BLASTX nr result

ID: Cephaelis21_contig00029920 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00029920
         (530 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003560009.1| PREDICTED: zinc finger Ran-binding domain-co...   108   4e-22
ref|XP_002318592.1| chromatin remodeling complex subunit [Populu...   108   5e-22
dbj|BAC83216.1| putative DNA helicase [Oryza sativa Japonica Group]   108   6e-22
ref|NP_001060181.2| Os07g0598300 [Oryza sativa Japonica Group] g...   108   6e-22
gb|EEE67527.1| hypothetical protein OsJ_24993 [Oryza sativa Japo...   108   6e-22

>ref|XP_003560009.1| PREDICTED: zinc finger Ran-binding domain-containing protein 3-like
           [Brachypodium distachyon]
          Length = 1153

 Score =  108 bits (271), Expect = 4e-22
 Identities = 61/122 (50%), Positives = 79/122 (64%), Gaps = 8/122 (6%)
 Frame = -1

Query: 404 NLTAAQNVVFLELPKEISYLHQAESRAHRLGQTKAVNIYVFCAKGTSDESRWQKLNRSLF 225
           + ++AQNVVFLELP+  S L QAE RAHR GQT AVNIY+FCAK TSDES W  LN+SLF
Sbjct: 587 DFSSAQNVVFLELPRSSSELLQAEDRAHRRGQTNAVNIYIFCAKNTSDESHWLHLNQSLF 646

Query: 224 QVSSIMNGKHAAIPGIKIETISDLETSGGAAER-------NEEPVVKLGTNNEVSAD-MT 69
           +VSS+MNGK  AI  I+++ +  L       E+       N +P    G+   + +D M+
Sbjct: 647 RVSSVMNGKKDAIREIEVDQVYHLGEISNTKEKTQHESLENHDPGSNDGSKELLESDTMS 706

Query: 68  IN 63
           IN
Sbjct: 707 IN 708


>ref|XP_002318592.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222859265|gb|EEE96812.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 726

 Score =  108 bits (270), Expect = 5e-22
 Identities = 57/107 (53%), Positives = 73/107 (68%)
 Frame = -1

Query: 404 NLTAAQNVVFLELPKEISYLHQAESRAHRLGQTKAVNIYVFCAKGTSDESRWQKLNRSLF 225
           + ++AQNVVFLELP+  S + QAE RAHR GQ+ AVNIY+FCAK T DE+ WQ LN+SL 
Sbjct: 129 DFSSAQNVVFLELPQSPSLMLQAEDRAHRRGQSNAVNIYIFCAKDTMDETCWQNLNKSLH 188

Query: 224 QVSSIMNGKHAAIPGIKIETISDLETSGGAAERNEEPVVKLGTNNEV 84
           +VSSI +GK+ A+P I +E IS    S     R+ E  VKL  +  V
Sbjct: 189 RVSSITDGKYDAVPEILVERISYFGKSDKGIRRSSEVQVKLPDSGSV 235


>dbj|BAC83216.1| putative DNA helicase [Oryza sativa Japonica Group]
          Length = 1029

 Score =  108 bits (269), Expect = 6e-22
 Identities = 55/105 (52%), Positives = 74/105 (70%)
 Frame = -1

Query: 404 NLTAAQNVVFLELPKEISYLHQAESRAHRLGQTKAVNIYVFCAKGTSDESRWQKLNRSLF 225
           + ++AQNVVF+ELPK  S L QAE RAHR GQT AVNIY+FCA+ T DES W  LN+SLF
Sbjct: 462 DFSSAQNVVFVELPKSASELLQAEDRAHRRGQTNAVNIYIFCARNTLDESHWLHLNQSLF 521

Query: 224 QVSSIMNGKHAAIPGIKIETISDLETSGGAAERNEEPVVKLGTNN 90
           +VSS+MNGK  AI  I+++ +  LE S  +  +++   + L  +N
Sbjct: 522 RVSSLMNGKKDAIREIEVDQVYHLEESSKSEGKSQLGFLPLENHN 566


>ref|NP_001060181.2| Os07g0598300 [Oryza sativa Japonica Group]
           gi|255677946|dbj|BAF22095.2| Os07g0598300, partial
           [Oryza sativa Japonica Group]
          Length = 1158

 Score =  108 bits (269), Expect = 6e-22
 Identities = 55/105 (52%), Positives = 74/105 (70%)
 Frame = -1

Query: 404 NLTAAQNVVFLELPKEISYLHQAESRAHRLGQTKAVNIYVFCAKGTSDESRWQKLNRSLF 225
           + ++AQNVVF+ELPK  S L QAE RAHR GQT AVNIY+FCA+ T DES W  LN+SLF
Sbjct: 591 DFSSAQNVVFVELPKSASELLQAEDRAHRRGQTNAVNIYIFCARNTLDESHWLHLNQSLF 650

Query: 224 QVSSIMNGKHAAIPGIKIETISDLETSGGAAERNEEPVVKLGTNN 90
           +VSS+MNGK  AI  I+++ +  LE S  +  +++   + L  +N
Sbjct: 651 RVSSLMNGKKDAIREIEVDQVYHLEESSKSEGKSQLGFLPLENHN 695


>gb|EEE67527.1| hypothetical protein OsJ_24993 [Oryza sativa Japonica Group]
          Length = 1174

 Score =  108 bits (269), Expect = 6e-22
 Identities = 55/105 (52%), Positives = 74/105 (70%)
 Frame = -1

Query: 404 NLTAAQNVVFLELPKEISYLHQAESRAHRLGQTKAVNIYVFCAKGTSDESRWQKLNRSLF 225
           + ++AQNVVF+ELPK  S L QAE RAHR GQT AVNIY+FCA+ T DES W  LN+SLF
Sbjct: 627 DFSSAQNVVFVELPKSASELLQAEDRAHRRGQTNAVNIYIFCARNTLDESHWLHLNQSLF 686

Query: 224 QVSSIMNGKHAAIPGIKIETISDLETSGGAAERNEEPVVKLGTNN 90
           +VSS+MNGK  AI  I+++ +  LE S  +  +++   + L  +N
Sbjct: 687 RVSSLMNGKKDAIREIEVDQVYHLEESSKSEGKSQLGFLPLENHN 731


Top