BLASTX nr result

ID: Cephaelis21_contig00031229 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00031229
         (987 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633446.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH...   249   9e-64
emb|CBI25341.3| unnamed protein product [Vitis vinifera]              249   9e-64
ref|XP_003519219.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH...   244   2e-62
ref|XP_003615435.1| ATP-dependent helicase, putative [Medicago t...   239   6e-61
ref|XP_002329202.1| chromatin remodeling complex subunit [Populu...   230   5e-58

>ref|XP_003633446.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH-like [Vitis vinifera]
          Length = 1704

 Score =  249 bits (635), Expect = 9e-64
 Identities = 128/235 (54%), Positives = 167/235 (71%), Gaps = 1/235 (0%)
 Frame = +3

Query: 273 MGRKKQ-RPRRAGGLQGPNSEAELDEQDVTVVEPIKDDNLVVNTDNPFFVAVDKANWVVT 449
           MGR+KQ +P R+ G+       E  E ++   +     + V + + P FV VD+  W  +
Sbjct: 1   MGRRKQPKPHRSVGVVERLETQETAEGELNSQQEHAQGDEVGDAETPLFVEVDRTGWG-S 59

Query: 450 SEHLDISEIVLSNLEINPEFYGYRASEEFYHESRFCLRFRLDNVGEFLNRIKLGHWPELS 629
            EHLDISEIVL++L +  EF+GY   E FY  S+ CLRFRL N  +F+ RI+LGHWP ++
Sbjct: 60  GEHLDISEIVLNDLNLREEFHGYSLGEGFYENSKCCLRFRLCNANQFVGRIRLGHWPVVA 119

Query: 630 ASSVNLQFVERKVTEEGMGNVSVMLSGNLDGPDEAVSGLVHLASLNFLTLRPVLGFTLLE 809
           ASS++L+FVE++V+EEG+   SV+LSG  DGPDE VSGLVHL+ L  LTLRPVLG T  E
Sbjct: 120 ASSISLEFVEKRVSEEGIETDSVILSGIFDGPDEGVSGLVHLSRLKLLTLRPVLGVTFSE 179

Query: 810 DVQSLRMRVEILKSAFDACGSLVDETKKLWKKSMMGVMAWLRPEVLTAEARYGYA 974
            V  +R+RVEIL++AFDAC SL+D ++ LWKKSMM VMAWLRPEV T+EARYG A
Sbjct: 180 GVSFVRLRVEILRTAFDACESLLDNSRPLWKKSMMSVMAWLRPEVTTSEARYGVA 234


>emb|CBI25341.3| unnamed protein product [Vitis vinifera]
          Length = 1717

 Score =  249 bits (635), Expect = 9e-64
 Identities = 128/235 (54%), Positives = 167/235 (71%), Gaps = 1/235 (0%)
 Frame = +3

Query: 273 MGRKKQ-RPRRAGGLQGPNSEAELDEQDVTVVEPIKDDNLVVNTDNPFFVAVDKANWVVT 449
           MGR+KQ +P R+ G+       E  E ++   +     + V + + P FV VD+  W  +
Sbjct: 1   MGRRKQPKPHRSVGVVERLETQETAEGELNSQQEHAQGDEVGDAETPLFVEVDRTGWG-S 59

Query: 450 SEHLDISEIVLSNLEINPEFYGYRASEEFYHESRFCLRFRLDNVGEFLNRIKLGHWPELS 629
            EHLDISEIVL++L +  EF+GY   E FY  S+ CLRFRL N  +F+ RI+LGHWP ++
Sbjct: 60  GEHLDISEIVLNDLNLREEFHGYSLGEGFYENSKCCLRFRLCNANQFVGRIRLGHWPVVA 119

Query: 630 ASSVNLQFVERKVTEEGMGNVSVMLSGNLDGPDEAVSGLVHLASLNFLTLRPVLGFTLLE 809
           ASS++L+FVE++V+EEG+   SV+LSG  DGPDE VSGLVHL+ L  LTLRPVLG T  E
Sbjct: 120 ASSISLEFVEKRVSEEGIETDSVILSGIFDGPDEGVSGLVHLSRLKLLTLRPVLGVTFSE 179

Query: 810 DVQSLRMRVEILKSAFDACGSLVDETKKLWKKSMMGVMAWLRPEVLTAEARYGYA 974
            V  +R+RVEIL++AFDAC SL+D ++ LWKKSMM VMAWLRPEV T+EARYG A
Sbjct: 180 GVSFVRLRVEILRTAFDACESLLDNSRPLWKKSMMSVMAWLRPEVTTSEARYGVA 234


>ref|XP_003519219.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH-like [Glycine max]
          Length = 1600

 Score =  244 bits (623), Expect = 2e-62
 Identities = 125/242 (51%), Positives = 176/242 (72%), Gaps = 4/242 (1%)
 Frame = +3

Query: 273 MGRKKQRPRRAGGL---QGPNSEAELDEQDVTVV-EPIKDDNLVVNTDNPFFVAVDKANW 440
           MGR+K +P+RAGG+       +E ELD+Q+V    +  K D+  +  D P+FV VD+  W
Sbjct: 1   MGRQKSKPQRAGGIILETNAAAETELDKQNVIEGGKETKGDSSGI--DKPYFVEVDRCGW 58

Query: 441 VVTSEHLDISEIVLSNLEINPEFYGYRASEEFYHESRFCLRFRLDNVGEFLNRIKLGHWP 620
           + +SEHLDISE+VLS+L +   F G+  SE+FY + ++ LRF++ NV   L RIKLGHWP
Sbjct: 59  L-SSEHLDISEVVLSDLNLREGFSGFELSEDFYRDQQYLLRFQVCNVSNVLGRIKLGHWP 117

Query: 621 ELSASSVNLQFVERKVTEEGMGNVSVMLSGNLDGPDEAVSGLVHLASLNFLTLRPVLGFT 800
            +  + ++L+FV R+VT + +   +V+LSG  DGPDE V+GL+HLASL F+TLRPVLG  
Sbjct: 118 VIPYTDIHLEFV-RRVTIDHVETYTVLLSGIFDGPDEGVTGLLHLASLKFVTLRPVLGAR 176

Query: 801 LLEDVQSLRMRVEILKSAFDACGSLVDETKKLWKKSMMGVMAWLRPEVLTAEARYGYAGA 980
           L E++ SLR+RVE+LKSAFDAC SL+D +++LWKKSM+ VM+WLRPE++T+E RYG+   
Sbjct: 177 LSEEISSLRIRVEVLKSAFDACESLLDSSRQLWKKSMVNVMSWLRPEIMTSEVRYGFGTC 236

Query: 981 TK 986
            K
Sbjct: 237 MK 238


>ref|XP_003615435.1| ATP-dependent helicase, putative [Medicago truncatula]
           gi|355516770|gb|AES98393.1| ATP-dependent helicase,
           putative [Medicago truncatula]
          Length = 1764

 Score =  239 bits (611), Expect = 6e-61
 Identities = 122/237 (51%), Positives = 169/237 (71%), Gaps = 3/237 (1%)
 Frame = +3

Query: 273 MGRKKQRPRRAGGL---QGPNSEAELDEQDVTVVEPIKDDNLVVNTDNPFFVAVDKANWV 443
           MGR+K +P R+GG+      ++E EL+          K++N   +   P+FV VD++ W+
Sbjct: 1   MGRRKSKPHRSGGIIVETNASAETELEVGG-------KENNDFGDIYKPYFVEVDRSGWL 53

Query: 444 VTSEHLDISEIVLSNLEINPEFYGYRASEEFYHESRFCLRFRLDNVGEFLNRIKLGHWPE 623
            + EHLDISEIVL +L I   FYG+  SE+FY + +F LRFRL N+G  L RIKLGHWP 
Sbjct: 54  -SDEHLDISEIVLRDLNIGEGFYGFELSEDFYQDPQFSLRFRLCNIGSDLGRIKLGHWPV 112

Query: 624 LSASSVNLQFVERKVTEEGMGNVSVMLSGNLDGPDEAVSGLVHLASLNFLTLRPVLGFTL 803
           L  + ++L+FV+R   ++     +V+LSG  DGPDE+VSGLVHLAS+ F+TLR VLG  L
Sbjct: 113 LPYTDIHLEFVKRASVDD-TETCTVLLSGIFDGPDESVSGLVHLASMKFVTLRAVLGIKL 171

Query: 804 LEDVQSLRMRVEILKSAFDACGSLVDETKKLWKKSMMGVMAWLRPEVLTAEARYGYA 974
            +D+ SLRMRVE+LKSAFDAC SL++ ++K WKKSMM VM+WLRPE++T+E +YG++
Sbjct: 172 SDDIPSLRMRVEVLKSAFDACESLIEGSRKPWKKSMMNVMSWLRPEIMTSEVKYGFS 228


>ref|XP_002329202.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222870983|gb|EEF08114.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 1320

 Score =  230 bits (586), Expect = 5e-58
 Identities = 118/245 (48%), Positives = 167/245 (68%), Gaps = 7/245 (2%)
 Frame = +3

Query: 273 MGRKKQ-RPRRAGGL-----QGPNSEAELDEQDVTVVEPIKDDNLVVNTDNPFFVAVDKA 434
           MGR+KQ RP R+GGL        ++ AEL  Q        +   LV   + P+FV V++ 
Sbjct: 1   MGRRKQARPHRSGGLIIQNNAAASASAELKNQRKASSSDAQPTELVGIDEQPYFVEVERN 60

Query: 435 NWVVTSEHLDISEIVLSNLEINPEFYGYRASEEFYHESRFCLRFRLDNVGE-FLNRIKLG 611
           +W  ++ H D SE+VL  L +  E+  +R ++ FYH+S++ LRFR+ NV +  L+RIKLG
Sbjct: 61  SWA-SNHHRDASELVLHGLNLRQEYSSFRVTDGFYHDSKYSLRFRVSNVKQSVLSRIKLG 119

Query: 612 HWPELSASSVNLQFVERKVTEEGMGNVSVMLSGNLDGPDEAVSGLVHLASLNFLTLRPVL 791
           HWP  S+S ++L+ +E+ + EE     SV+ SG+ DGPDE ++GLVHL ++ FLTLRPVL
Sbjct: 120 HWPVFSSSDISLELIEKSMVEEDREVESVIFSGSFDGPDEGITGLVHLTNMEFLTLRPVL 179

Query: 792 GFTLLEDVQSLRMRVEILKSAFDACGSLVDETKKLWKKSMMGVMAWLRPEVLTAEARYGY 971
           G    E +  LRMRVEIL+ AFDAC SL++ T+++WKKSMM VMAWLRPEV+T+EARY +
Sbjct: 180 GVDFSEKMTPLRMRVEILEKAFDACESLLESTRQIWKKSMMNVMAWLRPEVMTSEARYRH 239

Query: 972 AGATK 986
           A +T+
Sbjct: 240 AKSTE 244


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