BLASTX nr result

ID: Cephaelis21_contig00029677 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00029677
         (544 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001233788.1| DNA repair protein RAD51 homolog [Solanum ly...   261   5e-68
dbj|BAF02935.1| RAD51 homolog [Populus nigra]                         261   6e-68
ref|XP_004144057.1| PREDICTED: DNA repair protein RAD51 homolog ...   254   5e-66
ref|XP_002516197.1| DNA repair protein rad51, putative [Ricinus ...   253   1e-65
ref|XP_002273803.1| PREDICTED: DNA repair protein RAD51 homolog ...   251   4e-65

>ref|NP_001233788.1| DNA repair protein RAD51 homolog [Solanum lycopersicum]
           gi|2500107|sp|Q40134.1|RAD51_SOLLC RecName: Full=DNA
           repair protein RAD51 homolog gi|1143810|gb|AAC23700.1|
           LeRAD51 [Solanum lycopersicum]
          Length = 342

 Score =  261 bits (667), Expect = 5e-68
 Identities = 131/147 (89%), Positives = 141/147 (95%), Gaps = 1/147 (0%)
 Frame = -1

Query: 439 MEQQ-RKQKMVQEQHDDLEDIQHGPFPVEQLQASGIAALDIKKLKDAGLCTVESVAYSPR 263
           MEQQ R QK +Q+Q+D++ED+QHGPFPVEQLQASGIAALD+KKLKDAGLCTVESV Y+PR
Sbjct: 1   MEQQHRNQKSMQDQNDEIEDVQHGPFPVEQLQASGIAALDVKKLKDAGLCTVESVVYAPR 60

Query: 262 KELLQIKGISEAKVDKIIEAASKLVPLGFTSASQLHAQRLEIIQIATGSRELDKILEGGI 83
           KELLQIKGISEAKVDKIIEAASKLVPLGFTSASQLHAQRLEIIQI +GS+ELDKILEGGI
Sbjct: 61  KELLQIKGISEAKVDKIIEAASKLVPLGFTSASQLHAQRLEIIQITSGSKELDKILEGGI 120

Query: 82  ETGSITEIYGEFRSGKTQLCHTLCVTC 2
           ETGSITEIYGEFR GKTQLCHTLCVTC
Sbjct: 121 ETGSITEIYGEFRCGKTQLCHTLCVTC 147


>dbj|BAF02935.1| RAD51 homolog [Populus nigra]
          Length = 342

 Score =  261 bits (666), Expect = 6e-68
 Identities = 131/147 (89%), Positives = 141/147 (95%), Gaps = 1/147 (0%)
 Frame = -1

Query: 439 MEQQRKQKMV-QEQHDDLEDIQHGPFPVEQLQASGIAALDIKKLKDAGLCTVESVAYSPR 263
           MEQQR QK V Q+QH+D E++QHGPFPVEQLQASGIA+LD+KKLKDAGLCTVESVA+SPR
Sbjct: 1   MEQQRNQKAVNQQQHEDHEEVQHGPFPVEQLQASGIASLDVKKLKDAGLCTVESVAFSPR 60

Query: 262 KELLQIKGISEAKVDKIIEAASKLVPLGFTSASQLHAQRLEIIQIATGSRELDKILEGGI 83
           KELLQIKGISEAKVDKIIEAASKLVPLGFTSASQLHAQR EIIQI +GSRELDKILEGG+
Sbjct: 61  KELLQIKGISEAKVDKIIEAASKLVPLGFTSASQLHAQRQEIIQITSGSRELDKILEGGV 120

Query: 82  ETGSITEIYGEFRSGKTQLCHTLCVTC 2
           ETGSITE+YGEFRSGKTQLCHTLCVTC
Sbjct: 121 ETGSITEMYGEFRSGKTQLCHTLCVTC 147


>ref|XP_004144057.1| PREDICTED: DNA repair protein RAD51 homolog [Cucumis sativus]
           gi|449518135|ref|XP_004166099.1| PREDICTED: DNA repair
           protein RAD51 homolog [Cucumis sativus]
          Length = 340

 Score =  254 bits (650), Expect = 5e-66
 Identities = 128/146 (87%), Positives = 139/146 (95%)
 Frame = -1

Query: 439 MEQQRKQKMVQEQHDDLEDIQHGPFPVEQLQASGIAALDIKKLKDAGLCTVESVAYSPRK 260
           ME+QR QK  +EQ ++ ++IQHGPFPVEQLQASGIAA+D+KKLKDAGLCTVESVAYSPRK
Sbjct: 1   MERQRNQKPSEEQ-EEADEIQHGPFPVEQLQASGIAAMDVKKLKDAGLCTVESVAYSPRK 59

Query: 259 ELLQIKGISEAKVDKIIEAASKLVPLGFTSASQLHAQRLEIIQIATGSRELDKILEGGIE 80
           ELLQIKGISEAKVDKIIEAASK+VPLGFTSA QLHAQRLEIIQ+ +GSRELDKILEGGIE
Sbjct: 60  ELLQIKGISEAKVDKIIEAASKIVPLGFTSAGQLHAQRLEIIQLTSGSRELDKILEGGIE 119

Query: 79  TGSITEIYGEFRSGKTQLCHTLCVTC 2
           TGSITEIYGEFRSGKTQLCHTLCVTC
Sbjct: 120 TGSITEIYGEFRSGKTQLCHTLCVTC 145


>ref|XP_002516197.1| DNA repair protein rad51, putative [Ricinus communis]
           gi|223544683|gb|EEF46199.1| DNA repair protein rad51,
           putative [Ricinus communis]
          Length = 294

 Score =  253 bits (646), Expect = 1e-65
 Identities = 129/148 (87%), Positives = 140/148 (94%)
 Frame = -1

Query: 445 MAMEQQRKQKMVQEQHDDLEDIQHGPFPVEQLQASGIAALDIKKLKDAGLCTVESVAYSP 266
           MA +QQR+Q+  ++   +L+++QHGPFPVEQLQ SGIAALD+KKLKDAGLCTVESVAYSP
Sbjct: 1   MAHQQQRQQQ--KQPQAELDEMQHGPFPVEQLQESGIAALDVKKLKDAGLCTVESVAYSP 58

Query: 265 RKELLQIKGISEAKVDKIIEAASKLVPLGFTSASQLHAQRLEIIQIATGSRELDKILEGG 86
           RKELLQIKGISEAKVDKIIEAASKLVPLGFTSASQLHAQRLEIIQI +GSRELDKILEGG
Sbjct: 59  RKELLQIKGISEAKVDKIIEAASKLVPLGFTSASQLHAQRLEIIQITSGSRELDKILEGG 118

Query: 85  IETGSITEIYGEFRSGKTQLCHTLCVTC 2
           IETGSITEIYGEFRSGKTQLCHTLCVTC
Sbjct: 119 IETGSITEIYGEFRSGKTQLCHTLCVTC 146


>ref|XP_002273803.1| PREDICTED: DNA repair protein RAD51 homolog [Vitis vinifera]
           gi|297738498|emb|CBI27743.3| unnamed protein product
           [Vitis vinifera]
          Length = 337

 Score =  251 bits (642), Expect = 4e-65
 Identities = 126/141 (89%), Positives = 136/141 (96%)
 Frame = -1

Query: 424 KQKMVQEQHDDLEDIQHGPFPVEQLQASGIAALDIKKLKDAGLCTVESVAYSPRKELLQI 245
           +QKM Q  H+++ED+QHGPFPVE LQASGIA+LDIKKLKDAGLCTVESVAYSPRK+LLQI
Sbjct: 3   QQKMAQA-HEEVEDMQHGPFPVEHLQASGIASLDIKKLKDAGLCTVESVAYSPRKDLLQI 61

Query: 244 KGISEAKVDKIIEAASKLVPLGFTSASQLHAQRLEIIQIATGSRELDKILEGGIETGSIT 65
           KGISEAKVDKI+EAASKLVPLGFTSASQLHAQRLEIIQI +GSRELDKILEGG+ETGSIT
Sbjct: 62  KGISEAKVDKIVEAASKLVPLGFTSASQLHAQRLEIIQITSGSRELDKILEGGLETGSIT 121

Query: 64  EIYGEFRSGKTQLCHTLCVTC 2
           EIYGEFRSGKTQLCHTLCVTC
Sbjct: 122 EIYGEFRSGKTQLCHTLCVTC 142


Top