BLASTX nr result

ID: Cephaelis21_contig00032054 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00032054
         (615 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234185.1| uncharacterized protein LOC606305 [Solanum l...    60   4e-15
emb|CAC36403.1| hypothetical protein [Solanum lycopersicum]            60   4e-15
emb|CAC36391.1| hypothetical protein [Capsella rubella]                44   2e-07

>ref|NP_001234185.1| uncharacterized protein LOC606305 [Solanum lycopersicum]
           gi|13620222|emb|CAC36398.1| hypothetical protein
           [Solanum lycopersicum]
          Length = 750

 Score = 59.7 bits (143), Expect(2) = 4e-15
 Identities = 29/50 (58%), Positives = 39/50 (78%), Gaps = 1/50 (2%)
 Frame = -2

Query: 452 MEGGEFGDHNVLLRSNSSASEDDLEAQPT-SSSGRKGIRDLLQRLDRRFN 306
           M GGE+GDHN+LLRS SSASE D+E+Q +   +  + I+DLL+RLDR F+
Sbjct: 1   MSGGEYGDHNILLRSTSSASEGDVESQSSPRRTNTRSIKDLLKRLDRGFS 50



 Score = 47.0 bits (110), Expect(2) = 4e-15
 Identities = 28/65 (43%), Positives = 34/65 (52%)
 Frame = -3

Query: 196 RSLDGADHHNSVPSPSYSDHGVNYGYSNSTTNVNGNASAHAHVGEDDMLGDFAPPEWALL 17
           RS D   HH+S PSPS               N  G +S       D++LGD APPEWA+L
Sbjct: 53  RSSDRDHHHSSSPSPS---------------NRRGVSST-----ADEILGDSAPPEWAML 92

Query: 16  LIGCL 2
           L+GCL
Sbjct: 93  LVGCL 97


>emb|CAC36403.1| hypothetical protein [Solanum lycopersicum]
          Length = 750

 Score = 59.7 bits (143), Expect(2) = 4e-15
 Identities = 29/50 (58%), Positives = 39/50 (78%), Gaps = 1/50 (2%)
 Frame = -2

Query: 452 MEGGEFGDHNVLLRSNSSASEDDLEAQPT-SSSGRKGIRDLLQRLDRRFN 306
           M GGE+GDHN+LLRS SSASE D+E+Q +   +  + I+DLL+RLDR F+
Sbjct: 1   MSGGEYGDHNILLRSTSSASEGDVESQSSPRRTNTRSIKDLLKRLDRGFS 50



 Score = 47.0 bits (110), Expect(2) = 4e-15
 Identities = 28/65 (43%), Positives = 34/65 (52%)
 Frame = -3

Query: 196 RSLDGADHHNSVPSPSYSDHGVNYGYSNSTTNVNGNASAHAHVGEDDMLGDFAPPEWALL 17
           RS D   HH+S PSPS               N  G +S       D++LGD APPEWA+L
Sbjct: 53  RSSDRDHHHSSSPSPS---------------NRRGVSST-----ADEILGDSAPPEWAML 92

Query: 16  LIGCL 2
           L+GCL
Sbjct: 93  LVGCL 97


>emb|CAC36391.1| hypothetical protein [Capsella rubella]
          Length = 780

 Score = 44.3 bits (103), Expect(2) = 2e-07
 Identities = 25/71 (35%), Positives = 39/71 (54%)
 Frame = -3

Query: 214 FIAFNSRSLDGADHHNSVPSPSYSDHGVNYGYSNSTTNVNGNASAHAHVGEDDMLGDFAP 35
           F    +  +D   H+ S  S ++S    + G  ++  NV+     +    ++++LGD AP
Sbjct: 68  FKRMENNRVDRERHNPSSSSSAFSAAEEDGGGISNLHNVDDRIDEYGF--DEEVLGDSAP 125

Query: 34  PEWALLLIGCL 2
           PEWALLLIGCL
Sbjct: 126 PEWALLLIGCL 136



 Score = 36.2 bits (82), Expect(2) = 2e-07
 Identities = 24/54 (44%), Positives = 32/54 (59%), Gaps = 8/54 (14%)
 Frame = -2

Query: 443 GEFGDHNVLLRS----NSSASED---DLEAQ-PTSSSGRKGIRDLLQRLDRRFN 306
           GE+ +   LLRS    +S   ED   D+E+Q P   SG  G+RDL + LDRRF+
Sbjct: 7   GEYNEDRHLLRSTGDEDSIGREDGDIDVESQSPAVRSGAGGVRDLFKHLDRRFS 60


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