BLASTX nr result

ID: Cephaelis21_contig00029131 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00029131
         (1202 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN72260.1| hypothetical protein VITISV_035448 [Vitis vinifera]   424   e-116
ref|XP_002268516.1| PREDICTED: pentatricopeptide repeat-containi...   422   e-115
ref|XP_002533784.1| pentatricopeptide repeat-containing protein,...   414   e-113
emb|CBI31083.3| unnamed protein product [Vitis vinifera]              413   e-113
ref|XP_004172319.1| PREDICTED: pentatricopeptide repeat-containi...   400   e-109

>emb|CAN72260.1| hypothetical protein VITISV_035448 [Vitis vinifera]
          Length = 1032

 Score =  424 bits (1090), Expect = e-116
 Identities = 213/363 (58%), Positives = 262/363 (72%), Gaps = 16/363 (4%)
 Frame = -3

Query: 1200 VMLACEKYNLVHEFFRKVQKTFIPNALNYKVLLNTLWREGKIDEAILAVEDMERRGIVGT 1021
            VM  C KYNLVHEFF KVQK+ IPNAL YKVL+NTLWREGK DEA+LAV+DME+RG+VG+
Sbjct: 669  VMFVCGKYNLVHEFFWKVQKSSIPNALTYKVLVNTLWREGKTDEAVLAVQDMEKRGVVGS 728

Query: 1020 ASVYYDLARCLCSAGKCKEALLQIDKLCRVANKPLVVTYTGLIQACIDSGNIENAAFMFN 841
            A++YYDLARCLC AG+C+EAL+QI+K+C+VANKPLVVTYTGLIQAC+DSGNI+NAAF+FN
Sbjct: 729  AALYYDLARCLCXAGRCQEALMQIEKICKVANKPLVVTYTGLIQACLDSGNIQNAAFIFN 788

Query: 840  HMQNFCSPNLVTYNIMLKAFLDNGKFEEANELFLTILG-----------NRKVMPDRYTF 694
             M  FCSPNL+T N+MLKA+L++  FEEA ELF  +LG           N +V+PD YTF
Sbjct: 789  QMHEFCSPNLITCNVMLKAYLEHRMFEEAKELFGKMLGDGNRISSKSDYNDRVLPDIYTF 848

Query: 693  NVMLDACSAERKWEDLEFAYVNMLKYGHHFNAQRHLKIVLDACTAGKEEILETTWKHLAR 514
            N M+DAC AE++W DLE+ Y  ML++G HFNA+RHL+I+LDA  AGKEE+LETTWK LA 
Sbjct: 849  NTMIDACBAEKRWHDLEYVYERMLRHGFHFNAKRHLRIILDASRAGKEELLETTWKXLAG 908

Query: 513  GDRVPPFPLIDAMFRLKLEEGDLTEAISCFACHPSIE-SRAFSTKRWLNFLMENSRRFEK 337
              RVPP PLI   F +KLE+GD   A+S    H   E    FS + WLN   EN+ RF+ 
Sbjct: 909  EGRVPP-PLIKERFCMKLEKGDCAAAVSSITGHXMKELQEPFSKRAWLNLFTENAGRFQT 967

Query: 336  HILVKLIHAADSLVTRTDAQKLILQNFRLACEEFLSKRMKFGD----SDSLETATTTPSQ 169
              LV+L+H A  L+ R D    +LQN   +C+EFL   M        S   ETAT   S+
Sbjct: 968  ESLVELMHEASVLIARADMPNPVLQNLLASCKEFLRTHMTVSSVSSXSSRTETATAIQSE 1027

Query: 168  TAL 160
             AL
Sbjct: 1028 VAL 1030


>ref|XP_002268516.1| PREDICTED: pentatricopeptide repeat-containing protein At1g30610,
            chloroplastic-like [Vitis vinifera]
          Length = 846

 Score =  422 bits (1084), Expect = e-115
 Identities = 212/363 (58%), Positives = 262/363 (72%), Gaps = 16/363 (4%)
 Frame = -3

Query: 1200 VMLACEKYNLVHEFFRKVQKTFIPNALNYKVLLNTLWREGKIDEAILAVEDMERRGIVGT 1021
            VM  C KYNLVHEFF KVQK+ IPNAL YKVL+NTLWREGK DEA+LAV+DME+RG+VG+
Sbjct: 483  VMFVCGKYNLVHEFFWKVQKSSIPNALTYKVLVNTLWREGKTDEAVLAVQDMEKRGVVGS 542

Query: 1020 ASVYYDLARCLCSAGKCKEALLQIDKLCRVANKPLVVTYTGLIQACIDSGNIENAAFMFN 841
            A++YYDLARCLCSAG+C+EAL+QI+K+C+VANKPLVVTYTGLIQ C+DSGNI+NAAF+FN
Sbjct: 543  AALYYDLARCLCSAGRCQEALMQIEKICKVANKPLVVTYTGLIQVCLDSGNIQNAAFIFN 602

Query: 840  HMQNFCSPNLVTYNIMLKAFLDNGKFEEANELFLTILG-----------NRKVMPDRYTF 694
             M  FCSPNL+T N+MLKA+L++  FEEA  LF  +LG           N +V+PD YTF
Sbjct: 603  QMHEFCSPNLITCNVMLKAYLEHRMFEEAKGLFGKMLGDGNHISSKSDYNDRVLPDIYTF 662

Query: 693  NVMLDACSAERKWEDLEFAYVNMLKYGHHFNAQRHLKIVLDACTAGKEEILETTWKHLAR 514
            N M+DAC+AE++W DLE+ Y  ML++G HFNA+RHL+I+LDA  AGKEE+LETTWK LA 
Sbjct: 663  NTMIDACNAEKRWHDLEYVYERMLRHGFHFNAKRHLRIILDASRAGKEELLETTWKSLAG 722

Query: 513  GDRVPPFPLIDAMFRLKLEEGDLTEAISCFACHPSIE-SRAFSTKRWLNFLMENSRRFEK 337
              RVPP PLI   F +KLE+GD   A+S    H   E    FS + WLN   EN+ RF+ 
Sbjct: 723  EGRVPP-PLIKERFCMKLEKGDCAAAVSSITGHHMNELQEPFSKRAWLNLFTENAGRFQT 781

Query: 336  HILVKLIHAADSLVTRTDAQKLILQNFRLACEEFLSKRMKF----GDSDSLETATTTPSQ 169
              LV+L+H A   + R D    +LQN   +C+EFL   M       DS   ETAT   S+
Sbjct: 782  ESLVELMHEASVRIARADMPNPVLQNLLASCKEFLRTHMTVSSVSSDSSRTETATAIQSE 841

Query: 168  TAL 160
             AL
Sbjct: 842  VAL 844


>ref|XP_002533784.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223526285|gb|EEF28597.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 856

 Score =  414 bits (1064), Expect = e-113
 Identities = 207/358 (57%), Positives = 257/358 (71%), Gaps = 11/358 (3%)
 Frame = -3

Query: 1200 VMLACEKYNLVHEFFRKVQKTFIPNALNYKVLLNTLWREGKIDEAILAVEDMERRGIVGT 1021
            VM AC KYNLVHEFFRKVQK+ IPNAL YKVL+NTLWREGK DEA+LAVE+MERRGIVG 
Sbjct: 500  VMFACGKYNLVHEFFRKVQKSSIPNALVYKVLVNTLWREGKTDEAVLAVEEMERRGIVGF 559

Query: 1020 ASVYYDLARCLCSAGKCKEALLQIDKLCRVANKPLVVTYTGLIQACIDSGNIENAAFMFN 841
            A++YYDLARCLCSAG+C+EALLQI+K+CRVANKPLVVTYTGLIQAC+DSGNI NA ++FN
Sbjct: 560  AALYYDLARCLCSAGRCQEALLQIEKICRVANKPLVVTYTGLIQACLDSGNIHNAVYIFN 619

Query: 840  HMQNFCSPNLVTYNIMLKAFLDNGKFEEANELFLT-------ILGNR----KVMPDRYTF 694
             M++FCSPNLVT+N+MLKA+ ++G FE+A ELF         I GN     +V+PD YTF
Sbjct: 620  QMKHFCSPNLVTFNVMLKAYFEHGLFEDAKELFHKMTEDSNHIRGNHDYKVRVIPDIYTF 679

Query: 693  NVMLDACSAERKWEDLEFAYVNMLKYGHHFNAQRHLKIVLDACTAGKEEILETTWKHLAR 514
            N MLDAC +E+ W+D E+ Y  ML +G HFN +RHL+++LDA  AGK E LE TWKHLAR
Sbjct: 680  NTMLDACISEKSWDDFEYVYRRMLHHGFHFNGKRHLRMILDASRAGKVEPLEMTWKHLAR 739

Query: 513  GDRVPPFPLIDAMFRLKLEEGDLTEAISCFACHPSIESRAFSTKRWLNFLMENSRRFEKH 334
             DR+PP  LI   FR+ LE+ D   A++C   +P  ES AF    WLN   EN+ +  + 
Sbjct: 740  ADRIPPPNLIKERFRIMLEKDDCKSALACITTNPMGESPAFHKVAWLNLFKENAEQIRRD 799

Query: 333  ILVKLIHAADSLVTRTDAQKLILQNFRLACEEFLSKRMKFGDSDSLETATTTPSQTAL 160
             L++L H    LV   D    +LQN   +C +FL+ ++   +S   E   T  SQT L
Sbjct: 800  TLIQLKHEVSMLVNPPDP---VLQNLLASCNDFLNSQVIVSESSLPEIVCTAESQTNL 854


>emb|CBI31083.3| unnamed protein product [Vitis vinifera]
          Length = 647

 Score =  413 bits (1062), Expect = e-113
 Identities = 203/339 (59%), Positives = 252/339 (74%), Gaps = 12/339 (3%)
 Frame = -3

Query: 1200 VMLACEKYNLVHEFFRKVQKTFIPNALNYKVLLNTLWREGKIDEAILAVEDMERRGIVGT 1021
            VM  C KYNLVHEFF KVQK+ IPNAL YKVL+NTLWREGK DEA+LAV+DME+RG+VG+
Sbjct: 207  VMFVCGKYNLVHEFFWKVQKSSIPNALTYKVLVNTLWREGKTDEAVLAVQDMEKRGVVGS 266

Query: 1020 ASVYYDLARCLCSAGKCKEALLQIDKLCRVANKPLVVTYTGLIQACIDSGNIENAAFMFN 841
            A++YYDLARCLCSAG+C+EAL+QI+K+C+VANKPLVVTYTGLIQ C+DSGNI+NAAF+FN
Sbjct: 267  AALYYDLARCLCSAGRCQEALMQIEKICKVANKPLVVTYTGLIQVCLDSGNIQNAAFIFN 326

Query: 840  HMQNFCSPNLVTYNIMLKAFLDNGKFEEANELFLTILG-----------NRKVMPDRYTF 694
             M  FCSPNL+T N+MLKA+L++  FEEA  LF  +LG           N +V+PD YTF
Sbjct: 327  QMHEFCSPNLITCNVMLKAYLEHRMFEEAKGLFGKMLGDGNHISSKSDYNDRVLPDIYTF 386

Query: 693  NVMLDACSAERKWEDLEFAYVNMLKYGHHFNAQRHLKIVLDACTAGKEEILETTWKHLAR 514
            N M+DAC+AE++W DLE+ Y  ML++G HFNA+RHL+I+LDA  AGKEE+LETTWK LA 
Sbjct: 387  NTMIDACNAEKRWHDLEYVYERMLRHGFHFNAKRHLRIILDASRAGKEELLETTWKSLAG 446

Query: 513  GDRVPPFPLIDAMFRLKLEEGDLTEAISCFACHPSIE-SRAFSTKRWLNFLMENSRRFEK 337
              RVPP PLI   F +KLE+GD   A+S    H   E    FS + WLN   EN+ RF+ 
Sbjct: 447  EGRVPP-PLIKERFCMKLEKGDCAAAVSSITGHHMNELQEPFSKRAWLNLFTENAGRFQT 505

Query: 336  HILVKLIHAADSLVTRTDAQKLILQNFRLACEEFLSKRM 220
              LV+L+H A   + R D    +LQN   +C+EFL   M
Sbjct: 506  ESLVELMHEASVRIARADMPNPVLQNLLASCKEFLRTHM 544


>ref|XP_004172319.1| PREDICTED: pentatricopeptide repeat-containing protein At1g30610,
            chloroplastic-like, partial [Cucumis sativus]
          Length = 477

 Score =  400 bits (1029), Expect = e-109
 Identities = 191/348 (54%), Positives = 254/348 (72%), Gaps = 11/348 (3%)
 Frame = -3

Query: 1200 VMLACEKYNLVHEFFRKVQKTFIPNALNYKVLLNTLWREGKIDEAILAVEDMERRGIVGT 1021
            VML C KYNLVHEFFRKVQK+ IPNAL YKVL+NTLW+EGK DEA+LA+E+ME RGIVG+
Sbjct: 130  VMLECGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIENMEIRGIVGS 189

Query: 1020 ASVYYDLARCLCSAGKCKEALLQIDKLCRVANKPLVVTYTGLIQACIDSGNIENAAFMFN 841
            A++YYD ARCLCSAG+CKEAL+Q++K+C+VANKPLVVTYTGLIQAC+DS ++++A ++FN
Sbjct: 190  AALYYDFARCLCSAGRCKEALMQMEKICKVANKPLVVTYTGLIQACLDSKDLQSAVYIFN 249

Query: 840  HMQNFCSPNLVTYNIMLKAFLDNGKFEEANELFLTILGNR-----------KVMPDRYTF 694
            HM+ FCSPNLVTYNI+LK +L++G FEEA ELF  +   R           +V+PD Y F
Sbjct: 250  HMKAFCSPNLVTYNILLKGYLEHGMFEEARELFQNLSEQRRNISTVSDYRDRVLPDIYMF 309

Query: 693  NVMLDACSAERKWEDLEFAYVNMLKYGHHFNAQRHLKIVLDACTAGKEEILETTWKHLAR 514
            N MLDA  AE++W+D  + Y  M  YG+HFN +RHL+++L+A   GK+E+LETTWKHLA+
Sbjct: 310  NTMLDASFAEKRWDDFSYFYNQMFLYGYHFNPKRHLRMILEAARGGKDELLETTWKHLAQ 369

Query: 513  GDRVPPFPLIDAMFRLKLEEGDLTEAISCFACHPSIESRAFSTKRWLNFLMENSRRFEKH 334
             DR PP PL+   F +KL  GD +EA+S    H S ++  FS   WLN L E  +RF + 
Sbjct: 370  ADRTPPPPLLKERFCMKLARGDYSEALSSIWSHNSGDAHHFSESAWLNLLKE--KRFPRD 427

Query: 333  ILVKLIHAADSLVTRTDAQKLILQNFRLACEEFLSKRMKFGDSDSLET 190
             +++LIH    ++TR ++   + +N  L+C+EF   R+   D    ET
Sbjct: 428  TVIELIHKVGMVLTRNESPNPVFKNLLLSCKEFCRTRISLADHRLEET 475


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