BLASTX nr result

ID: Cephaelis21_contig00031543 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00031543
         (850 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF97969.1|AC000103_19 F21J9.30 [Arabidopsis thaliana]             226   5e-57
gb|AAG03119.1|AC004133_13 F5A9.24 [Arabidopsis thaliana]              226   5e-57
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...   226   5e-57
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...   225   1e-56
gb|AAB84340.1| putative non-LTR retroelement reverse transcripta...   224   2e-56

>gb|AAF97969.1|AC000103_19 F21J9.30 [Arabidopsis thaliana]
          Length = 1270

 Score =  226 bits (576), Expect = 5e-57
 Identities = 115/266 (43%), Positives = 164/266 (61%)
 Frame = +2

Query: 50   LKVHLDEVYKEEEEFWSKKSRISWLKERDKNTKFFHAVIAESRKKNQIECLKNEFGTESH 229
            LK  L + Y+EEE +W +KSR  WL+  ++N+K+FHA + ++R++ +IE LK+  G    
Sbjct: 284  LKKDLAKAYREEEAYWKQKSRQKWLRSGNRNSKYFHAAVKQNRQRKRIEKLKDVNGNMQT 343

Query: 230  SNLEIAEEIAKYFDNLFTTIYPKDNAQILDGIPRTMTESMNANLTRAVEDQEIKKTLFSM 409
            S     E  A YF NLF +  P        G+   ++E MN +L   V  QEIK+ +FS+
Sbjct: 344  SEAAKGEVAAAYFGNLFKSSNPSGFTDWFSGLVPRVSEVMNESLVGEVSAQEIKEAVFSI 403

Query: 410  HPHKAPEPDSMPPFFFQKYWNVISNDVCNAVKSFFHSTHMLAAFNHTLISLIPKIKNPSQ 589
             P  AP PD M   FFQ YW+ + N V + VK FF    M A +N+T + LIPK ++P++
Sbjct: 404  KPASAPGPDGMSALFFQHYWSTVGNQVTSEVKKFFADGIMPAEWNYTHLCLIPKTQHPTE 463

Query: 590  VSDFRPVSHCNVVYKIISKILAERLKPLLSNCISENQFAFVPGRQILDNVVVAHKFLHH* 769
            + D RP+S C+V+YKIISKI+A+RL+P L   +S+ Q AFV  R I DN++VAH+ +H  
Sbjct: 464  MVDLRPISLCSVLYKIISKIMAKRLQPWLPEIVSDTQSAFVSERLITDNILVAHELVHSL 523

Query: 770  NTVRSGKESFLALKLDMSKAYDRVVW 847
                     F+A+K DMSKAYDRV W
Sbjct: 524  KVHPRISSEFMAVKSDMSKAYDRVEW 549


>gb|AAG03119.1|AC004133_13 F5A9.24 [Arabidopsis thaliana]
          Length = 1254

 Score =  226 bits (576), Expect = 5e-57
 Identities = 115/266 (43%), Positives = 164/266 (61%)
 Frame = +2

Query: 50   LKVHLDEVYKEEEEFWSKKSRISWLKERDKNTKFFHAVIAESRKKNQIECLKNEFGTESH 229
            LK  L + Y+EEE +W +KSR  WL+  ++N+K+FHA + ++R++ +IE LK+  G    
Sbjct: 287  LKKDLAKAYREEEAYWKQKSRQKWLRSGNRNSKYFHAAVKQNRQRKRIEKLKDVNGNMQT 346

Query: 230  SNLEIAEEIAKYFDNLFTTIYPKDNAQILDGIPRTMTESMNANLTRAVEDQEIKKTLFSM 409
            S     E  A YF NLF +  P        G+   ++E MN +L   V  QEIK+ +FS+
Sbjct: 347  SEAAKGEVAAAYFGNLFKSSNPSGFTDWFSGLVPRVSEVMNESLVGEVSAQEIKEAVFSI 406

Query: 410  HPHKAPEPDSMPPFFFQKYWNVISNDVCNAVKSFFHSTHMLAAFNHTLISLIPKIKNPSQ 589
             P  AP PD M   FFQ YW+ + N V + VK FF    M A +N+T + LIPK ++P++
Sbjct: 407  KPASAPGPDGMSALFFQHYWSTVGNQVTSEVKKFFADGIMPAEWNYTHLCLIPKTQHPTE 466

Query: 590  VSDFRPVSHCNVVYKIISKILAERLKPLLSNCISENQFAFVPGRQILDNVVVAHKFLHH* 769
            + D RP+S C+V+YKIISKI+A+RL+P L   +S+ Q AFV  R I DN++VAH+ +H  
Sbjct: 467  MVDLRPISLCSVLYKIISKIMAKRLQPWLPEIVSDTQSAFVSERLITDNILVAHELVHSL 526

Query: 770  NTVRSGKESFLALKLDMSKAYDRVVW 847
                     F+A+K DMSKAYDRV W
Sbjct: 527  KVHPRISSEFMAVKSDMSKAYDRVEW 552


>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score =  226 bits (576), Expect = 5e-57
 Identities = 118/275 (42%), Positives = 168/275 (61%)
 Frame = +2

Query: 23  NRD*EKWKQLKVHLDEVYKEEEEFWSKKSRISWLKERDKNTKFFHAVIAESRKKNQIECL 202
           +R  E+  +L + L E Y++EE++W +KSR  W+K  D N+KFFHA+  + R +N+I  L
Sbjct: 96  DRSREEITELTLRLKEAYRDEEQYWYQKSRSLWMKLGDNNSKFFHALTKQRRARNRITGL 155

Query: 203 KNEFGTESHSNLEIAEEIAKYFDNLFTTIYPKDNAQILDGIPRTMTESMNANLTRAVEDQ 382
            +E G  S  + +I      YF NLFTT  P+   + L  +   +T+ +N  LT    + 
Sbjct: 156 HDENGIWSIEDDDIQNIAVSYFQNLFTTANPQVFDEALGEVQVLITDRINDLLTADATEC 215

Query: 383 EIKKTLFSMHPHKAPEPDSMPPFFFQKYWNVISNDVCNAVKSFFHSTHMLAAFNHTLISL 562
           E++  LF +HP KAP PD M   FFQK W +I +D+ + V SF          N T I L
Sbjct: 216 EVRAALFMIHPEKAPGPDGMTALFFQKSWAIIKSDLLSLVNSFLQEGVFDKRLNTTNICL 275

Query: 563 IPKIKNPSQVSDFRPVSHCNVVYKIISKILAERLKPLLSNCISENQFAFVPGRQILDNVV 742
           IPK + P+++++ RP+S CNV YK+ISKIL +RLK +L N ISE Q AFV GR I DN++
Sbjct: 276 IPKTERPTRMTELRPISLCNVGYKVISKILCQRLKTVLPNLISETQSAFVDGRLISDNIL 335

Query: 743 VAHKFLHH*NTVRSGKESFLALKLDMSKAYDRVVW 847
           +A +  H   T  S K+ F+A+K DMSKAYD+V W
Sbjct: 336 IAQEMFHGLRTNSSCKDKFMAIKTDMSKAYDQVEW 370


>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1374

 Score =  225 bits (573), Expect = 1e-56
 Identities = 108/267 (40%), Positives = 165/267 (61%)
 Frame = +2

Query: 47   QLKVHLDEVYKEEEEFWSKKSRISWLKERDKNTKFFHAVIAESRKKNQIECLKNEFGTES 226
            +LK  L + Y  EE+FW +KSRI W++  D+NTK+FHA     R +N+I+ L +E G E 
Sbjct: 320  RLKKELSQEYNNEEQFWQEKSRIMWMRNGDRNTKYFHAATKNRRAQNRIQKLIDEEGREW 379

Query: 227  HSNLEIAEEIAKYFDNLFTTIYPKDNAQILDGIPRTMTESMNANLTRAVEDQEIKKTLFS 406
             S+ ++      YF  LF +       + L+ +   +++ MN NL   +  +E+++  FS
Sbjct: 380  TSDEDLGRVAEAYFKKLFASEDVGYTVEELENLTPLVSDQMNNNLLAPITKEEVQRATFS 439

Query: 407  MHPHKAPEPDSMPPFFFQKYWNVISNDVCNAVKSFFHSTHMLAAFNHTLISLIPKIKNPS 586
            ++PHK P PD M  F +Q++W  + + +   V++FF S  +    N T I LIPKI    
Sbjct: 440  INPHKCPGPDGMNGFLYQQFWETMGDQITEMVQAFFRSGSIEEGMNKTNICLIPKILKAE 499

Query: 587  QVSDFRPVSHCNVVYKIISKILAERLKPLLSNCISENQFAFVPGRQILDNVVVAHKFLHH 766
            +++DFRP+S CNV+YK+I K++A RLK +L + ISE Q AFV GR I DN+++AH+ LH 
Sbjct: 500  KMTDFRPISLCNVIYKVIGKLMANRLKKILPSLISETQAAFVKGRLISDNILIAHELLHA 559

Query: 767  *NTVRSGKESFLALKLDMSKAYDRVVW 847
             ++     E F+A+K D+SKAYDRV W
Sbjct: 560  LSSNNKCSEEFIAIKTDISKAYDRVEW 586


>gb|AAB84340.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1094

 Score =  224 bits (571), Expect = 2e-56
 Identities = 110/272 (40%), Positives = 166/272 (61%), Gaps = 3/272 (1%)
 Frame = +2

Query: 41  WKQLKVHLD---EVYKEEEEFWSKKSRISWLKERDKNTKFFHAVIAESRKKNQIECLKNE 211
           W Q+ +  D   + Y+EEE+FW  KSR  W+   DKN+KFF A +  +R  N +  L +E
Sbjct: 44  WTQISLLQDVLGDAYREEEDFWRLKSRDKWMVGGDKNSKFFQATVKANRVSNSLRFLVDE 103

Query: 212 FGTESHSNLEIAEEIAKYFDNLFTTIYPKDNAQILDGIPRTMTESMNANLTRAVEDQEIK 391
            G E   N E  +    +F++LF++ YP     +L+G  + +TE MN +LT+ V +QEI 
Sbjct: 104 NGNEQTVNREKGKIAVTFFEDLFSSSYPSSMDSVLEGFNKRVTEDMNQDLTKKVNEQEIY 163

Query: 392 KTLFSMHPHKAPEPDSMPPFFFQKYWNVISNDVCNAVKSFFHSTHMLAAFNHTLISLIPK 571
           K +FS++   AP PD     FFQ+ W ++ N + + ++ FF +  +   +NHT + LIPK
Sbjct: 164 KAVFSINAESAPGPDGFTALFFQRQWPLVKNQIISDIELFFQTGILPEDWNHTHLCLIPK 223

Query: 572 IKNPSQVSDFRPVSHCNVVYKIISKILAERLKPLLSNCISENQFAFVPGRQILDNVVVAH 751
           I  P++++D RP+S C+V+YKIISKIL+ RLK  L   +S  Q AFV  R + DN+++AH
Sbjct: 224 ITKPARMADIRPISLCSVMYKIISKILSARLKKYLPVIVSPTQSAFVAERLVSDNIILAH 283

Query: 752 KFLHH*NTVRSGKESFLALKLDMSKAYDRVVW 847
           + +H+  T     + F+  K DMSKAYDRV W
Sbjct: 284 EIVHNLRTNEKISKDFMVFKTDMSKAYDRVEW 315


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