BLASTX nr result
ID: Cephaelis21_contig00031294
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cephaelis21_contig00031294
(905 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAT38805.1| hypothetical protein SDM1_47t00008 [Solanum demis... 102 1e-19
ref|XP_002459639.1| hypothetical protein SORBIDRAFT_02g007880 [S... 100 8e-19
gb|AAP53786.1| retrotransposon protein, putative, LINE subclass ... 95 3e-17
ref|XP_002442592.1| hypothetical protein SORBIDRAFT_08g022600 [S... 94 3e-17
gb|AAM94293.1| putative reverse transcriptase [Sorghum bicolor] 94 3e-17
>gb|AAT38805.1| hypothetical protein SDM1_47t00008 [Solanum demissum]
Length = 1155
Score = 102 bits (254), Expect = 1e-19
Identities = 73/295 (24%), Positives = 119/295 (40%)
Frame = +3
Query: 21 LEQFEVATGQKANLQKSSFIISKFASPRAVLWIREFTRIPKGSLPLKYLGNVVFKGRLKW 200
L +E +GQ N KS F ++ A + I+ T + P+KYLG + G+ K
Sbjct: 624 LHIYENTSGQLINKNKSCFSVANNAKQNFIAKIKLITCMNHQEFPIKYLGCPLISGKKKT 683
Query: 201 VYFQHLVDKFNKRLAGWQGQLLSPGDRIILICHVLTAIPPFVFSSMEPPKGILQQLEQFC 380
+F LV R+ GW +LLS G R++LI HVL AIP + +++P KG L +E +
Sbjct: 684 SHFNELVKNIINRIKGWHNKLLSTGGRVVLIKHVLLAIPTHLLVALQPTKGTLDNIEIYL 743
Query: 381 SNFLWQTCAGSPRRVWRAWHGVPKPVLENRHGFRDFHTTVRAYSCKLW*KW*THDGLWSA 560
+ F W + + W AW + P E R A+S K
Sbjct: 744 ARFFWSSKEEGGKHHWIAWRTLCLPFEEGWINIRRIGDVCNAFSYK-------------- 789
Query: 561 FVNLVSWEKSVVGHRLQGVEEFIRSKVLVLVKAGTCSFLYDNWTGQGALVDVW*LDNVHD 740
E +++ ++ +F DNW+ G L + L
Sbjct: 790 --------------------EIAENEIKRILGRDEVNFWCDNWSQIGPLYKL--LPTGFS 827
Query: 741 LRTLGVRDVYHRGEWDALALGEFLPTVAIFFIVQSFQFQLSDEPDVIIWKPPNSG 905
+ + V+++ G+W+ L LP I ++E D +W P ++G
Sbjct: 828 VHNIMVKEILGNGKWNWSILQNQLPNQIKVMITGLGLNLNNEEQDKPVWSPTSAG 882
>ref|XP_002459639.1| hypothetical protein SORBIDRAFT_02g007880 [Sorghum bicolor]
gi|241923016|gb|EER96160.1| hypothetical protein
SORBIDRAFT_02g007880 [Sorghum bicolor]
Length = 475
Score = 99.8 bits (247), Expect = 8e-19
Identities = 66/181 (36%), Positives = 96/181 (53%), Gaps = 4/181 (2%)
Frame = +3
Query: 3 RSLFQILEQFEVATGQKANLQKSSFIISKFASPRAVLWIREFTRIPKGSLPLKYLGNVVF 182
++LF ILEQF ATG K NL+K S + A + F + S P+ YLG +
Sbjct: 76 QALFGILEQFGSATGLKLNLEKCSVAPIRCAGTNLDQILESFVG-KRVSFPITYLGLPLT 134
Query: 183 KGRLKWVYFQHLVDKFNKRLAGWQGQLLSPGDRIILICHVLTAIPPFVFSSMEPPKGILQ 362
GRLK V+ Q VDK +LAGWQG+LL+P R L+ VL++IP ++ +SM+ P+ + +
Sbjct: 135 LGRLKMVHVQGTVDKSRTKLAGWQGRLLNPAGRRELVSSVLSSIPTYLMASMKVPRQLKE 194
Query: 363 QLEQFCSNFLW---QTCAGSPRRVWRAWHGVPKPVLENRHGFRDFHTTVRAYSCK-LW*K 530
+++ FLW + G +V AW V KP+ G D RA + LW +
Sbjct: 195 DIDKIRRRFLWAGDKELTGGKCKV--AWTTVAKPIDFGGLGIIDLERFSRALRIRWLWFQ 252
Query: 531 W 533
W
Sbjct: 253 W 253
>gb|AAP53786.1| retrotransposon protein, putative, LINE subclass [Oryza sativa
Japonica Group]
Length = 419
Score = 94.7 bits (234), Expect = 3e-17
Identities = 60/187 (32%), Positives = 93/187 (49%), Gaps = 4/187 (2%)
Frame = +3
Query: 6 SLFQILEQFEVATGQKANLQKSSFIISKFASPRAVLWIREFTRIPKGSLPLKYLGNVVFK 185
+L IL+ F ATG + NL KSS + K A + F +G+ P+ YLG +
Sbjct: 112 NLISILKFFGEATGLQVNLHKSSVVPIKCAEQNLSEVLENFNG-QRGNFPITYLGLPLTP 170
Query: 186 GRLKWVYFQHLVDKFNKRLAGWQGQLLSPGDRIILICHVLTAIPPFVFSSMEPPKGILQQ 365
GR+K ++ Q ++DK RLAGW+ +L+ R L+ VL++IP + ++++PPK L
Sbjct: 171 GRIKRIHLQPVMDKLQSRLAGWKRKLIQQSGRKTLVTSVLSSIPTYFLTALKPPKQFLTD 230
Query: 366 LEQFCSNFLW---QTCAGSPRRVWRAWHGVPKPVLENRHGFRDFHTTVRAYSCK-LW*KW 533
+++ FLW Q +G +V W V P+ G D RA + LW +W
Sbjct: 231 MDKISKKFLWAGDQEISGGKCKV--NWKKVCSPINTGGLGVLDLDKFARALRLRWLWFEW 288
Query: 534 *THDGLW 554
D W
Sbjct: 289 ECPDKPW 295
>ref|XP_002442592.1| hypothetical protein SORBIDRAFT_08g022600 [Sorghum bicolor]
gi|241943285|gb|EES16430.1| hypothetical protein
SORBIDRAFT_08g022600 [Sorghum bicolor]
Length = 1192
Score = 94.4 bits (233), Expect = 3e-17
Identities = 71/242 (29%), Positives = 113/242 (46%), Gaps = 4/242 (1%)
Frame = +3
Query: 6 SLFQILEQFEVATGQKANLQKSSFIISKFASPRAVLWIREFTRIPKGSLPLKYLGNVVFK 185
+LF+ILEQF TG K N+ K + + A + + E R K + P+ YLG +
Sbjct: 853 ALFEILEQFGATTGLKLNIGKCTVAPIRCAEIN-LDHVLEGYRGNKTNFPITYLGLPLSL 911
Query: 186 GRLKWVYFQHLVDKFNKRLAGWQGQLLSPGDRIILICHVLTAIPPFVFSSMEPPKGILQQ 365
GRLK V+ Q +VDK RLA WQG+L++P R L+ VL+++P ++ ++++ PK ++
Sbjct: 912 GRLKVVHLQKIVDKSRSRLAAWQGRLMNPAGRRELVRSVLSSMPVYLMTTLKAPKQLIAD 971
Query: 366 LEQFCSNFLW---QTCAGSPRRVWRAWHGVPKPVLENRHGFRDFHTTVRAYSCK-LW*KW 533
++Q FLW +G +V AW V KP G D RA + LW +W
Sbjct: 972 IDQMRRRFLWAGDNEISGGKCKV--AWTAVAKPEEFGGLGIIDLDKFSRALRLRWLWFQW 1029
Query: 534 *THDGLWSAFVNLVSWEKSVVGHRLQGVEEFIRSKVLVLVKAGTCSFLYDNWTGQGALVD 713
+ W+ S + V F + + + SF + +W A
Sbjct: 1030 TKPERPWNG---------SELPVNADDVALFNAATTVTVRDGRKASFWHSSWIEGRAPAS 1080
Query: 714 VW 719
+W
Sbjct: 1081 LW 1082
>gb|AAM94293.1| putative reverse transcriptase [Sorghum bicolor]
Length = 1323
Score = 94.4 bits (233), Expect = 3e-17
Identities = 71/242 (29%), Positives = 113/242 (46%), Gaps = 4/242 (1%)
Frame = +3
Query: 6 SLFQILEQFEVATGQKANLQKSSFIISKFASPRAVLWIREFTRIPKGSLPLKYLGNVVFK 185
+LF+ILEQF TG K N+ K + + A + + E R K + P+ YLG +
Sbjct: 853 ALFEILEQFGATTGLKLNIGKCTVAPIRCAEIN-LDHVLEGYRGNKTNFPITYLGLPLSL 911
Query: 186 GRLKWVYFQHLVDKFNKRLAGWQGQLLSPGDRIILICHVLTAIPPFVFSSMEPPKGILQQ 365
GRLK V+ Q +VDK RLA WQG+L++P R L+ VL+++P ++ ++++ PK ++
Sbjct: 912 GRLKVVHLQKIVDKSRSRLAAWQGRLMNPAGRRELVRSVLSSMPVYLMTTLKAPKQLIAD 971
Query: 366 LEQFCSNFLW---QTCAGSPRRVWRAWHGVPKPVLENRHGFRDFHTTVRAYSCK-LW*KW 533
++Q FLW +G +V AW V KP G D RA + LW +W
Sbjct: 972 IDQMRRRFLWAGDNEISGGKCKV--AWTAVAKPEEFGGLGIIDLDKFSRALRLRWLWFQW 1029
Query: 534 *THDGLWSAFVNLVSWEKSVVGHRLQGVEEFIRSKVLVLVKAGTCSFLYDNWTGQGALVD 713
+ W+ S + V F + + + SF + +W A
Sbjct: 1030 TKPERPWNG---------SELPVNADDVALFNAATTVTVRDGRKASFWHSSWIEGRAPAS 1080
Query: 714 VW 719
+W
Sbjct: 1081 LW 1082