BLASTX nr result
ID: Cephaelis21_contig00031756
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cephaelis21_contig00031756
(693 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containi... 105 2e-28
ref|XP_002326537.1| predicted protein [Populus trichocarpa] gi|2... 91 3e-24
ref|XP_003542113.1| PREDICTED: pentatricopeptide repeat-containi... 92 1e-23
ref|XP_003597874.1| Pentatricopeptide repeat-containing protein ... 88 4e-23
ref|XP_003546931.1| PREDICTED: pentatricopeptide repeat-containi... 87 3e-22
>ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52620-like
[Vitis vinifera]
Length = 879
Score = 105 bits (261), Expect(2) = 2e-28
Identities = 56/131 (42%), Positives = 79/131 (60%), Gaps = 7/131 (5%)
Frame = -1
Query: 498 ELCEGSLFFDQILTSACCPNYSTFYFLVNGLSKYAPVY*GDKMSSSPGC-------SSY* 340
+L + + FF+++L + C PN TF +LVNG SK G + S G S +
Sbjct: 639 KLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKN-----GTRAISEKGNEFQENKQSMFL 693
Query: 339 IFHQRMILDGWISVTAAFGSILVCLCLHGFLRTGLQL*DKKVNKGCISNSFSFAVLLHGI 160
F RMI DGW +AA+ SIL+CLC +G RT LQL +K +KGCI +S SF LLHG+
Sbjct: 694 NFFGRMISDGWAPRSAAYNSILICLCQYGMFRTALQLSNKMTSKGCIPDSVSFVALLHGV 753
Query: 159 YVEGKSERWRS 127
+EG+S+ W++
Sbjct: 754 CLEGRSKEWKN 764
Score = 46.6 bits (109), Expect(2) = 2e-28
Identities = 25/53 (47%), Positives = 33/53 (62%)
Frame = -3
Query: 649 VVAYTTPFKWIFCCNRDVSVAGKIFKEMQLKGLLPNVVTNTTIVGGFCKVGTL 491
VV YT+ FC D+ + KIF+EMQ GL+PNVVT + ++G FCK L
Sbjct: 589 VVTYTSLING-FCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKL 640
>ref|XP_002326537.1| predicted protein [Populus trichocarpa] gi|222833859|gb|EEE72336.1|
predicted protein [Populus trichocarpa]
Length = 826
Score = 90.5 bits (223), Expect(2) = 3e-24
Identities = 50/144 (34%), Positives = 79/144 (54%), Gaps = 2/144 (1%)
Frame = -1
Query: 477 FFDQILTSACCPNYSTFYFLVNGLSKYAPVY*GDKMSSSPGCSSY*I--FHQRMILDGWI 304
FF+ +L + C PN TF +L+NGL+ +K + S + + F + MI DGW
Sbjct: 647 FFELMLLNRCIPNDVTFNYLINGLTNNLATAVSNKANESLEIKASLMMDFFRTMISDGWE 706
Query: 303 SVTAAFGSILVCLCLHGFLRTGLQL*DKKVNKGCISNSFSFAVLLHGIYVEGKSERWRSN 124
AA+ S+L+CLC H + LQL DK KG + SFA L++G+ +EG+S+ W++
Sbjct: 707 QRVAAYNSVLICLCHHKMVNAALQLRDKMTGKGIFPDPVSFAALVYGLCLEGRSKEWKNT 766
Query: 123 MKLKIYNCGYIIAEEFRCKMKKPF 52
+ K+ IA ++ K+ PF
Sbjct: 767 ISCKLNEWELQIAVKYSQKL-NPF 789
Score = 47.4 bits (111), Expect(2) = 3e-24
Identities = 26/55 (47%), Positives = 33/55 (60%)
Frame = -3
Query: 649 VVAYTTPFKWIFCCNRDVSVAGKIFKEMQLKGLLPNVVTNTTIVGGFCKVGTLRR 485
VV YT+ FC D S A K F+EM+ GL PNVVT T ++G FCK G + +
Sbjct: 590 VVTYTSLING-FCRTGDSSRAEKTFEEMRSSGLKPNVVTYTILIGCFCKEGKISK 643
>ref|XP_003542113.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52620-like
[Glycine max]
Length = 825
Score = 91.7 bits (226), Expect(2) = 1e-23
Identities = 49/118 (41%), Positives = 70/118 (59%), Gaps = 2/118 (1%)
Frame = -1
Query: 474 FDQILTSACCPNYSTFYFLVNGLSKYA--PVY*GDKMSSSPGCSSY*IFHQRMILDGWIS 301
F+ +L + C PN +TF++L+NGL+ A PV +K S S F M+LDGW
Sbjct: 648 FELMLMNGCLPNDATFHYLINGLTNTATSPVLIEEKDSKENERSLILDFFTMMLLDGWDQ 707
Query: 300 VTAAFGSILVCLCLHGFLRTGLQL*DKKVNKGCISNSFSFAVLLHGIYVEGKSERWRS 127
V AA+ S++VCLC HG + T L K + KG + +S F LLHG+ +GKS+ WR+
Sbjct: 708 VIAAYNSVIVCLCKHGTVDTAQLLLTKMLTKGFLIDSVCFTALLHGLCHKGKSKEWRN 765
Score = 44.3 bits (103), Expect(2) = 1e-23
Identities = 25/55 (45%), Positives = 32/55 (58%)
Frame = -3
Query: 649 VVAYTTPFKWIFCCNRDVSVAGKIFKEMQLKGLLPNVVTNTTIVGGFCKVGTLRR 485
V+ YT+ FC D+ A K+F M+ L+PNVVT TT+VGGF K G R
Sbjct: 590 VITYTSLING-FCKKADMIRAEKVFSGMKSFDLVPNVVTYTTLVGGFFKAGKPER 643
>ref|XP_003597874.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359582|gb|ABD28711.2| Tetratricopeptide-like
helical [Medicago truncatula] gi|355486922|gb|AES68125.1|
Pentatricopeptide repeat-containing protein [Medicago
truncatula]
Length = 822
Score = 87.8 bits (216), Expect(2) = 4e-23
Identities = 48/140 (34%), Positives = 74/140 (52%)
Frame = -1
Query: 477 FFDQILTSACCPNYSTFYFLVNGLSKYAPVY*GDKMSSSPGCSSY*IFHQRMILDGWISV 298
FF+ +L + C PN +TF++L+NGL+ + + S F MI +GW V
Sbjct: 647 FFELMLMNNCLPNDTTFHYLINGLTNITNTTLLIEKNEENDRSLILDFFATMISEGWSQV 706
Query: 297 TAAFGSILVCLCLHGFLRTGLQL*DKKVNKGCISNSFSFAVLLHGIYVEGKSERWRSNMK 118
A + SI+VCLC HG + T L K + KG + +S F+ LLHG+ GKS+ WR+ +
Sbjct: 707 IATYNSIIVCLCKHGMVDTAQLLQTKMLRKGFLMDSVCFSALLHGLCQTGKSKEWRNIIS 766
Query: 117 LKIYNCGYIIAEEFRCKMKK 58
+ + A E+ K+ K
Sbjct: 767 GDLTKIDFQTAFEYSLKLDK 786
Score = 46.2 bits (108), Expect(2) = 4e-23
Identities = 26/51 (50%), Positives = 32/51 (62%)
Frame = -3
Query: 649 VVAYTTPFKWIFCCNRDVSVAGKIFKEMQLKGLLPNVVTNTTIVGGFCKVG 497
VVAYT+ FC D+S A K+F+ MQ L PNVVT T ++GGF K G
Sbjct: 590 VVAYTSLING-FCKIADMSRAEKVFRAMQSFNLEPNVVTYTILIGGFSKTG 639
>ref|XP_003546931.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Glycine max]
Length = 808
Score = 86.7 bits (213), Expect(2) = 3e-22
Identities = 46/118 (38%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
Frame = -1
Query: 474 FDQILTSACCPNYSTFYFLVNGLSKYA--PVY*GDKMSSSPGCSSY*IFHQRMILDGWIS 301
F+ +L + C PN +TF++L+NGL+ A PV +K S S F M+ +GW
Sbjct: 644 FELMLMNGCPPNDATFHYLINGLTNTATSPVLIEEKDSMENERSLILDFFTMMLSEGWDQ 703
Query: 300 VTAAFGSILVCLCLHGFLRTGLQL*DKKVNKGCISNSFSFAVLLHGIYVEGKSERWRS 127
V AA+ S++VCLC HG + T L K + KG + +S F +LHG+ +GKS+ WR+
Sbjct: 704 VIAAYNSVIVCLCKHGMVDTAQLLLTKMLTKGFLIDSVCFTAMLHGLCHKGKSKEWRN 761
Score = 44.7 bits (104), Expect(2) = 3e-22
Identities = 24/51 (47%), Positives = 32/51 (62%)
Frame = -3
Query: 649 VVAYTTPFKWIFCCNRDVSVAGKIFKEMQLKGLLPNVVTNTTIVGGFCKVG 497
V+ YT+ FC D+ A K+F+ M+ L+PNVVT TT+VGGF K G
Sbjct: 586 VITYTSLING-FCKKADMIRAEKVFRGMKSFDLVPNVVTYTTLVGGFFKAG 635