BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00030187
         (265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...   101   3e-24
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]     100   5e-24
gb|ABG22119.1| polyprotein [Cynara cardunculus var. scolymus]          95   7e-24
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-...    97   9e-24
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]            96   9e-24

>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77548751|gb|ABA91548.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 2340

 Score =  101 bits (251), Expect(2) = 3e-24
 Identities = 43/56 (76%), Positives = 53/56 (94%)
 Frame = +1

Query: 88   GSIMYAMVCTRPDISQAVSVVSRYMANPGKEHWQAVKWILRYLKGTSNFCLEFGRT 255
            GS+MYAMVC+RPD+S A+SVVSRYMANPGKEHW+AV+WI RYL+GTS+ CL+FGR+
Sbjct: 1328 GSLMYAMVCSRPDLSHALSVVSRYMANPGKEHWKAVQWIFRYLRGTSSACLQFGRS 1383



 Score = 35.4 bits (80), Expect(2) = 3e-24
 Identities = 16/28 (57%), Positives = 21/28 (75%)
 Frame = +3

Query: 3    YFRLSAAQSPQSQKEEDYMTRVPYSSTV 86
            +FRLS+   PQS  + +YM+RVPYSS V
Sbjct: 1300 HFRLSSDLCPQSDYDIEYMSRVPYSSAV 1327


>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score =  100 bits (250), Expect(2) = 5e-24
 Identities = 43/57 (75%), Positives = 54/57 (94%)
 Frame = +1

Query: 91   SIMYAMVCTRPDISQAVSVVSRYMANPGKEHWQAVKWILRYLKGTSNFCLEFGRTSN 261
            S+MYAMVC+RPD+S A+SVVSRYMANPGKEHW+AV+WI RYL+GTS+ CL+FGR+S+
Sbjct: 1031 SLMYAMVCSRPDLSHALSVVSRYMANPGKEHWKAVQWIFRYLRGTSSACLQFGRSSD 1087



 Score = 35.0 bits (79), Expect(2) = 5e-24
 Identities = 16/28 (57%), Positives = 21/28 (75%)
 Frame = +3

Query: 3    YFRLSAAQSPQSQKEEDYMTRVPYSSTV 86
            +FRLS+   PQS  + +YM+RVPYSS V
Sbjct: 1002 HFRLSSDLCPQSAYDIEYMSRVPYSSAV 1029


>gb|ABG22119.1| polyprotein [Cynara cardunculus var. scolymus]
          Length = 358

 Score = 94.7 bits (234), Expect(2) = 7e-24
 Identities = 38/54 (70%), Positives = 50/54 (92%)
 Frame = +1

Query: 88  GSIMYAMVCTRPDISQAVSVVSRYMANPGKEHWQAVKWILRYLKGTSNFCLEFG 249
           GS+MYAM+CTRPD++ AVS+VSRYMANPG+EHW+AV+W+LRYL GT ++C+ FG
Sbjct: 194 GSLMYAMICTRPDLAYAVSMVSRYMANPGREHWKAVQWVLRYLSGTRDYCMCFG 247



 Score = 40.8 bits (94), Expect(2) = 7e-24
 Identities = 17/28 (60%), Positives = 23/28 (82%)
 Frame = +3

Query: 3   YFRLSAAQSPQSQKEEDYMTRVPYSSTV 86
           +F+LSA Q P S +E++YM+RVPYSS V
Sbjct: 166 HFKLSACQCPDSNEEKEYMSRVPYSSAV 193


>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77549942|gb|ABA92739.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 1373

 Score = 97.4 bits (241), Expect(2) = 9e-24
 Identities = 41/56 (73%), Positives = 52/56 (92%)
 Frame = +1

Query: 88   GSIMYAMVCTRPDISQAVSVVSRYMANPGKEHWQAVKWILRYLKGTSNFCLEFGRT 255
            GS+MYAMVC+RPD+S A+S+VSRYM+NPGKEHW+AV+WI RYL+GT+  CL+FGRT
Sbjct: 1122 GSLMYAMVCSRPDLSYAMSLVSRYMSNPGKEHWRAVQWIFRYLRGTTYSCLKFGRT 1177



 Score = 37.7 bits (86), Expect(2) = 9e-24
 Identities = 17/28 (60%), Positives = 21/28 (75%)
 Frame = +3

Query: 3    YFRLSAAQSPQSQKEEDYMTRVPYSSTV 86
            +F+LSAAQ P    E +YM+RVPYSS V
Sbjct: 1094 HFKLSAAQCPSIDAEIEYMSRVPYSSAV 1121


>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]
          Length = 1335

 Score = 96.3 bits (238), Expect(2) = 9e-24
 Identities = 40/56 (71%), Positives = 52/56 (92%)
 Frame = +1

Query: 88   GSIMYAMVCTRPDISQAVSVVSRYMANPGKEHWQAVKWILRYLKGTSNFCLEFGRT 255
            GS+MYAMVC+RPD+S A+S+VSRYM+NPGKEHW+A++WI RYL+GT+  CL+FGRT
Sbjct: 1124 GSLMYAMVCSRPDLSYAMSLVSRYMSNPGKEHWRALQWIFRYLRGTTYSCLKFGRT 1179



 Score = 38.9 bits (89), Expect(2) = 9e-24
 Identities = 17/28 (60%), Positives = 22/28 (78%)
 Frame = +3

Query: 3    YFRLSAAQSPQSQKEEDYMTRVPYSSTV 86
            +F+LSAAQ P +  E +YM+RVPYSS V
Sbjct: 1096 HFKLSAAQCPSTDAEIEYMSRVPYSSAV 1123