BLASTX nr result
ID: Cephaelis21_contig00029877
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cephaelis21_contig00029877
(374 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containi... 135 3e-30
emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera] 135 3e-30
ref|XP_002306801.1| predicted protein [Populus trichocarpa] gi|2... 135 3e-30
ref|XP_003590567.1| Pentatricopeptide repeat-containing protein ... 135 5e-30
ref|XP_002876719.1| pentatricopeptide repeat-containing protein ... 132 3e-29
>ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Vitis vinifera]
Length = 993
Score = 135 bits (341), Expect = 3e-30
Identities = 65/124 (52%), Positives = 90/124 (72%)
Frame = -1
Query: 374 GMDCNMLLGNSLMDMYAKCRRTDYMHFIFNRMPYKDYVSWTTIISGYAHNNIPMEALHLF 195
G+D ++ +GNSL+DMYAK YM IF++MP KD VSWTTII+G+A N AL LF
Sbjct: 449 GLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELF 508
Query: 194 RIMKGEYMEVDFLMIGSLLLACGNLKCDSLVKQIHGFVTRRGLYDLVMDNTLIDVYGECQ 15
R ++ E +++D +MI S+LLAC LK S VK+IH ++ R+GL DLV+ N ++DVYGEC
Sbjct: 509 REVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLSDLVLQNGIVDVYGECG 568
Query: 14 NINY 3
N++Y
Sbjct: 569 NVDY 572
Score = 90.1 bits (222), Expect = 2e-16
Identities = 44/116 (37%), Positives = 72/116 (62%), Gaps = 1/116 (0%)
Frame = -1
Query: 362 NMLLGNSLMDMYAKCRRTDYMHFIFNRMPYKDYVSWTTIISGYAHNNIPMEALHLFRIMK 183
+++L N ++D+Y +C DY +F + +KD VSWT++IS Y HN + EAL LF +MK
Sbjct: 553 DLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMK 612
Query: 182 GEYMEVDFLMIGSLLLACGNLKCDSLVKQIHGFVTRRG-LYDLVMDNTLIDVYGEC 18
+E D + + S+L A +L K+IHGF+ R+G + + + +TL+D+Y C
Sbjct: 613 ETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARC 668
Score = 65.5 bits (158), Expect = 4e-09
Identities = 34/120 (28%), Positives = 61/120 (50%), Gaps = 1/120 (0%)
Frame = -1
Query: 362 NMLLGNSLMDMYAKCRRTDYMHFIFNRMPYKDYVSWTTIISGYAHNNIPMEALHLFRIMK 183
++ L L+ MY KC +F+ MP+K +W +I Y N P+ +L L+R M+
Sbjct: 149 SVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMR 208
Query: 182 GEYMEVDFLMIGSLLLACGNLKCDSLVKQIHGFVTRRGLYDLV-MDNTLIDVYGECQNIN 6
+ +D +L ACG LK ++HG + G +V + N+++ +Y +C ++N
Sbjct: 209 VSGIPLDACTFPCILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLN 268
Score = 59.3 bits (142), Expect = 3e-07
Identities = 44/130 (33%), Positives = 66/130 (50%), Gaps = 11/130 (8%)
Frame = -1
Query: 359 MLLGNSLMDMYAKCRRTDYMHFIFNRMPYK-DYVSWTTIISGYAHNNIPMEALHLFRIMK 183
+ + NS++ MY KC + +F+RMP K D VSW ++IS Y+ N +EAL LF M+
Sbjct: 251 VFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQ 310
Query: 182 GEYMEVDFLMIGSLLLACGNLKCDSLVKQ---IHGFVTRRGLY-DLVMDNTLIDVY---- 27
+ + + L AC + S +KQ IH V + Y ++ + N LI +Y
Sbjct: 311 KASLAPNTYTFVAALQACED---SSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFG 367
Query: 26 --GECQNINY 3
GE NI Y
Sbjct: 368 KMGEAANIFY 377
Score = 59.3 bits (142), Expect = 3e-07
Identities = 34/121 (28%), Positives = 62/121 (51%), Gaps = 1/121 (0%)
Frame = -1
Query: 362 NMLLGNSLMDMYAKCRRTDYMHFIFNRMPYKDYVSWTTIISGYAHNNIPMEALHLFRIMK 183
N+ + N+L+ MYA+ + IF M D +SW +++SG+ N + EAL + M+
Sbjct: 352 NVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMR 411
Query: 182 GEYMEVDFLMIGSLLLACGNLKCDSLVKQIHGFVTRRGL-YDLVMDNTLIDVYGECQNIN 6
+ D + + S++ A QIH + + GL DL + N+L+D+Y + ++
Sbjct: 412 DAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMK 471
Query: 5 Y 3
Y
Sbjct: 472 Y 472
>emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
Length = 957
Score = 135 bits (341), Expect = 3e-30
Identities = 65/124 (52%), Positives = 90/124 (72%)
Frame = -1
Query: 374 GMDCNMLLGNSLMDMYAKCRRTDYMHFIFNRMPYKDYVSWTTIISGYAHNNIPMEALHLF 195
G+D ++ +GNSL+DMYAK YM IF++MP KD VSWTTII+G+A N AL LF
Sbjct: 413 GLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELF 472
Query: 194 RIMKGEYMEVDFLMIGSLLLACGNLKCDSLVKQIHGFVTRRGLYDLVMDNTLIDVYGECQ 15
R ++ E +++D +MI S+LLAC LK S VK+IH ++ R+GL DLV+ N ++DVYGEC
Sbjct: 473 REVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLSDLVLQNGIVDVYGECG 532
Query: 14 NINY 3
N++Y
Sbjct: 533 NVDY 536
Score = 90.1 bits (222), Expect = 2e-16
Identities = 44/116 (37%), Positives = 72/116 (62%), Gaps = 1/116 (0%)
Frame = -1
Query: 362 NMLLGNSLMDMYAKCRRTDYMHFIFNRMPYKDYVSWTTIISGYAHNNIPMEALHLFRIMK 183
+++L N ++D+Y +C DY +F + +KD VSWT++IS Y HN + EAL LF +MK
Sbjct: 517 DLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMK 576
Query: 182 GEYMEVDFLMIGSLLLACGNLKCDSLVKQIHGFVTRRG-LYDLVMDNTLIDVYGEC 18
+E D + + S+L A +L K+IHGF+ R+G + + + +TL+D+Y C
Sbjct: 577 ETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARC 632
Score = 65.5 bits (158), Expect = 4e-09
Identities = 34/120 (28%), Positives = 61/120 (50%), Gaps = 1/120 (0%)
Frame = -1
Query: 362 NMLLGNSLMDMYAKCRRTDYMHFIFNRMPYKDYVSWTTIISGYAHNNIPMEALHLFRIMK 183
++ L L+ MY KC +F+ MP+K +W +I Y N P+ +L L+R M+
Sbjct: 113 SVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMR 172
Query: 182 GEYMEVDFLMIGSLLLACGNLKCDSLVKQIHGFVTRRGLYDLV-MDNTLIDVYGECQNIN 6
+ +D +L ACG LK ++HG + G +V + N+++ +Y +C ++N
Sbjct: 173 VSGIPLDACTFPCILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLN 232
Score = 59.3 bits (142), Expect = 3e-07
Identities = 44/130 (33%), Positives = 66/130 (50%), Gaps = 11/130 (8%)
Frame = -1
Query: 359 MLLGNSLMDMYAKCRRTDYMHFIFNRMPYK-DYVSWTTIISGYAHNNIPMEALHLFRIMK 183
+ + NS++ MY KC + +F+RMP K D VSW ++IS Y+ N +EAL LF M+
Sbjct: 215 VFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQ 274
Query: 182 GEYMEVDFLMIGSLLLACGNLKCDSLVKQ---IHGFVTRRGLY-DLVMDNTLIDVY---- 27
+ + + L AC + S +KQ IH V + Y ++ + N LI +Y
Sbjct: 275 KASLAPNTYTFVAALQACED---SSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFG 331
Query: 26 --GECQNINY 3
GE NI Y
Sbjct: 332 KMGEAANIFY 341
Score = 59.3 bits (142), Expect = 3e-07
Identities = 34/121 (28%), Positives = 62/121 (51%), Gaps = 1/121 (0%)
Frame = -1
Query: 362 NMLLGNSLMDMYAKCRRTDYMHFIFNRMPYKDYVSWTTIISGYAHNNIPMEALHLFRIMK 183
N+ + N+L+ MYA+ + IF M D +SW +++SG+ N + EAL + M+
Sbjct: 316 NVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMR 375
Query: 182 GEYMEVDFLMIGSLLLACGNLKCDSLVKQIHGFVTRRGL-YDLVMDNTLIDVYGECQNIN 6
+ D + + S++ A QIH + + GL DL + N+L+D+Y + ++
Sbjct: 376 DAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMK 435
Query: 5 Y 3
Y
Sbjct: 436 Y 436
>ref|XP_002306801.1| predicted protein [Populus trichocarpa] gi|222856250|gb|EEE93797.1|
predicted protein [Populus trichocarpa]
Length = 787
Score = 135 bits (340), Expect = 3e-30
Identities = 62/123 (50%), Positives = 87/123 (70%)
Frame = -1
Query: 371 MDCNMLLGNSLMDMYAKCRRTDYMHFIFNRMPYKDYVSWTTIISGYAHNNIPMEALHLFR 192
+D N+ +GN+L+DMY+KC Y +F++M KD +SWTT+I+ YA NN EAL L R
Sbjct: 244 LDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLLR 303
Query: 191 IMKGEYMEVDFLMIGSLLLACGNLKCDSLVKQIHGFVTRRGLYDLVMDNTLIDVYGECQN 12
++ + M+VD +MIGS LLAC L+C S K++HG+ +RGL DL+M N +IDVY +C N
Sbjct: 304 KVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGLSDLMMQNMIIDVYADCGN 363
Query: 11 INY 3
INY
Sbjct: 364 INY 366
Score = 82.8 bits (203), Expect = 3e-14
Identities = 42/119 (35%), Positives = 73/119 (61%), Gaps = 1/119 (0%)
Frame = -1
Query: 362 NMLLGNSLMDMYAKCRRTDYMHFIFNRMPYKDYVSWTTIISGYAHNNIPMEALHLFRIMK 183
++++ N ++D+YA C +Y +F + KD VSWT++IS Y HN + EAL +F +MK
Sbjct: 347 DLMMQNMIIDVYADCGNINYATRMFESIKCKDVVSWTSMISCYVHNGLANEALGVFYLMK 406
Query: 182 GEYMEVDFLMIGSLLLACGNLKCDSLVKQIHGFVTRRG-LYDLVMDNTLIDVYGECQNI 9
+E D + + S+L A +L + K+IHGF+ R+G + + N+L+D+Y C ++
Sbjct: 407 ETSVEPDSITLVSILSAAASLSALNKGKEIHGFIFRKGFMLEGSTVNSLVDMYACCGSL 465
Score = 62.0 bits (149), Expect = 5e-08
Identities = 35/121 (28%), Positives = 67/121 (55%), Gaps = 1/121 (0%)
Frame = -1
Query: 362 NMLLGNSLMDMYAKCRRTDYMHFIFNRMPYKDYVSWTTIISGYAHNNIPMEALHLFRIMK 183
++ + N+L+ M+ + + Y IF+ + KD ++W ++I+G+ N + EAL F ++
Sbjct: 146 DVYVANALVAMHVRFGKMSYAARIFDELDEKDNITWNSMIAGFTQNGLYNEALQFFCGLQ 205
Query: 182 GEYMEVDFLMIGSLLLACGNLKCDSLVKQIHGFVTRRGL-YDLVMDNTLIDVYGECQNIN 6
++ D + + S+L A G L K+IH + + L +L + NTLID+Y +C +
Sbjct: 206 DANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNWLDSNLRIGNTLIDMYSKCCCVA 265
Query: 5 Y 3
Y
Sbjct: 266 Y 266
Score = 59.7 bits (143), Expect = 2e-07
Identities = 40/126 (31%), Positives = 65/126 (51%), Gaps = 2/126 (1%)
Frame = -1
Query: 374 GMDCNMLLGNSLMDMYAKCRRTDYMHFIFNRMPYK-DYVSWTTIISGYAHNNIPMEALHL 198
G D + + NSL+ MYAKC +F+RM + D VSW +IIS Y+ N MEAL L
Sbjct: 40 GYDSIVFVANSLVSMYAKCNDILGARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGL 99
Query: 197 FRIMKGEYMEVDFLMIGSLLLACGNLKCDSLVKQIHGFVTRRG-LYDLVMDNTLIDVYGE 21
FR M+ + + + + L AC + L +IH + + + D+ + N L+ ++
Sbjct: 100 FREMQKAGVGANTYTLVAALQACEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVR 159
Query: 20 CQNINY 3
++Y
Sbjct: 160 FGKMSY 165
>ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479615|gb|AES60818.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 1212
Score = 135 bits (339), Expect = 5e-30
Identities = 63/124 (50%), Positives = 89/124 (71%)
Frame = -1
Query: 374 GMDCNMLLGNSLMDMYAKCRRTDYMHFIFNRMPYKDYVSWTTIISGYAHNNIPMEALHLF 195
G+D NM +GNSL+DMY KC YM F MP KD +SWTTII+GYA N ++AL+L
Sbjct: 382 GIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLL 441
Query: 194 RIMKGEYMEVDFLMIGSLLLACGNLKCDSLVKQIHGFVTRRGLYDLVMDNTLIDVYGECQ 15
R ++ E M+VD +MIGS+LLAC LK + L+K+IHG+V + GL D+++ N +++VYGE
Sbjct: 442 RKVQLEKMDVDPMMIGSILLACSGLKSEKLIKEIHGYVLKGGLADILIQNAIVNVYGELA 501
Query: 14 NINY 3
++Y
Sbjct: 502 LVDY 505
Score = 77.4 bits (189), Expect = 1e-12
Identities = 38/116 (32%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Frame = -1
Query: 362 NMLLGNSLMDMYAKCRRTDYMHFIFNRMPYKDYVSWTTIISGYAHNNIPMEALHLFRIMK 183
++L+ N+++++Y + DY +F + KD VSWT++I+ HN + +EAL LF +
Sbjct: 486 DILIQNAIVNVYGELALVDYARHVFESINSKDIVSWTSMITCCVHNGLAIEALELFNSLI 545
Query: 182 GEYMEVDFLMIGSLLLACGNLKCDSLVKQIHGFVTRRGLY-DLVMDNTLIDVYGEC 18
+E D + + S+L A L K+IHGF+ R+G + + ++ N+L+D+Y C
Sbjct: 546 ETNIEPDLITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIANSLVDMYARC 601
Score = 67.0 bits (162), Expect = 2e-09
Identities = 33/121 (27%), Positives = 69/121 (57%), Gaps = 1/121 (0%)
Frame = -1
Query: 362 NMLLGNSLMDMYAKCRRTDYMHFIFNRMPYKDYVSWTTIISGYAHNNIPMEALHLFRIMK 183
++ + N+L+ MYA C + + +F M +KD VSW T++SG N++ +A++ F+ M+
Sbjct: 285 DVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQ 344
Query: 182 GEYMEVDFLMIGSLLLACGNLKCDSLVKQIHGFVTRRGL-YDLVMDNTLIDVYGECQNIN 6
+ D + + +++ A G ++H + + G+ ++ + N+LID+YG+C +
Sbjct: 345 DSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVK 404
Query: 5 Y 3
Y
Sbjct: 405 Y 405
>ref|XP_002876719.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297322557|gb|EFH52978.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 1005
Score = 132 bits (332), Expect = 3e-29
Identities = 64/124 (51%), Positives = 88/124 (70%)
Frame = -1
Query: 374 GMDCNMLLGNSLMDMYAKCRRTDYMHFIFNRMPYKDYVSWTTIISGYAHNNIPMEALHLF 195
G D N+L+GN+L+DMY+KC T YM F M KD +SWTTII+GYA N+ +EAL LF
Sbjct: 395 GWDSNLLVGNTLIDMYSKCNLTCYMGRAFLMMHEKDLISWTTIIAGYALNDCHVEALQLF 454
Query: 194 RIMKGEYMEVDFLMIGSLLLACGNLKCDSLVKQIHGFVTRRGLYDLVMDNTLIDVYGECQ 15
R + + ME+D +M+GS+L AC LK +VK+IH + R+GL D V+ N L+DVYG+C+
Sbjct: 455 RDVAKKRMEIDEMMLGSILRACSVLKSMLIVKEIHCHILRKGLIDTVIQNELVDVYGKCR 514
Query: 14 NINY 3
N+ Y
Sbjct: 515 NMGY 518
Score = 65.5 bits (158), Expect = 4e-09
Identities = 37/117 (31%), Positives = 63/117 (53%), Gaps = 1/117 (0%)
Frame = -1
Query: 356 LLGNSLMDMYAKCRRTDYMHFIFNRMPYKDYVSWTTIISGYAHNNIPMEALHLFRIMKGE 177
++ N L+D+Y KCR Y +F + KD VSWT++IS A N EA+ LFR M
Sbjct: 501 VIQNELVDVYGKCRNMGYASRVFESIKGKDVVSWTSMISSSALNGNENEAVELFRRMAET 560
Query: 176 YMEVDFLMIGSLLLACGNLKCDSLVKQIHGFVTRRGL-YDLVMDNTLIDVYGECQNI 9
+ D + + +L A +L ++IHG++ R+G + + ++D+Y C ++
Sbjct: 561 GLLADSVALLCILSAAASLSALKKGREIHGYLLRKGFCLEGSIAVAVVDMYACCGDL 617
Score = 59.3 bits (142), Expect = 3e-07
Identities = 36/111 (32%), Positives = 58/111 (52%), Gaps = 1/111 (0%)
Frame = -1
Query: 347 NSLMDMYAKCRRTDYMHFIFNRMPYKDYVSWTTIISGYAHNNIPMEALHLFRIMKGEYME 168
N+L+ MYA+C + I M D V+W ++I GY N + EAL F M +
Sbjct: 303 NALIAMYARCGKMLEAGRILRLMNNADVVTWNSLIKGYVQNLMYKEALQFFCDMIAAGHK 362
Query: 167 VDFLMIGSLLLACGNLKCDSLVKQIHGFVTRRGL-YDLVMDNTLIDVYGEC 18
D + + S++ A G L ++H +V + G +L++ NTLID+Y +C
Sbjct: 363 PDEVSLTSVIAASGRLSNLLAGMELHAYVIKHGWDSNLLVGNTLIDMYSKC 413