BLASTX nr result

ID: Cephaelis21_contig00031144 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00031144
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEK71846.1| hypothetical chloroplast RF2 [Aextoxicon punctatum]     59   1e-09
emb|CAA30743.1| unnamed protein product [Spinacia oleracea]            58   3e-09
ref|NP_055004.1| Ycf2 [Spinacia oleracea] gi|19855392|sp|P08973....    58   3e-09
ref|YP_004935596.1| ycf2 (chloroplast) [Eleutherococcus senticos...    57   9e-09
ref|YP_087009.1| Ycf2 [Panax ginseng] gi|52220874|ref|YP_087028....    57   9e-09

>gb|AEK71846.1| hypothetical chloroplast RF2 [Aextoxicon punctatum]
          Length = 2316

 Score = 59.3 bits (142), Expect(2) = 1e-09
 Identities = 31/41 (75%), Positives = 33/41 (80%)
 Frame = +3

Query: 3    FELLSNH*R*LRTNSLLANVFFRSNTISESYQYLSNIFLPN 125
            FELL NH R LRTNS L+N  FRSNT SESYQYLSN+FL N
Sbjct: 2233 FELLINHQRWLRTNSSLSNGSFRSNTPSESYQYLSNLFLSN 2273



 Score = 27.7 bits (60), Expect(2) = 1e-09
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = +1

Query: 163  KKMTLSDNMKIIKFMYRHTNFPSLNWKDMW 252
            K+    D MKI  FM +  +FP L+ KDMW
Sbjct: 2287 KRWLFPDEMKI-GFMEQEKDFPFLSRKDMW 2315


>emb|CAA30743.1| unnamed protein product [Spinacia oleracea]
          Length = 2131

 Score = 58.2 bits (139), Expect(2) = 3e-09
 Identities = 30/41 (73%), Positives = 33/41 (80%)
 Frame = +3

Query: 3    FELLSNH*R*LRTNSLLANVFFRSNTISESYQYLSNIFLPN 125
            FELL N  R LRTNS L+N  FRSNT+SESYQYLSN+FL N
Sbjct: 2048 FELLINRQRWLRTNSSLSNGSFRSNTLSESYQYLSNLFLSN 2088



 Score = 27.7 bits (60), Expect(2) = 3e-09
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = +1

Query: 163  KKMTLSDNMKIIKFMYRHTNFPSLNWKDMW 252
            K+    D MKI  FM    +FP L+ KDMW
Sbjct: 2102 KRWLFPDEMKI-GFMQEEKDFPFLSRKDMW 2130


>ref|NP_055004.1| Ycf2 [Spinacia oleracea] gi|19855392|sp|P08973.2|YCF2_SPIOL RecName:
            Full=Protein ycf2 gi|7636179|emb|CAB88802.1| ycf2 protein
            [Spinacia oleracea]
          Length = 2131

 Score = 58.2 bits (139), Expect(2) = 3e-09
 Identities = 30/41 (73%), Positives = 33/41 (80%)
 Frame = +3

Query: 3    FELLSNH*R*LRTNSLLANVFFRSNTISESYQYLSNIFLPN 125
            FELL N  R LRTNS L+N  FRSNT+SESYQYLSN+FL N
Sbjct: 2048 FELLINRQRWLRTNSSLSNGSFRSNTLSESYQYLSNLFLSN 2088



 Score = 27.7 bits (60), Expect(2) = 3e-09
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = +1

Query: 163  KKMTLSDNMKIIKFMYRHTNFPSLNWKDMW 252
            K+    D MKI  FM    +FP L+ KDMW
Sbjct: 2102 KRWLFPDEMKI-GFMQEEKDFPFLSRKDMW 2130


>ref|YP_004935596.1| ycf2 (chloroplast) [Eleutherococcus senticosus]
            gi|359422205|ref|YP_004935615.1| ycf2 (chloroplast)
            [Eleutherococcus senticosus] gi|347448251|gb|AEO92663.1|
            ycf2 (chloroplast) [Eleutherococcus senticosus]
            gi|347448268|gb|AEO92680.1| ycf2 (chloroplast)
            [Eleutherococcus senticosus]
          Length = 2121

 Score = 56.6 bits (135), Expect(2) = 9e-09
 Identities = 29/41 (70%), Positives = 32/41 (78%)
 Frame = +3

Query: 3    FELLSNH*R*LRTNSLLANVFFRSNTISESYQYLSNIFLPN 125
            FELL N  R  RTNS L+N  FRSNT+SESYQYLSN+FL N
Sbjct: 2038 FELLINRQRWFRTNSSLSNGSFRSNTLSESYQYLSNLFLSN 2078



 Score = 27.7 bits (60), Expect(2) = 9e-09
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = +1

Query: 163  KKMTLSDNMKIIKFMYRHTNFPSLNWKDMW 252
            K+    D MKI  FM +  +FP L+ KDMW
Sbjct: 2092 KRWLFPDEMKI-GFMEQEKDFPFLSRKDMW 2120


>ref|YP_087009.1| Ycf2 [Panax ginseng] gi|52220874|ref|YP_087028.1| Ycf2 [Panax
            ginseng] gi|68053092|sp|Q68RU4.1|YCF2_PANGI RecName:
            Full=Protein ycf2 gi|51235356|gb|AAT98552.1| ycf2 protein
            [Panax ginseng] gi|51235377|gb|AAT98573.1| ycf2 protein
            [Panax ginseng]
          Length = 2110

 Score = 56.6 bits (135), Expect(2) = 9e-09
 Identities = 29/41 (70%), Positives = 32/41 (78%)
 Frame = +3

Query: 3    FELLSNH*R*LRTNSLLANVFFRSNTISESYQYLSNIFLPN 125
            FELL N  R  RTNS L+N  FRSNT+SESYQYLSN+FL N
Sbjct: 2027 FELLINRQRWFRTNSSLSNGSFRSNTLSESYQYLSNLFLSN 2067



 Score = 27.7 bits (60), Expect(2) = 9e-09
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = +1

Query: 163  KKMTLSDNMKIIKFMYRHTNFPSLNWKDMW 252
            K+    D MKI  FM +  +FP L+ KDMW
Sbjct: 2081 KRWLFPDEMKI-GFMEQEKDFPFLSRKDMW 2109


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