName: Full=Golgi
           SNARE 12 protein; Short=AtGOS12
           gi|330255431|gb|AEC10525.1| Golgi SNARE 12 protein
           [Arabidopsis thaliana]
          Length = 257

 Score =  110 bits (276), Expect = 9e-23
 Identities = 54/61 (88%), Positives = 58/61 (95%)
 Frame = +2

Query: 2   LSSQRSLFGDVQGKVKQLGDKFPIIRGLIGSIKRKKSRDTLILAAVIAACTLFLIIYWLS 181
           L SQRSLF DVQGKVK LGDKFP+IRGL+GSIKRK+SRDTLIL+AVIAACTLFLIIYWLS
Sbjct: 197 LGSQRSLFSDVQGKVKNLGDKFPVIRGLLGSIKRKRSRDTLILSAVIAACTLFLIIYWLS 256

Query: 182 K 184
           K
Sbjct: 257 K 257


>ref|XP_002882001.1| hypothetical protein ARALYDRAFT_903960 [Arabidopsis lyrata subsp.
           lyrata] gi|297327840|gb|EFH58260.1| hypothetical protein
           ARALYDRAFT_903960 [Arabidopsis lyrata subsp. lyrata]
          Length = 239

 Score =  110 bits (276), Expect = 9e-23
 Identities = 54/61 (88%), Positives = 58/61 (95%)
 Frame = +2

Query: 2   LSSQRSLFGDVQGKVKQLGDKFPIIRGLIGSIKRKKSRDTLILAAVIAACTLFLIIYWLS 181
           L SQRSLF DVQGKVK LGDKFP+IRGL+GSIKRK+SRDTLIL+AVIAACTLFLIIYWLS
Sbjct: 179 LGSQRSLFSDVQGKVKNLGDKFPVIRGLLGSIKRKRSRDTLILSAVIAACTLFLIIYWLS 238

Query: 182 K 184
           K
Sbjct: 239 K 239


>ref|NP_001045755.1| Os02g0126800 [Oryza sativa Japonica Group]
           gi|41053076|dbj|BAD08020.1| putative 28 kDa Golgi SNARE
           protein [Oryza sativa Japonica Group]
           gi|113535286|dbj|BAF07669.1| Os02g0126800 [Oryza sativa
           Japonica Group] gi|215701289|dbj|BAG92713.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 247

 Score =  110 bits (274), Expect = 2e-22
 Identities = 51/61 (83%), Positives = 61/61 (100%)
 Frame = +2

Query: 2   LSSQRSLFGDVQGKVKQLGDKFPIIRGLIGSIKRKKSRDTLILAAVIAACTLFLIIYWLS 181
           LS+QR+LFGDVQGKVKQLG+KFP+IRGL+G+IKRKKS+DT+IL+AVIAACT+FLIIYWLS
Sbjct: 187 LSNQRALFGDVQGKVKQLGEKFPVIRGLLGAIKRKKSKDTIILSAVIAACTIFLIIYWLS 246

Query: 182 K 184
           K
Sbjct: 247 K 247


>ref|XP_002451456.1| hypothetical protein SORBIDRAFT_04g002250 [Sorghum bicolor]
           gi|241931287|gb|EES04432.1| hypothetical protein
           SORBIDRAFT_04g002250 [Sorghum bicolor]
          Length = 248

 Score =  110 bits (274), Expect = 2e-22
 Identities = 51/61 (83%), Positives = 61/61 (100%)
 Frame = +2

Query: 2   LSSQRSLFGDVQGKVKQLGDKFPIIRGLIGSIKRKKSRDTLILAAVIAACTLFLIIYWLS 181
           LS+QR+LFGD+QGKVKQLG+KFPIIRGL+G+IKRKKS+DT+IL+AVIAACT+FLIIYWLS
Sbjct: 188 LSNQRALFGDIQGKVKQLGEKFPIIRGLLGAIKRKKSKDTIILSAVIAACTIFLIIYWLS 247

Query: 182 K 184
           K
Sbjct: 248 K 248


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