BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00029527
         (353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga...    89   9e-27
gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptas...    78   8e-21
ref|XP_002535257.1| conserved hypothetical protein [Ricinus comm...    73   1e-20
emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulga...    77   2e-20
emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis ...    78   7e-20

>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1378

 Score = 88.6 bits (218), Expect(2) = 9e-27
 Identities = 39/71 (54%), Positives = 52/71 (73%)
 Frame = +1

Query: 4   GINNTQIVLIPKCKEPEKLNQFRPISLCTVPYKVVTRVIVNRLRKVIPKLVAPNQVSFIP 183
           G N+T IVLIPK   P+    FRPI LC + YK+VT+VI+NRL+ ++P L++P Q SF+P
Sbjct: 490 GFNDTFIVLIPKMDIPQLAKHFRPIGLCNIVYKIVTKVIINRLKPILPSLISPTQCSFVP 549

Query: 184 GRNITDNIIKV 216
            R ITDN+I V
Sbjct: 550 NRQITDNVIIV 560



 Score = 56.6 bits (135), Expect(2) = 9e-27
 Identities = 22/43 (51%), Positives = 35/43 (81%)
 Frame = +3

Query: 225 EKAFDCLSWTFIRDTLEDAGIPGNIVNIVLECITSATMQVMWN 353
           EKA+D L WTFIR++L +  IP ++V+IV+ C++SA +Q++WN
Sbjct: 584 EKAYDRLRWTFIRESLMELRIPQHLVDIVMNCVSSANLQILWN 626


>gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
           [Medicago truncatula]
          Length = 1296

 Score = 77.8 bits (190), Expect(2) = 8e-21
 Identities = 36/70 (51%), Positives = 45/70 (64%)
 Frame = +1

Query: 1   PGINNTQIVLIPKCKEPEKLNQFRPISLCTVPYKVVTRVIVNRLRKVIPKLVAPNQVSFI 180
           P I+NT I LIPK   P     FRPISLC   YK++T+V+V+RLR  +  L+ P Q SF+
Sbjct: 485 PAISNTLIALIPKIDSPNTYKDFRPISLCNTLYKIITKVLVHRLRPFLNNLIGPYQSSFL 544

Query: 181 PGRNITDNII 210
           PGR   DN I
Sbjct: 545 PGRGTADNSI 554



 Score = 47.4 bits (111), Expect(2) = 8e-21
 Identities = 18/43 (41%), Positives = 28/43 (65%)
 Frame = +3

Query: 225 EKAFDCLSWTFIRDTLEDAGIPGNIVNIVLECITSATMQVMWN 353
           EKAFD ++W F+   L D G P  IV +++ C++SA   ++WN
Sbjct: 580 EKAFDNVNWDFLNSCLLDFGFPDIIVKLIMHCVSSANYSLLWN 622


>ref|XP_002535257.1| conserved hypothetical protein [Ricinus communis]
           gi|223523624|gb|EEF27127.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 220

 Score = 72.8 bits (177), Expect(2) = 1e-20
 Identities = 35/70 (50%), Positives = 47/70 (67%)
 Frame = +1

Query: 7   INNTQIVLIPKCKEPEKLNQFRPISLCTVPYKVVTRVIVNRLRKVIPKLVAPNQVSFIPG 186
           IN T   LIPK   PE  N FRPI LC V YK++T+VI N L+ ++ K+++P Q S + G
Sbjct: 87  INCTNTFLIPKMDAPESSNHFRPIILCNVTYKLITKVIANHLKIIMSKVISPMQSSIVKG 146

Query: 187 RNITDNIIKV 216
           R+I +NII V
Sbjct: 147 RHIMNNIIIV 156



 Score = 51.6 bits (122), Expect(2) = 1e-20
 Identities = 21/40 (52%), Positives = 31/40 (77%)
 Frame = +3

Query: 225 EKAFDCLSWTFIRDTLEDAGIPGNIVNIVLECITSATMQV 344
           EKA+D L+W+FI DTL D  IP  ++N+++  ITSA+MQ+
Sbjct: 180 EKAYDKLNWSFILDTLMDRSIPSGLINVIMNYITSASMQI 219


>emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1363

 Score = 76.6 bits (187), Expect(2) = 2e-20
 Identities = 32/69 (46%), Positives = 50/69 (72%)
 Frame = +1

Query: 4   GINNTQIVLIPKCKEPEKLNQFRPISLCTVPYKVVTRVIVNRLRKVIPKLVAPNQVSFIP 183
           G++++ + LIPK + P     FRPI LC   YK++T+VI NR++ ++ +L+ P+Q SF+P
Sbjct: 488 GLSDSFLALIPKIESPVCCKDFRPIGLCNTVYKMITKVIANRIKPILGELIHPSQTSFVP 547

Query: 184 GRNITDNII 210
           GRNI +NII
Sbjct: 548 GRNIQENII 556



 Score = 47.0 bits (110), Expect(2) = 2e-20
 Identities = 16/42 (38%), Positives = 30/42 (71%)
 Frame = +3

Query: 228 KAFDCLSWTFIRDTLEDAGIPGNIVNIVLECITSATMQVMWN 353
           KA+D L W FIR+TL+    P +++ ++++CI+S  + ++WN
Sbjct: 583 KAYDSLEWGFIRETLQGFNFPQSLIALIMDCISSPAISLIWN 624


>emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis thaliana]
           gi|7268307|emb|CAB78601.1| reverse transcriptase like
           protein [Arabidopsis thaliana]
          Length = 929

 Score = 77.8 bits (190), Expect(2) = 7e-20
 Identities = 35/69 (50%), Positives = 51/69 (73%)
 Frame = +1

Query: 10  NNTQIVLIPKCKEPEKLNQFRPISLCTVPYKVVTRVIVNRLRKVIPKLVAPNQVSFIPGR 189
           N+  +VL+ K  +PE++ QFRP+SLC V +K++T+++V RL+ VI KL+ P Q SFIPGR
Sbjct: 301 NDVLLVLLAKVAKPERITQFRPVSLCNVLFKIITKMMVIRLKNVISKLIGPAQASFIPGR 360

Query: 190 NITDNIIKV 216
              DNI+ V
Sbjct: 361 LSFDNIVVV 369



 Score = 44.3 bits (103), Expect(2) = 7e-20
 Identities = 16/43 (37%), Positives = 27/43 (62%)
 Frame = +3

Query: 225 EKAFDCLSWTFIRDTLEDAGIPGNIVNIVLECITSATMQVMWN 353
           EKA+D + W F+ +TLE AG+    +  ++EC+    M ++WN
Sbjct: 393 EKAYDRIRWDFLAETLEAAGLSEGWIKRIMECVAGPEMSLLWN 435