BLASTX nr result
ID: Cephaelis21_contig00029872
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cephaelis21_contig00029872
(1871 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABA98491.1| retrotransposon protein, putative, unclassified [... 245 3e-62
gb|AAC67331.1| putative non-LTR retroelement reverse transcripta... 243 1e-61
gb|AAD20714.1| putative non-LTR retroelement reverse transcripta... 243 1e-61
gb|AAD24831.1| putative non-LTR retroelement reverse transcripta... 242 2e-61
gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptas... 242 3e-61
>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1621
Score = 245 bits (626), Expect = 3e-62
Identities = 163/498 (32%), Positives = 241/498 (48%), Gaps = 11/498 (2%)
Frame = +2
Query: 377 TAPWIVDGDFNAIAQLHEHSGRIAPDLLSITDFSTAITDAGLLEFPTTGASFT*TGVRPS 556
T PW++ GDFN I HE G ++ +F A+TD GL + G +FT S
Sbjct: 375 TTPWLMAGDFNEILFSHEKQGGRMKAQSAMDEFRHALTDCGLDDLGFEGDAFTWRNHSHS 434
Query: 557 --GRVWRHLDRVMVNHS*TSQTWISSVHVLARTTSDHSPFFLRIEVAMDSVP-----RPF 715
G + LDR + N + + V SDH P + +E V F
Sbjct: 435 QEGYIRERLDRAVANPEWRAMFPAARVINGDPRHSDHRPVIIELEGKNKGVRGRNGHNDF 494
Query: 716 RFQSFWVTKPDFLTVVQDNWALPVTFYGPYRFAWKLKRLKGALRN*NKEVVGNIFEHLQR 895
RF++ W+ + F VV++ W + G A L + L + + V+G++ + +++
Sbjct: 495 RFEAAWLEEEKFKEVVKEAWDVSAGLQGLPVHA-SLAGVAAGLSSWSSNVLGDLEKRVKK 553
Query: 896 SESALHACEAQFDATGTPGDLVALNESQARYLKALADE-ESYWKQRARVKWLNEGDLNT- 1069
+ L C Q D V E L+ L + + YWKQRA WLN+GD NT
Sbjct: 554 VKKELETCRRQ----PISRDQVVREEVLRYRLEKLEQQVDIYWKQRAHTNWLNKGDRNTS 609
Query: 1070 VFHASTLGRRSRLYISRVKNDDGIWLDQQQDIRDQAVHFF*SLLIVEGLPPPDATVQYFL 1249
FHAS RR R I++++ +DG W+++++D R + FF L G Q L
Sbjct: 610 FFHASCSERRRRNRINKLRREDGSWVEREEDKRAMIIEFFKQLFTSNG----GQNSQKLL 665
Query: 1250 QHIPPTVSATKNACLLPPVTREEVRAAVFRLDSDSSPGVDGFPGYFYRICWDIIADNLLQ 1429
+ VS N L TREEV+ A+ + +PG DG P FY+ CWD++ + +
Sbjct: 666 DVVDRKVSGAMNESLRAEFTREEVKEALDAIGDLKAPGPDGMPAGFYKACWDVVGEKVTD 725
Query: 1430 AVNEFFSGVPLPRVISSTQIILLPKKLNPNTFANFRPISLCTFLNKLFTRIVCDRLSYIL 1609
V E G +P + I+L+PK P + RPISLC KL ++++ +RL IL
Sbjct: 726 EVLEVLRGGAIPEGWNDITIVLIPKVKKPELIKDLRPISLCNVCYKLVSKVLANRLKKIL 785
Query: 1610 PSLISEEQSTFLKGREISNNILLAQEVTQQLNR*VRGH--NMILKLDMMKVFDRVSWSFL 1783
P +IS QS F+ GR IS+NIL+A E+T + G KLDM K +DRV WSFL
Sbjct: 786 PDVISPAQSAFVPGRLISDNILIADEMTHYMRNKRSGQVGYAAFKLDMSKAYDRVEWSFL 845
Query: 1784 EALLLHFGFSPSFVALLM 1837
++L GF +V L+M
Sbjct: 846 HDMILKLGFHTDWVNLIM 863
>gb|AAC67331.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1449
Score = 243 bits (621), Expect = 1e-61
Identities = 168/539 (31%), Positives = 270/539 (50%), Gaps = 16/539 (2%)
Frame = +2
Query: 299 IYAKCTRLERLGLWDSLVQ-LSRTTGATAPWIVDGDFNAIAQLHEHSG-RIAPDLLS-IT 469
+YA ER LW+ L + PWI+ GDFN I + EHS P + S +
Sbjct: 522 VYASNFAEERKILWNDLRDHMDSPIIRDKPWIIFGDFNEILDMDEHSRMEDHPAVTSGMR 581
Query: 470 DFSTAITDAGLLEFPTTGASFT*TGVRPSGRVWRHLDRVMVNHS*TSQTWISSVHVL-AR 646
DF + + + + G FT R + +W+ LDRVMVN + + S +V A
Sbjct: 582 DFQSLVNYCSFSDLASHGPLFTWCNKRDNDPIWKKLDRVMVNEA-WKMVYPQSYNVFEAG 640
Query: 647 TTSDHSPFFLRIEVAMDSVP-----RPFRFQSFWVTKPDFLTVVQDNWA----LPVTFYG 799
SDH RI + M+S +PF+F + +F +V++ W + ++
Sbjct: 641 GCSDH--LRCRINLNMNSGAQVRGNKPFKFVNAVADMEEFKPLVENFWRETEPIHMSTSS 698
Query: 800 PYRFAWKLKRLKGALRN*NKEVVGNIFEHLQRSESALHACEAQFDATGTPGDLVALNESQ 979
+RF KLK LK LR KE +GN+ + + E+ L C+AQ + P ES+
Sbjct: 699 LFRFTKKLKALKPKLRGLAKEKMGNLVKRTR--EAYLSLCQAQQSNSQNPSQRAMEIESE 756
Query: 980 A--RYLKALADEESYWKQRARVKWLNEGDLNT-VFHASTLGRRSRLYISRVKNDDGIWLD 1150
A R+ + + EE Y KQ +++ WL GD N FH + R ++ I ++ +DG
Sbjct: 757 AYVRWDRIASIEEKYLKQVSKLHWLKVGDKNNKTFHRAATARAAQNSIREIQKEDGSTAT 816
Query: 1151 QQQDIRDQAVHFF*SLLIVEGLPPPDATVQYFLQHIPPTVSATKNACLLPPVTREEVRAA 1330
+ DI+++ FF L + TV+ +P S + L V+ +E+R A
Sbjct: 817 TKDDIKNETERFFQEFLQLIPNDYEGITVEKLTSLLPYHCSPAEKDMLTASVSAKEIRGA 876
Query: 1331 VFRLDSDSSPGVDGFPGYFYRICWDIIADNLLQAVNEFFSGVPLPRVISSTQIILLPKKL 1510
+F + +D SPG DG+ FY+ WDII + AV FF LP+ +++T + L+PKKL
Sbjct: 877 LFSMPNDKSPGPDGYTSEFYKRAWDIIGAEFVLAVKSFFEKGFLPKGVNTTILALIPKKL 936
Query: 1511 NPNTFANFRPISLCTFLNKLFTRIVCDRLSYILPSLISEEQSTFLKGREISNNILLAQEV 1690
++RPIS C + K+ ++I+ +RL ++LP+ I+ QS F+K R + N+LLA E+
Sbjct: 937 EAKEMKDYRPISCCNVIYKVISKIIANRLKHVLPNFIAGNQSAFVKDRLLIENLLLATEL 996
Query: 1691 TQQLNR*VRGHNMILKLDMMKVFDRVSWSFLEALLLHFGFSPSFVALLMGNLRSSHFSI 1867
+ ++ +K+D+ K FD V WSFL+ +L F P FV +M + ++ FS+
Sbjct: 997 VKDYHKDTISGRCAIKIDISKAFDSVQWSFLKNVLSALDFPPEFVHWVMLCVTTASFSV 1055
>gb|AAD20714.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1750
Score = 243 bits (621), Expect = 1e-61
Identities = 172/584 (29%), Positives = 284/584 (48%), Gaps = 15/584 (2%)
Frame = +2
Query: 164 LLHPPND*CSILEHSWDWNIYASL----EKLIHVEVHGSYSQFLCNLTAIYAKCTRLERL 331
+ PPN L W N+ SL E+LI + H +++ L+ +Y T+ ER
Sbjct: 438 ITQPPNGRSGGLALMWKNNVSLSLISQDERLI--DSHVTFNNKSFYLSCVYGHPTQSERH 495
Query: 332 GLWDSLVQLSRTTGATAPWIVDGDFNAIAQLHEHSGRIAPDLLSITDFSTAITDAGLLEF 511
LW +L +S A W++ GDFN I E G + + +F ++ + +
Sbjct: 496 QLWQTLEHIS--DNRNAEWLLVGDFNEILSNAEKIGGPMREEWTFRNFRNMVSHCDIEDM 553
Query: 512 PTTGASFT*TGVRPSGRVWRHLDRVMVNHS*TSQTWISSVHVLARTTSDHSPFFLRIEVA 691
+ G F+ G R + V LDRV +N + T+ + + L T SDH P + +
Sbjct: 554 RSKGDRFSWVGERHTHTVKCCLDRVFINSAWTATFPYAEIEFLDFTGSDHKPVLVHFNES 613
Query: 692 MDSVPRPFRFQSFWVTKPDFLTVVQDNW-------ALPVTF-YGPYRFAWKLKRLKGALR 847
+ FRF + + P F +VQ +W + P+T R A + RLK A
Sbjct: 614 FPRRSKLFRFDNRLIDIPTFKRIVQTSWRTNRNSRSTPITERISSCRQA--MARLKHASN 671
Query: 848 N*NKEVVGNIFEHLQRSESALHACEAQFDATGTPGDLVALNESQARYLKALADEESYWKQ 1027
+++ + + L R+ + + Q + L ES A KA +DEE YWKQ
Sbjct: 672 LNSEQRIKKLQSSLNRAMESTRRVDRQL--------IPQLQESLA---KAFSDEEIYWKQ 720
Query: 1028 RARVKWLNEGDLNT-VFHASTLGRRSRLYISRVKNDDGIWLDQQQDIRDQAVHFF*SLLI 1204
++R +W+ EGD NT FHA T R S+ ++ + +D G ++I + A FF ++
Sbjct: 721 KSRNQWMKEGDQNTGYFHACTKTRYSQNRVNTIMDDQGRMFTGDKEIGNHAQDFFTNIFS 780
Query: 1205 VEGLPPPDATVQYFLQHIPPTVSATKNACLLPPVTREEVRAAVFRLDSDSSPGVDGFPGY 1384
G+ F TV+ T N L + E+ A+ ++ D +PG DG
Sbjct: 781 TNGIKVSPIDFADFKS----TVTNTVNLDLTKEFSDTEIYDAICQIGDDKAPGPDGLTAR 836
Query: 1385 FYRICWDIIADNLLQAVNEFFSGVPLPRVISSTQIILLPKKLNPNTFANFRPISLCTFLN 1564
FY+ CWDI+ +++ V +FF + I+ T I ++PK NP T +++RPI+LC L
Sbjct: 837 FYKNCWDIVGYDVILEVKKFFETSFMKPSINHTNICMIPKITNPTTLSDYRPIALCNVLY 896
Query: 1565 KLFTRIVCDRLSYILPSLISEEQSTFLKGREISNNILLAQEVTQQL--NR*VRGHNMILK 1738
K+ ++ + +RL L S++S+ Q+ F+ GR I++N+++A EV L + V M +K
Sbjct: 897 KVISKCLVNRLKSHLNSIVSDSQAAFIPGRIINDNVMIAHEVMHSLKVRKRVSKTYMAVK 956
Query: 1739 LDMMKVFDRVSWSFLEALLLHFGFSPSFVALLMGNLRSSHFSIL 1870
D+ K +DRV W FLE + FGF ++ +M ++S H+S+L
Sbjct: 957 TDVSKAYDRVEWDFLETTMRLFGFCNKWIGWIMAAVKSVHYSVL 1000
>gb|AAD24831.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1524
Score = 242 bits (618), Expect = 2e-61
Identities = 172/584 (29%), Positives = 283/584 (48%), Gaps = 15/584 (2%)
Frame = +2
Query: 164 LLHPPND*CSILEHSWDWNIYASL----EKLIHVEVHGSYSQFLCNLTAIYAKCTRLERL 331
+ PPN L W N+ SL E+LI + H +++ L+ +Y T+ ER
Sbjct: 212 ITQPPNGRSGGLALMWKNNVSLSLISQDERLI--DSHVTFNNKSFYLSCVYGHPTQSERH 269
Query: 332 GLWDSLVQLSRTTGATAPWIVDGDFNAIAQLHEHSGRIAPDLLSITDFSTAITDAGLLEF 511
LW +L +S A W++ GDFN I E G + + +F ++ + +
Sbjct: 270 QLWQTLEHIS--DNRNAEWLLVGDFNEILSNAEKIGGPMREEWTFRNFRNMVSHCDIEDM 327
Query: 512 PTTGASFT*TGVRPSGRVWRHLDRVMVNHS*TSQTWISSVHVLARTTSDHSPFFLRIEVA 691
+ G F+ G R + V LDRV +N + T+ + L T SDH P + +
Sbjct: 328 RSKGDRFSWVGERHTHTVKCCLDRVFINSAWTATFPYAETEFLDFTGSDHKPVLVHFNES 387
Query: 692 MDSVPRPFRFQSFWVTKPDFLTVVQDNW-------ALPVTF-YGPYRFAWKLKRLKGALR 847
+ FRF + + P F +VQ +W + P+T R A + RLK A
Sbjct: 388 FPRRSKLFRFDNRLIDIPTFKRIVQTSWRTNRNSRSTPITERISSCRQA--MARLKHASN 445
Query: 848 N*NKEVVGNIFEHLQRSESALHACEAQFDATGTPGDLVALNESQARYLKALADEESYWKQ 1027
+++ + + L R+ + + Q + L ES A KA +DEE YWKQ
Sbjct: 446 LNSEQRIKKLQSSLNRAMESTRRVDRQL--------IPQLQESLA---KAFSDEEIYWKQ 494
Query: 1028 RARVKWLNEGDLNT-VFHASTLGRRSRLYISRVKNDDGIWLDQQQDIRDQAVHFF*SLLI 1204
++R +W+ EGD NT FHA T R S+ ++ + +D G ++I + A FF ++
Sbjct: 495 KSRNQWMKEGDQNTGYFHACTKTRYSQNRVNTIMDDQGRMFTGDKEIGNHAQDFFTNIFS 554
Query: 1205 VEGLPPPDATVQYFLQHIPPTVSATKNACLLPPVTREEVRAAVFRLDSDSSPGVDGFPGY 1384
G+ F TV+ T N L + E+ A+ ++ D +PG DG
Sbjct: 555 TNGIKVSPIDFADFKS----TVTNTVNLDLTKEFSDTEIYDAICQIGDDKAPGPDGLTAR 610
Query: 1385 FYRICWDIIADNLLQAVNEFFSGVPLPRVISSTQIILLPKKLNPNTFANFRPISLCTFLN 1564
FY+ CWDI+ +++ V +FF + I+ T I ++PK NP T +++RPI+LC L
Sbjct: 611 FYKNCWDIVGYDVILEVKKFFETSFMKPSINHTNICMIPKITNPTTLSDYRPIALCNVLY 670
Query: 1565 KLFTRIVCDRLSYILPSLISEEQSTFLKGREISNNILLAQEVTQQL--NR*VRGHNMILK 1738
K+ ++ + +RL L S++S+ Q+ F+ GR I++N+++A EV L + V M +K
Sbjct: 671 KVISKCLVNRLKSHLNSIVSDSQAAFIPGRIINDNVMIAHEVMHSLKVRKRVSKTYMAVK 730
Query: 1739 LDMMKVFDRVSWSFLEALLLHFGFSPSFVALLMGNLRSSHFSIL 1870
D+ K +DRV W FLE + FGF ++ +M ++S H+S+L
Sbjct: 731 TDVSKAYDRVEWDFLETTMRLFGFCNKWIGWIMAAVKSVHYSVL 774
>gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
[Medicago truncatula]
Length = 1296
Score = 242 bits (617), Expect = 3e-61
Identities = 172/530 (32%), Positives = 265/530 (50%), Gaps = 4/530 (0%)
Frame = +2
Query: 293 TAIYAKCTRLERLGLWDSLVQLSRTTGATAPWIVDGDFNAIAQLHEHSGRIAPDLLSITD 472
T IYA R LW+ LV ++ T T PW++ GDFN E G + T
Sbjct: 103 TCIYASPNYSMRPNLWNYLVNINDTI--TGPWMLIGDFNETHLPSEQRGGTFHHNRAAT- 159
Query: 473 FSTAITDAGLLEFPTTGASFT*TGVRPSGRVW-RHLDRVMVNHS*TSQTWISSVHVLART 649
FS + + LL+ TTG FT R+ + LDR M N + V VL R
Sbjct: 160 FSNFMNNCNLLDLTTTGGRFTWHKNNNGIRILSKKLDRGMANVDWRLSFPEAFVEVLCRL 219
Query: 650 TSDHSPFFLRIE-VAMDSVPRPFRFQSFWVTKPDFLTVVQDNWALPVTFYGPYRFAWKLK 826
SDH+P LR + + PRPFRF++ W+ D+ VV+ +W+ + P A +K
Sbjct: 220 HSDHNPLLLRFGGLPLTRGPRPFRFEAAWIDHYDYGNVVKRSWSTHT--HNPT--ASLIK 275
Query: 827 RLKGALRN*NKEVVGNIFEHLQRSESALHACEAQFDATGTPGDLVALNESQARYLKALAD 1006
++ ++ N +V GNIF+ R E L ++ + + + E Q Y L
Sbjct: 276 VMENSIIF-NHDVFGNIFQRKSRVEWRLKGVQSYLERVDSYRHTLLEKELQDEYNHILFQ 334
Query: 1007 EESYWKQRARVKWLNEGDLNTVF-HASTLGRRSRLYISRVKNDDGIWLDQQQDIRDQAVH 1183
EE W Q++R +W+ GD NT F HA T+ RR I +++ +GI ++++A+
Sbjct: 335 EEMLWYQKSREQWVKLGDKNTAFFHAQTVIRRKWNKIHKLQLPNGISTSDSNILQEEALK 394
Query: 1184 FF*SLLIVEGLPPPDATVQYFLQHIPPTVSATKNACLLPPVTREEVRAAVFRLDSDSSPG 1363
+F +P ++F + P + T L P+T++EV AA+ + +PG
Sbjct: 395 YFKKFFCGSQIPYS----RFFNEGRHPALDDTGKTSLTSPITKKEVFAALNSMKPYKAPG 450
Query: 1364 VDGFPGYFYRICWDIIADNLLQAVNEFFSGVPLPRVISSTQIILLPKKLNPNTFANFRPI 1543
DGF F++ W I+ D++ V F IS+T I L+PK +PNT+ +FRPI
Sbjct: 451 PDGFHCIFFKQYWHIVGDDVFHLVRSAFLTGHFDPAISNTLIALIPKIDSPNTYKDFRPI 510
Query: 1544 SLCTFLNKLFTRIVCDRLSYILPSLISEEQSTFLKGREISNNILLAQEVTQQLNR*VRGH 1723
SLC L K+ T+++ RL L +LI QS+FL GR ++N ++ QE+ + R R
Sbjct: 511 SLCNTLYKIITKVLVHRLRPFLNNLIGPYQSSFLPGRGTADNSIILQEILHFMKRSKRKK 570
Query: 1724 NMI-LKLDMMKVFDRVSWSFLEALLLHFGFSPSFVALLMGNLRSSHFSIL 1870
+ KLD+ K FD V+W FL + LL FGF V L+M + S+++S+L
Sbjct: 571 GYVAFKLDLEKAFDNVNWDFLNSCLLDFGFPDIIVKLIMHCVSSANYSLL 620