BLASTX nr result

ID: Cephaelis21_contig00031214 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00031214
         (481 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002881791.1| ATPase, coupled to transmembrane movement of...    69   4e-10
ref|XP_002308937.1| ABC transporter family, cholesterol/phosphol...    69   4e-10
ref|NP_850354.2| ABC transporter A family member 1 [Arabidopsis ...    68   9e-10
gb|AAK39643.3| ATP-binding cassette transporter AtABCA1 [Arabido...    68   9e-10
gb|AAC02761.3| hypothetical protein [Arabidopsis thaliana]             68   9e-10

>ref|XP_002881791.1| ATPase, coupled to transmembrane movement of substances
           [Arabidopsis lyrata subsp. lyrata]
           gi|297327630|gb|EFH58050.1| ATPase, coupled to
           transmembrane movement of substances [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1914

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 35/40 (87%), Positives = 35/40 (87%)
 Frame = +3

Query: 360 SSSRQLKAMLRKNWLLKIRHPFVTLMEILLPTTVMLLLIA 479
           SS RQLKAMLRKNWLLK RHPFVT  EILLPT VMLLLIA
Sbjct: 3   SSMRQLKAMLRKNWLLKTRHPFVTSAEILLPTLVMLLLIA 42


>ref|XP_002308937.1| ABC transporter family, cholesterol/phospholipid flippase [Populus
           trichocarpa] gi|222854913|gb|EEE92460.1| ABC transporter
           family, cholesterol/phospholipid flippase [Populus
           trichocarpa]
          Length = 1891

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 33/40 (82%), Positives = 37/40 (92%)
 Frame = +3

Query: 360 SSSRQLKAMLRKNWLLKIRHPFVTLMEILLPTTVMLLLIA 479
           +S+RQL+AMLRKNWLLKIRHPF+T  EILLPT VMLLLIA
Sbjct: 3   NSTRQLRAMLRKNWLLKIRHPFITSAEILLPTIVMLLLIA 42


>ref|NP_850354.2| ABC transporter A family member 1 [Arabidopsis thaliana]
           gi|75327922|sp|Q84M24.2|AB1A_ARATH RecName: Full=ABC
           transporter A family member 1; Short=ABC transporter
           ABCA.1; Short=AtABCA1; AltName: Full=ABC one homolog
           protein 1; Short=AtAOH1 gi|45504175|dbj|BAC75958.2|
           AtABCA1 [Arabidopsis thaliana]
           gi|330254923|gb|AEC10017.1| ABC transporter A family
           member 1 [Arabidopsis thaliana]
          Length = 1882

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 34/40 (85%), Positives = 34/40 (85%)
 Frame = +3

Query: 360 SSSRQLKAMLRKNWLLKIRHPFVTLMEILLPTTVMLLLIA 479
           SS RQ KAMLRKNWLLK RHPFVT  EILLPT VMLLLIA
Sbjct: 3   SSKRQFKAMLRKNWLLKTRHPFVTSAEILLPTIVMLLLIA 42


>gb|AAK39643.3| ATP-binding cassette transporter AtABCA1 [Arabidopsis thaliana]
          Length = 1882

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 34/40 (85%), Positives = 34/40 (85%)
 Frame = +3

Query: 360 SSSRQLKAMLRKNWLLKIRHPFVTLMEILLPTTVMLLLIA 479
           SS RQ KAMLRKNWLLK RHPFVT  EILLPT VMLLLIA
Sbjct: 3   SSKRQFKAMLRKNWLLKTRHPFVTSAEILLPTIVMLLLIA 42


>gb|AAC02761.3| hypothetical protein [Arabidopsis thaliana]
          Length = 750

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 34/40 (85%), Positives = 34/40 (85%)
 Frame = +3

Query: 360 SSSRQLKAMLRKNWLLKIRHPFVTLMEILLPTTVMLLLIA 479
           SS RQ KAMLRKNWLLK RHPFVT  EILLPT VMLLLIA
Sbjct: 3   SSKRQFKAMLRKNWLLKTRHPFVTSAEILLPTIVMLLLIA 42


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