BLASTX nr result

ID: Cephaelis21_contig00031221 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00031221
         (227 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521823.1| PREDICTED: heterogeneous nuclear ribonucleop...    66   3e-16
ref|XP_002264834.1| PREDICTED: heterogeneous nuclear ribonucleop...    64   2e-15
gb|ABD32695.2| RNA-binding region RNP-1 (RNA recognition motif);...    67   7e-15
ref|XP_003626597.1| RNA-binding protein [Medicago truncatula] gi...    67   7e-15
gb|AFK42956.1| unknown [Lotus japonicus]                               66   7e-15

>ref|XP_003521823.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like [Glycine
           max]
          Length = 483

 Score = 65.9 bits (159), Expect(2) = 3e-16
 Identities = 29/30 (96%), Positives = 30/30 (100%)
 Frame = -3

Query: 225 QPMIYGRGPMPAGMQMVPMVLPDGRIGYVL 136
           QPMIYGRGPMPAGMQMVPM+LPDGRIGYVL
Sbjct: 407 QPMIYGRGPMPAGMQMVPMMLPDGRIGYVL 436



 Score = 43.9 bits (102), Expect(2) = 3e-16
 Identities = 18/20 (90%), Positives = 19/20 (95%)
 Frame = -1

Query: 65  QQPGVQMPPVRPRRNDRSNG 6
           QQPGVQ+PP RPRRNDRSNG
Sbjct: 437 QQPGVQVPPARPRRNDRSNG 456


>ref|XP_002264834.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q [Vitis
           vinifera] gi|296088998|emb|CBI38701.3| unnamed protein
           product [Vitis vinifera]
          Length = 476

 Score = 63.5 bits (153), Expect(2) = 2e-15
 Identities = 28/30 (93%), Positives = 29/30 (96%)
 Frame = -3

Query: 225 QPMIYGRGPMPAGMQMVPMVLPDGRIGYVL 136
           QP+IYGRGPMPAGM MVPMVLPDGRIGYVL
Sbjct: 402 QPVIYGRGPMPAGMHMVPMVLPDGRIGYVL 431



 Score = 43.5 bits (101), Expect(2) = 2e-15
 Identities = 18/21 (85%), Positives = 20/21 (95%)
 Frame = -1

Query: 65  QQPGVQMPPVRPRRNDRSNGA 3
           QQPGVQMPP RPRRN+RSNG+
Sbjct: 432 QQPGVQMPPPRPRRNERSNGS 452


>gb|ABD32695.2| RNA-binding region RNP-1 (RNA recognition motif); Calcium-binding
           EF-hand [Medicago truncatula]
          Length = 559

 Score = 67.0 bits (162), Expect(2) = 7e-15
 Identities = 30/30 (100%), Positives = 30/30 (100%)
 Frame = -3

Query: 225 QPMIYGRGPMPAGMQMVPMVLPDGRIGYVL 136
           QPMIYGRGPMPAGMQMVPMVLPDGRIGYVL
Sbjct: 488 QPMIYGRGPMPAGMQMVPMVLPDGRIGYVL 517



 Score = 38.1 bits (87), Expect(2) = 7e-15
 Identities = 16/20 (80%), Positives = 17/20 (85%)
 Frame = -1

Query: 65  QQPGVQMPPVRPRRNDRSNG 6
           QQPGVQ+P  RPRRNDR NG
Sbjct: 518 QQPGVQVPGPRPRRNDRGNG 537


>ref|XP_003626597.1| RNA-binding protein [Medicago truncatula]
           gi|355501612|gb|AES82815.1| RNA-binding protein
           [Medicago truncatula]
          Length = 479

 Score = 67.0 bits (162), Expect(2) = 7e-15
 Identities = 30/30 (100%), Positives = 30/30 (100%)
 Frame = -3

Query: 225 QPMIYGRGPMPAGMQMVPMVLPDGRIGYVL 136
           QPMIYGRGPMPAGMQMVPMVLPDGRIGYVL
Sbjct: 408 QPMIYGRGPMPAGMQMVPMVLPDGRIGYVL 437



 Score = 38.1 bits (87), Expect(2) = 7e-15
 Identities = 16/20 (80%), Positives = 17/20 (85%)
 Frame = -1

Query: 65  QQPGVQMPPVRPRRNDRSNG 6
           QQPGVQ+P  RPRRNDR NG
Sbjct: 438 QQPGVQVPGPRPRRNDRGNG 457


>gb|AFK42956.1| unknown [Lotus japonicus]
          Length = 232

 Score = 65.9 bits (159), Expect(2) = 7e-15
 Identities = 29/30 (96%), Positives = 30/30 (100%)
 Frame = -3

Query: 225 QPMIYGRGPMPAGMQMVPMVLPDGRIGYVL 136
           QPM+YGRGPMPAGMQMVPMVLPDGRIGYVL
Sbjct: 158 QPMMYGRGPMPAGMQMVPMVLPDGRIGYVL 187



 Score = 39.3 bits (90), Expect(2) = 7e-15
 Identities = 16/20 (80%), Positives = 18/20 (90%)
 Frame = -1

Query: 65  QQPGVQMPPVRPRRNDRSNG 6
           QQPGVQ+P  RPRRN+RSNG
Sbjct: 188 QQPGVQVPAARPRRNERSNG 207


Top