BLASTX nr result

ID: Cephaelis21_contig00029739 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00029739
         (203 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002334088.1| predicted protein [Populus trichocarpa] gi|2...    85   5e-15
ref|XP_002334494.1| predicted protein [Populus trichocarpa] gi|2...    82   5e-14
ref|XP_002336066.1| predicted protein [Populus trichocarpa] gi|2...    79   5e-13
ref|XP_002304031.1| predicted protein [Populus trichocarpa] gi|2...    79   5e-13
gb|ABG37663.1| CCHC-type integrase [Populus trichocarpa]               79   5e-13

>ref|XP_002334088.1| predicted protein [Populus trichocarpa] gi|222839594|gb|EEE77931.1|
           predicted protein [Populus trichocarpa]
          Length = 799

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 34/63 (53%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
 Frame = -2

Query: 196 GSGACGFNNICRLQ-EGRPACDCPKGYNLVDPNDKYGSCKPNFIPTCDEVEKGSAADQFD 20
           GSG CGFN++CRL  +GRP C+CP GY+L+DP+D+YGSC+PN+  +C+E E     D +D
Sbjct: 300 GSGTCGFNSVCRLNSDGRPICECPGGYSLLDPSDQYGSCRPNYTQSCEEDEVAPVEDLYD 359

Query: 19  MLE 11
             E
Sbjct: 360 FEE 362


>ref|XP_002334494.1| predicted protein [Populus trichocarpa] gi|222872794|gb|EEF09925.1|
           predicted protein [Populus trichocarpa]
          Length = 801

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 33/63 (52%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
 Frame = -2

Query: 196 GSGACGFNNICRLQ-EGRPACDCPKGYNLVDPNDKYGSCKPNFIPTCDEVEKGSAADQFD 20
           GSG CGFN++CRL  + RP C+CP GY+L+DP+D+YGSC+PN+  +C+E E     D +D
Sbjct: 300 GSGTCGFNSVCRLNSDRRPICECPGGYSLLDPSDQYGSCRPNYTQSCEEDEVAPVEDLYD 359

Query: 19  MLE 11
             E
Sbjct: 360 FEE 362


>ref|XP_002336066.1| predicted protein [Populus trichocarpa] gi|222869874|gb|EEF07005.1|
           predicted protein [Populus trichocarpa]
          Length = 691

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 34/68 (50%), Positives = 49/68 (72%), Gaps = 1/68 (1%)
 Frame = -2

Query: 202 DKGSGACGFNNICRLQ-EGRPACDCPKGYNLVDPNDKYGSCKPNFIPTCDEVEKGSAADQ 26
           D GSGACG+N+IC L+ + RP C CP+G++L+D NDKYGSC P+F  +C +    S  DQ
Sbjct: 240 DLGSGACGYNSICNLKADKRPECKCPQGFSLLDQNDKYGSCIPDFELSCRDDGLNSTEDQ 299

Query: 25  FDMLEEVD 2
           +D +E ++
Sbjct: 300 YDFVELIN 307


>ref|XP_002304031.1| predicted protein [Populus trichocarpa] gi|222841463|gb|EEE79010.1|
           predicted protein [Populus trichocarpa]
          Length = 699

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 34/68 (50%), Positives = 49/68 (72%), Gaps = 1/68 (1%)
 Frame = -2

Query: 202 DKGSGACGFNNICRLQ-EGRPACDCPKGYNLVDPNDKYGSCKPNFIPTCDEVEKGSAADQ 26
           D GSGACG+N+IC L+ + RP C CP+G++L+D NDKYGSC P+F  +C +    S  DQ
Sbjct: 257 DLGSGACGYNSICNLKADKRPECKCPQGFSLLDQNDKYGSCIPDFELSCRDDGLNSTEDQ 316

Query: 25  FDMLEEVD 2
           +D +E ++
Sbjct: 317 YDFVELIN 324


>gb|ABG37663.1| CCHC-type integrase [Populus trichocarpa]
          Length = 2037

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 34/68 (50%), Positives = 49/68 (72%), Gaps = 1/68 (1%)
 Frame = -2

Query: 202 DKGSGACGFNNICRLQ-EGRPACDCPKGYNLVDPNDKYGSCKPNFIPTCDEVEKGSAADQ 26
           D GSGACG+N+IC L+ + RP C CP+G++L+D NDKYGSC P+F  +C +    S  DQ
Sbjct: 335 DLGSGACGYNSICNLKADKRPECKCPQGFSLLDQNDKYGSCIPDFELSCRDDGLNSTEDQ 394

Query: 25  FDMLEEVD 2
           +D +E ++
Sbjct: 395 YDFVELIN 402


Top