BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00031650
         (505 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptas...   112   2e-23
gb|AAD22368.1| putative non-LTR retroelement reverse transcripta...    98   6e-19
dbj|BAB09815.1| non-LTR retroelement reverse transcriptase-like ...    95   7e-18
gb|AAF23831.1|AC007234_3 F1E22.12 [Arabidopsis thaliana]               92   3e-17
sp|P0C2F6.1|RNHX1_ARATH RecName: Full=Putative ribonuclease H pr...    92   3e-17

>gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptase);
           Polynucleotidyl transferase, Ribonuclease H fold
           [Medicago truncatula]
          Length = 729

 Score =  112 bits (281), Expect = 2e-23
 Identities = 60/168 (35%), Positives = 83/168 (49%)
 Frame = -2

Query: 504 CPQCGHPLETVLHVLRDCPYTREVWDKFVPQNDSQNFNNLQ*EDWFKLXXXXXXXXXXXX 325
           CP C    ETV+HVLRDC ++ +VW + +P N   NF +    +W               
Sbjct: 505 CPCCAREDETVIHVLRDCVHSTQVWLRLIPHNYITNFFSFDCREWV-FNNLNKKGIGDNP 563

Query: 324 XQWNAMFATTCWYLWKRRNEVVFGGEFFSPNEVILQAWSSAKHTQEGISQQQLLPGRENQ 145
             W   F TTCWYLW  RN+ +F   F  P+   L      K T+E     +L+    +Q
Sbjct: 564 ATWQTTFMTTCWYLWNWRNKSIFEIGFQRPSNPTLVI---QKFTREIEDNTKLVHKSSHQ 620

Query: 144 TRQLQSCWISPPQGWVKVNSDGARESTTGWATAGGVIRDHIGQWICGY 1
              +   W+ PP GWVK+N DGA + +   A  GG++RD  G+WI GY
Sbjct: 621 KETIYIGWMRPPFGWVKLNCDGAWKGSGTLAGCGGLLRDSDGRWIKGY 668


>gb|AAD22368.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 321

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 56/171 (32%), Positives = 80/171 (46%), Gaps = 3/171 (1%)
 Frame = -2

Query: 504 CPQCGHPLETVLHVLRDCPYTREVWDKFVPQNDSQNFNNLQ*EDWFKLXXXXXXXXXXXX 325
           C  C    ET+LHVLRDCP    +W + VP++  + F      +W               
Sbjct: 35  CQICQGGEETILHVLRDCPAMAGIWSRLVPRDQIRQFFTASLLEWI-------YKNLRER 87

Query: 324 XQWNAMFATTCWYLWKRRNEVVFGGEFFSPNEVILQAWSSAKHTQEGIS-QQQLLPGREN 148
             W  +F    W+ WK R   +FGG     + V        K   E ++     + G E 
Sbjct: 88  GSWPTVFVMAVWWGWKWRCGNIFGGNGKCRDRV-----KFIKDLAEEVAIANAFVKGNEV 142

Query: 147 QTRQLQSC--WISPPQGWVKVNSDGARESTTGWATAGGVIRDHIGQWICGY 1
           +  +++    W+SP  GWVK+N+DGA     G+ATAGGV+RDH G WI G+
Sbjct: 143 RVSRVERLVSWVSPEDGWVKLNTDGASRGNPGFATAGGVLRDHNGAWIGGF 193


>dbj|BAB09815.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
           thaliana]
          Length = 676

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 55/168 (32%), Positives = 76/168 (45%)
 Frame = -2

Query: 504 CPQCGHPLETVLHVLRDCPYTREVWDKFVPQNDSQNFNNLQ*EDWFKLXXXXXXXXXXXX 325
           CP C    E+++HVLRDCP    +W + VP  + + F      +W  +            
Sbjct: 385 CPLCKGASESLIHVLRDCPAMMGIWMRVVPVMEQRRFFETSLLEW--MYGNLKERSDSER 442

Query: 324 XQWNAMFATTCWYLWKRRNEVVFGGEFFSPNEVILQAWSSAKHTQEGISQQQLLPGRENQ 145
             W  +FA T W+ WK R   VFG +    + V  +   SA    E          RE+ 
Sbjct: 443 RSWPTLFALTVWWGWKWRCGYVFGEDSRCRDRV--KFLKSAVAEVEAAHLAANGDAREDV 500

Query: 144 TRQLQSCWISPPQGWVKVNSDGARESTTGWATAGGVIRDHIGQWICGY 1
             +    W  P +GWV +N+DGA     G ATAGGVIRD  G W+ G+
Sbjct: 501 LVERMIAWRKPAEGWVTMNTDGASHGNPGQATAGGVIRDEHGSWLVGF 548


>gb|AAF23831.1|AC007234_3 F1E22.12 [Arabidopsis thaliana]
          Length = 1055

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 55/169 (32%), Positives = 78/169 (46%), Gaps = 1/169 (0%)
 Frame = -2

Query: 504 CPQCGHPLETVLHVLRDCPYTREVWDKFVPQNDSQNFNNLQ*EDWFKLXXXXXXXXXXXX 325
           C  C   +E++LHVLRDCP    +W + VPQ   Q F +    +W  L            
Sbjct: 438 CQVCKGGVESMLHVLRDCPAQLGIWVRVVPQRRQQGFFSKSLFEW--LYDNLGDRSGCED 495

Query: 324 XQWNAMFATTCWYLWKRRNEVVFGGEFFSPNEV-ILQAWSSAKHTQEGISQQQLLPGREN 148
             W+ +FA   W+ WK R   +FG      + V  ++ W+   +         +L G   
Sbjct: 496 IPWSTIFAVIIWWGWKWRCGNIFGENTKCRDRVKFVKEWAVEVYRAHS---GNVLVGITQ 552

Query: 147 QTRQLQSCWISPPQGWVKVNSDGARESTTGWATAGGVIRDHIGQWICGY 1
              +    W+SP  GWVKVN+DGA     G A+AGGV+RD  G W  G+
Sbjct: 553 PRVERMIGWVSPCVGWVKVNTDGASRGNPGLASAGGVLRDCTGAWCGGF 601


>sp|P0C2F6.1|RNHX1_ARATH RecName: Full=Putative ribonuclease H protein At1g65750
          Length = 620

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 55/169 (32%), Positives = 78/169 (46%), Gaps = 1/169 (0%)
 Frame = -2

Query: 504 CPQCGHPLETVLHVLRDCPYTREVWDKFVPQNDSQNFNNLQ*EDWFKLXXXXXXXXXXXX 325
           C  C   +E++LHVLRDCP    +W + VPQ   Q F +    +W  L            
Sbjct: 329 CQVCKGGVESMLHVLRDCPAQLGIWVRVVPQRRQQGFFSKSLFEW--LYDNLGDRSGCED 386

Query: 324 XQWNAMFATTCWYLWKRRNEVVFGGEFFSPNEV-ILQAWSSAKHTQEGISQQQLLPGREN 148
             W+ +FA   W+ WK R   +FG      + V  ++ W+   +         +L G   
Sbjct: 387 IPWSTIFAVIIWWGWKWRCGNIFGENTKCRDRVKFVKEWAVEVYRAHS---GNVLVGITQ 443

Query: 147 QTRQLQSCWISPPQGWVKVNSDGARESTTGWATAGGVIRDHIGQWICGY 1
              +    W+SP  GWVKVN+DGA     G A+AGGV+RD  G W  G+
Sbjct: 444 PRVERMIGWVSPCVGWVKVNTDGASRGNPGLASAGGVLRDCTGAWCGGF 492