BLASTX nr result

ID: Cephaelis21_contig00029397 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00029397
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002454801.1| hypothetical protein SORBIDRAFT_04g037700 [S...    65   4e-09
gb|AAX95132.1| hypothetical protein [Oryza sativa Japonica Group...    60   1e-07
pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi...    60   2e-07
gb|AEJ07916.1| putative ZmL1 non-LTR retrotransposon protein [Ze...    59   3e-07
gb|ABN08723.1| Polynucleotidyl transferase, Ribonuclease H fold ...    58   9e-07

>ref|XP_002454801.1| hypothetical protein SORBIDRAFT_04g037700 [Sorghum bicolor]
           gi|241934632|gb|EES07777.1| hypothetical protein
           SORBIDRAFT_04g037700 [Sorghum bicolor]
          Length = 322

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 33/91 (36%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
 Frame = -2

Query: 277 DKLVWKHTHRGKFTVDSAY--QNLSKLRQVNCQKLESSTCKGKTRSMWNRLWGMKVKGKV 104
           D + W    +G+F+V SAY  Q   KLR+  C     +         WNRLW ++   KV
Sbjct: 3   DVVGWHFDAKGQFSVKSAYKVQRNCKLREQRCLTRAGTGSSDGGGDFWNRLWKLECPPKV 62

Query: 103 KHFLRRAYHNILPTSVLLEAKGIREDEICKI 11
           KHFL R  HN LP   +L  +G++ D +C +
Sbjct: 63  KHFLWRMSHNTLPVKRMLSRRGVKTDTLCNM 93


>gb|AAX95132.1| hypothetical protein [Oryza sativa Japonica Group]
           gi|62734252|gb|AAX96361.1| hypothetical protein
           LOC_Os11g08530 [Oryza sativa Japonica Group]
           gi|77549038|gb|ABA91835.1| expressed protein [Oryza
           sativa Japonica Group]
          Length = 371

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 34/95 (35%), Positives = 45/95 (47%), Gaps = 6/95 (6%)
 Frame = -2

Query: 277 DKLVWKHTHRGKFTVDSAYQNLS------KLRQVNCQKLESSTCKGKTRSMWNRLWGMKV 116
           D   W    RG+F+V SAY  L        LRQV      SS   G  +  W R+W +  
Sbjct: 48  DTAAWHFDPRGRFSVKSAYHTLEDQRERLSLRQVG---ESSSVSSGVAKLEWGRIWSLHY 104

Query: 115 KGKVKHFLRRAYHNILPTSVLLEAKGIREDEICKI 11
             KVKHFL R  HN LP  + ++ +G+  D  C +
Sbjct: 105 PPKVKHFLWRLAHNSLPLRLNIDRRGLEVDTRCPV 139


>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
            (fragment)
          Length = 1365

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 27/87 (31%), Positives = 48/87 (55%)
 Frame = -2

Query: 277  DKLVWKHTHRGKFTVDSAYQNLSKLRQVNCQKLESSTCKGKTRSMWNRLWGMKVKGKVKH 98
            D   W H+H G ++V + Y+ LSK  QV+ +  + +  K    S+++++W +    K++ 
Sbjct: 999  DSFCWLHSHNGLYSVKTGYEFLSK--QVHHRLYQEAKVKPSVNSLFDKIWNLHTAPKIRI 1056

Query: 97   FLRRAYHNILPTSVLLEAKGIREDEIC 17
            FL +A H  +P    L  +GIR D+ C
Sbjct: 1057 FLWKALHGAIPVEDRLRTRGIRSDDGC 1083


>gb|AEJ07916.1| putative ZmL1 non-LTR retrotransposon protein [Zea mays]
          Length = 472

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 29/87 (33%), Positives = 45/87 (51%)
 Frame = -2

Query: 277 DKLVWKHTHRGKFTVDSAYQNLSKLRQVNCQKLESSTCKGKTRSMWNRLWGMKVKGKVKH 98
           D L W    +G F+V SAY   S+ R  +     SS+  G+  ++W  +W + V  K+K 
Sbjct: 106 DTLAWHGDPKGNFSVKSAYALASRRRDHHNNADASSSISGRGENVWKSIWNVNVTNKIKM 165

Query: 97  FLRRAYHNILPTSVLLEAKGIREDEIC 17
           FL R  HN  P  V +  +GI+ + +C
Sbjct: 166 FLWRLAHNSHPVRVNIARRGIKIETLC 192


>gb|ABN08723.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 355

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 31/90 (34%), Positives = 44/90 (48%)
 Frame = -2

Query: 277 DKLVWKHTHRGKFTVDSAYQNLSKLRQVNCQKLESSTCKGKTRSMWNRLWGMKVKGKVKH 98
           D  +WK T  G +TV SAY+         C  L          S W  +W + +  +V+ 
Sbjct: 78  DTRIWKTTTTGNYTVKSAYRI--------CSDLLHPHDSAHNNSSWMNIWNLNIPHRVRA 129

Query: 97  FLRRAYHNILPTSVLLEAKGIREDEICKIY 8
           FL R  HN LPT V L A+GI+ +E C ++
Sbjct: 130 FLWRLAHNCLPTRVNLNARGIQCEESCVMF 159


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