BLASTX nr result

ID: Cephaelis21_contig00031271 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00031271
         (202 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513192.1| 60S ribosomal protein L6, putative [Ricinus ...   111   5e-23
ref|XP_002524802.1| 60S ribosomal protein L6, putative [Ricinus ...   111   5e-23
ref|XP_004154716.1| PREDICTED: 60S ribosomal protein L6-like [Cu...   109   3e-22
ref|XP_004149609.1| PREDICTED: 60S ribosomal protein L6-like [Cu...   109   3e-22
gb|ABX71676.1| 60S ribosomal protein L6-like protein [Panax quin...   109   3e-22

>ref|XP_002513192.1| 60S ribosomal protein L6, putative [Ricinus communis]
           gi|223547690|gb|EEF49183.1| 60S ribosomal protein L6,
           putative [Ricinus communis]
          Length = 233

 Score =  111 bits (278), Expect = 5e-23
 Identities = 53/66 (80%), Positives = 60/66 (90%)
 Frame = +3

Query: 3   RVVFLKQLSSGLLLVNGPFKINGVPLRRINQSYVIATSTKIDISSATMDKFGEKYFSKQV 182
           RVVFLKQLSSGLLL+ GPFKINGVPLRR+NQSYVIATSTK+DIS   +DKF +K+F+KQ 
Sbjct: 106 RVVFLKQLSSGLLLITGPFKINGVPLRRVNQSYVIATSTKVDISGVNVDKFDDKFFAKQA 165

Query: 183 EKKKKK 200
           EKKKKK
Sbjct: 166 EKKKKK 171


>ref|XP_002524802.1| 60S ribosomal protein L6, putative [Ricinus communis]
           gi|223535986|gb|EEF37645.1| 60S ribosomal protein L6,
           putative [Ricinus communis]
          Length = 231

 Score =  111 bits (278), Expect = 5e-23
 Identities = 54/66 (81%), Positives = 59/66 (89%)
 Frame = +3

Query: 3   RVVFLKQLSSGLLLVNGPFKINGVPLRRINQSYVIATSTKIDISSATMDKFGEKYFSKQV 182
           RVVFLKQLSSGLLLV GPFKINGVPLRR+NQSYVIATSTK+DIS    DKF +KYF+KQ 
Sbjct: 104 RVVFLKQLSSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNADKFDDKYFAKQA 163

Query: 183 EKKKKK 200
           EK+KKK
Sbjct: 164 EKRKKK 169


>ref|XP_004154716.1| PREDICTED: 60S ribosomal protein L6-like [Cucumis sativus]
          Length = 231

 Score =  109 bits (272), Expect = 3e-22
 Identities = 51/66 (77%), Positives = 60/66 (90%)
 Frame = +3

Query: 3   RVVFLKQLSSGLLLVNGPFKINGVPLRRINQSYVIATSTKIDISSATMDKFGEKYFSKQV 182
           RVVFLKQL SGLLLV GPFK+NGVPLRR+NQSYVIATSTK+DI+   ++KFG+KYFSK+V
Sbjct: 104 RVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEV 163

Query: 183 EKKKKK 200
            +KKKK
Sbjct: 164 HQKKKK 169


>ref|XP_004149609.1| PREDICTED: 60S ribosomal protein L6-like [Cucumis sativus]
           gi|449533212|ref|XP_004173570.1| PREDICTED: 60S
           ribosomal protein L6-like [Cucumis sativus]
          Length = 231

 Score =  109 bits (272), Expect = 3e-22
 Identities = 51/66 (77%), Positives = 61/66 (92%)
 Frame = +3

Query: 3   RVVFLKQLSSGLLLVNGPFKINGVPLRRINQSYVIATSTKIDISSATMDKFGEKYFSKQV 182
           RVVFLKQL SGLLLV GPFK+NGVPLRR+NQSYVIATSTK+DI+  +++KF +KYFSK+V
Sbjct: 104 RVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDITGVSVEKFDDKYFSKEV 163

Query: 183 EKKKKK 200
           +KKKKK
Sbjct: 164 QKKKKK 169


>gb|ABX71676.1| 60S ribosomal protein L6-like protein [Panax quinquefolius]
          Length = 233

 Score =  109 bits (272), Expect = 3e-22
 Identities = 50/66 (75%), Positives = 61/66 (92%)
 Frame = +3

Query: 3   RVVFLKQLSSGLLLVNGPFKINGVPLRRINQSYVIATSTKIDISSATMDKFGEKYFSKQV 182
           RVVFLKQL+SGLLL+ GPFKINGVPLRR+NQSYVIATSTK+D+S   ++K+ +KYF+K+V
Sbjct: 106 RVVFLKQLTSGLLLITGPFKINGVPLRRVNQSYVIATSTKVDVSGVNVEKYDDKYFAKEV 165

Query: 183 EKKKKK 200
           EKKKKK
Sbjct: 166 EKKKKK 171


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