BLASTX nr result

ID: Cephaelis21_contig00031612 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00031612
         (341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316987.1| predicted protein [Populus trichocarpa] gi|2...    68   9e-10
ref|XP_002319292.1| predicted protein [Populus trichocarpa] gi|2...    65   6e-09
ref|XP_002281469.2| PREDICTED: F-box protein At3g62230-like [Vit...    61   1e-07
ref|XP_002523002.1| conserved hypothetical protein [Ricinus comm...    60   2e-07

>ref|XP_002316987.1| predicted protein [Populus trichocarpa] gi|222860052|gb|EEE97599.1|
           predicted protein [Populus trichocarpa]
          Length = 463

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 44/112 (39%), Positives = 63/112 (56%), Gaps = 4/112 (3%)
 Frame = -2

Query: 340 WNEDDIENHPPQQTLFQLPLI--NNGELIKTVQSLRLFSCNIFPANSPTSHKLFALRCLS 167
           W E  +ENH   Q  F+LPL+   +G+ +K   S++LFSC+   +N        AL+ LS
Sbjct: 129 WREHALENH---QAAFELPLLVYEHGQALK---SMKLFSCSFDVSNFSN---FCALKTLS 179

Query: 166 LGWITLNDSCMKDLLNKCPFLESLSLRRCRYRDYIEI--VSKSLKRLIMEKC 17
           LGWI +N   +  +L  CP LESLSL++C      EI      LK L++E+C
Sbjct: 180 LGWIKINMGSILAILESCPLLESLSLKKCWDIVSFEISKPGSRLKSLVIEEC 231


>ref|XP_002319292.1| predicted protein [Populus trichocarpa] gi|222857668|gb|EEE95215.1|
           predicted protein [Populus trichocarpa]
          Length = 463

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 40/112 (35%), Positives = 65/112 (58%), Gaps = 4/112 (3%)
 Frame = -2

Query: 340 WNEDDIENHPPQQTLFQLP--LINNGELIKTVQSLRLFSCNIFPANSPTSHKLFALRCLS 167
           W ED I NH   + + +LP  +  +G+ +   +SL+LFSC  F A+  T+    A++ LS
Sbjct: 129 WREDAIMNH---EAVSELPSHVYEHGQAL---ESLKLFSCR-FDASKFTNFS--AIKSLS 179

Query: 166 LGWITLNDSCMKDLLNKCPFLESLSLRRCRYRDYIEIVSKSLK--RLIMEKC 17
           LGWI +N   +  +L  CP LE+L L++C   +Y E+    L+   L+++KC
Sbjct: 180 LGWININIGSILVILESCPLLETLHLKKCWNLEYFEVSKPGLRLQNLVLDKC 231


>ref|XP_002281469.2| PREDICTED: F-box protein At3g62230-like [Vitis vinifera]
          Length = 730

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 41/110 (37%), Positives = 60/110 (54%), Gaps = 2/110 (1%)
 Frame = -2

Query: 340 WNEDDIENHPPQQTLFQLPLINNGELIKTVQSLRLFSCNIFPANSPTSHKLFALRCLSLG 161
           W ED+ +   P   LFQLP        K ++SL+LFSC  F  +  ++  +  L+ LSLG
Sbjct: 134 WGEDEFD---PHLRLFQLPTFVYKH--KVLESLKLFSCR-FDVSEFSAFSV--LKDLSLG 185

Query: 160 WITLNDSCMKDLLNKCPFLESLSLRRCRYRDYIEIVSKS--LKRLIMEKC 17
           W+ +  S +K LL  CP LE L L+ C      +I   +  L+RLI++KC
Sbjct: 186 WVEVRSSSLKALLMNCPLLEGLCLKNCWNLGDPDISGPNLRLRRLIIDKC 235


>ref|XP_002523002.1| conserved hypothetical protein [Ricinus communis]
           gi|223537814|gb|EEF39432.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 414

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 40/110 (36%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
 Frame = -2

Query: 340 WNEDDIENHPPQQTLFQLPLINNGELIKTVQSLRLFSCNIFPANSPTSHKLFALRCLSLG 161
           W ED +++H P    F+LPL       K +  L+LFSC  F A+  T+     L+ +SLG
Sbjct: 138 WREDSLDSHQPA---FELPLQIYQH--KRLVLLKLFSCR-FDASRFTNFS--TLKSVSLG 189

Query: 160 WITLNDSCMKDLLNKCPFLESLSLRRCRYRDYIEI--VSKSLKRLIMEKC 17
           W  ++   +K LL  CP +ESLSL++C   ++ EI   +  LK L+++ C
Sbjct: 190 WTGISVVSIKALLVNCPLIESLSLKKCWDLEHFEISLPNLRLKNLVLDNC 239


Top