BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00029111
         (981 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD22368.1| putative non-LTR retroelement reverse transcripta...   163   5e-38
dbj|BAB09815.1| non-LTR retroelement reverse transcriptase-like ...   153   7e-35
gb|AAC26674.1| putative non-LTR retroelement reverse transcripta...   151   3e-34
gb|AAF23831.1|AC007234_3 F1E22.12 [Arabidopsis thaliana]              150   3e-34
sp|P0C2F6.1|RNHX1_ARATH RecName: Full=Putative ribonuclease H pr...   150   3e-34

>gb|AAD22368.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 321

 Score =  163 bits (413), Expect = 5e-38
 Identities = 97/262 (37%), Positives = 136/262 (51%), Gaps = 6/262 (2%)
 Frame = +3

Query: 12  CFHCGHPQETILHVLRDCPSAREVWSQIAPNHCLQYAFSLQWENWFKEVIIRDGAIMNCN 191
           C  C   +ETILHVLRDCP+   +WS++ P   ++  F+     W  + +   G+     
Sbjct: 35  CQICQGGEETILHVLRDCPAMAGIWSRLVPRDQIRQFFTASLLEWIYKNLRERGS----- 89

Query: 192 VKWSTVAAVTCWHLWKMRNDRIFKG-----ETMPSTILTSQIWTTSKHITEGRERAMQQI 356
             W TV  +  W  WK R   IF G     + +      ++    +    +G E  + ++
Sbjct: 90  --WPTVFVMAVWWGWKWRCGNIFGGNGKCRDRVKFIKDLAEEVAIANAFVKGNEVRVSRV 147

Query: 357 GSS*EARLKDSTWKRPPEGWVKLNSDGARNMDTGWATAGGAIRDHVGQWICGYNRNIGKC 536
                 RL   +W  P +GWVKLN+DGA   + G+ATAGG +RDH G WI G+  NIG C
Sbjct: 148 -----ERLV--SWVSPEDGWVKLNTDGASRGNPGFATAGGVLRDHNGAWIGGFAVNIGVC 200

Query: 537 SILQAELWGCLDGLTIAWERGFRRIEVELDSTKAEELISKGTEDMTSSSIARRIQL-ICN 713
           S   AELWG   GL IAW RG RR+E+E+DS      ++ G  D    S   R+     +
Sbjct: 201 SAPLAELWGVYYGLFIAWGRGARRVELEVDSKMVVGFLTTGIADSHPLSFLLRLCYDFLS 260

Query: 714 KEWKIRCKHIYREANKVADVLA 779
           K W +R  H+YREAN++AD LA
Sbjct: 261 KGWIVRISHVYREANRLADGLA 282


>dbj|BAB09815.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
            thaliana]
          Length = 676

 Score =  153 bits (386), Expect = 7e-35
 Identities = 90/262 (34%), Positives = 135/262 (51%), Gaps = 6/262 (2%)
 Frame = +3

Query: 12   CFHCGHPQETILHVLRDCPSAREVWSQIAPNHCLQYAFSLQWENW-FKEVIIRDGAIMNC 188
            C  C    E+++HVLRDCP+   +W ++ P    +  F      W +  +  R  +    
Sbjct: 385  CPLCKGASESLIHVLRDCPAMMGIWMRVVPVMEQRRFFETSLLEWMYGNLKERSDSERR- 443

Query: 189  NVKWSTVAAVTCWHLWKMRNDRIFKGETMPSTILTSQIWTTSKHITEGRERAMQQIGSS* 368
               W T+ A+T W  WK R   +F  ++        ++      + E     +   G + 
Sbjct: 444  --SWPTLFALTVWWGWKWRCGYVFGEDSR----CRDRVKFLKSAVAEVEAAHLAANGDAR 497

Query: 369  EARLKDS--TWKRPPEGWVKLNSDGARNMDTGWATAGGAIRDHVGQWICGYNRNIGKCSI 542
            E  L +    W++P EGWV +N+DGA + + G ATAGG IRD  G W+ G+  NIG CS 
Sbjct: 498  EDVLVERMIAWRKPAEGWVTMNTDGASHGNPGQATAGGVIRDEHGSWLVGFALNIGVCSA 557

Query: 543  LQAELWGCLDGLTIAWERGFRRIEVELDSTKAEELISKGTEDMTSSSIARRIQL---ICN 713
              AELWG   GL +AWERG+RR+ +E+DS      +  G  D  S  +A  ++L     +
Sbjct: 558  PLAELWGVYYGLVVAWERGWRRVRLEVDSALVVGFLQSGIGD--SHPLAFLVRLCHGFIS 615

Query: 714  KEWKIRCKHIYREANKVADVLA 779
            K+W +R  H+YREAN++AD LA
Sbjct: 616  KDWIVRITHVYREANRLADGLA 637


>gb|AAC26674.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 970

 Score =  151 bits (381), Expect = 3e-34
 Identities = 91/270 (33%), Positives = 131/270 (48%), Gaps = 12/270 (4%)
 Frame = +3

Query: 6    ASCFHCGHPQETILHVLRDCPSAREVWSQIAPNHCLQYAFSLQWENWFKEVIIRDGAIMN 185
            A+C  C    E+ILHVLRDCP+   +W ++ P    Q  F  Q+E  F  +    G    
Sbjct: 683  ATCSVCNGADESILHVLRDCPAMTPIWQRLLPQR-RQNEFFSQFEWLFTNLDPAKG---- 737

Query: 186  CNVKWSTVAAVTCWHLWKMR-----------NDRIFKGETMPSTILTSQIWTTSKHITEG 332
                W T+ ++  W  WK R            DR+   + +   +  + + T + H+   
Sbjct: 738  ---DWPTLFSMGIWWAWKWRCGDVFGERKLCRDRLKFIKDIAEEVRKAHVGTLNNHVKRA 794

Query: 333  RERAMQQIGSS*EARLKDSTWKRPPEGWVKLNSDGARNMDTGWATAGGAIRDHVGQWICG 512
            R   M +             WK P + WVKL +DGA     G A A GAI +  G+W+ G
Sbjct: 795  RVERMIR-------------WKAPSDRWVKLTTDGASRGHQGLAAASGAILNLQGEWLGG 841

Query: 513  YNRNIGKCSILQAELWGCLDGLTIAWERGFRRIEVELDSTKAEELISKG-TEDMTSSSIA 689
            +  NIG C    AELWG   GL IAW++GFRR+E+ LDS      +S G ++    S + 
Sbjct: 842  FALNIGSCDAPLAELWGAYYGLLIAWDKGFRRVELNLDSELVVGFLSTGISKAHPLSFLV 901

Query: 690  RRIQLICNKEWKIRCKHIYREANKVADVLA 779
            R  Q    ++W +R  H+YREAN++AD LA
Sbjct: 902  RLCQGFFTRDWLVRVSHVYREANRLADGLA 931


>gb|AAF23831.1|AC007234_3 F1E22.12 [Arabidopsis thaliana]
          Length = 1055

 Score =  150 bits (380), Expect = 3e-34
 Identities = 95/267 (35%), Positives = 131/267 (49%), Gaps = 11/267 (4%)
 Frame = +3

Query: 12   CFHCGHPQETILHVLRDCPSAREVWSQIAPNHCLQYAFSLQWENWFKEVIIRDGAIMNC- 188
            C  C    E++LHVLRDCP+   +W ++ P    Q  FS     W  + +   G    C 
Sbjct: 438  CQVCKGGVESMLHVLRDCPAQLGIWVRVVPQRRQQGFFSKSLFEWLYDNL---GDRSGCE 494

Query: 189  NVKWSTVAAVTCWHLWKMRNDRIFKGETM-PSTILTSQIWTT------SKHITEG--RER 341
            ++ WST+ AV  W  WK R   IF   T     +   + W        S ++  G  + R
Sbjct: 495  DIPWSTIFAVIIWWGWKWRCGNIFGENTKCRDRVKFVKEWAVEVYRAHSGNVLVGITQPR 554

Query: 342  AMQQIGSS*EARLKDSTWKRPPEGWVKLNSDGARNMDTGWATAGGAIRDHVGQWICGYNR 521
              + IG           W  P  GWVK+N+DGA   + G A+AGG +RD  G W  G++ 
Sbjct: 555  VERMIG-----------WVSPCVGWVKVNTDGASRGNPGLASAGGVLRDCTGAWCGGFSL 603

Query: 522  NIGKCSILQAELWGCLDGLTIAWERGFRRIEVELDSTKAEELISKGTEDM-TSSSIARRI 698
            NIG+CS  QAELWG   GL  AWE+   R+E+E+DS      +  G  D    S + R  
Sbjct: 604  NIGRCSAPQAELWGVYYGLYFAWEKKVPRVELEVDSEVIVGFLKTGISDSHPLSFLVRLC 663

Query: 699  QLICNKEWKIRCKHIYREANKVADVLA 779
                 K+W +R  H+YREAN++AD LA
Sbjct: 664  HGFLQKDWLVRIVHVYREANRLADGLA 690


>sp|P0C2F6.1|RNHX1_ARATH RecName: Full=Putative ribonuclease H protein At1g65750
          Length = 620

 Score =  150 bits (380), Expect = 3e-34
 Identities = 95/267 (35%), Positives = 131/267 (49%), Gaps = 11/267 (4%)
 Frame = +3

Query: 12   CFHCGHPQETILHVLRDCPSAREVWSQIAPNHCLQYAFSLQWENWFKEVIIRDGAIMNC- 188
            C  C    E++LHVLRDCP+   +W ++ P    Q  FS     W  + +   G    C 
Sbjct: 329  CQVCKGGVESMLHVLRDCPAQLGIWVRVVPQRRQQGFFSKSLFEWLYDNL---GDRSGCE 385

Query: 189  NVKWSTVAAVTCWHLWKMRNDRIFKGETM-PSTILTSQIWTT------SKHITEG--RER 341
            ++ WST+ AV  W  WK R   IF   T     +   + W        S ++  G  + R
Sbjct: 386  DIPWSTIFAVIIWWGWKWRCGNIFGENTKCRDRVKFVKEWAVEVYRAHSGNVLVGITQPR 445

Query: 342  AMQQIGSS*EARLKDSTWKRPPEGWVKLNSDGARNMDTGWATAGGAIRDHVGQWICGYNR 521
              + IG           W  P  GWVK+N+DGA   + G A+AGG +RD  G W  G++ 
Sbjct: 446  VERMIG-----------WVSPCVGWVKVNTDGASRGNPGLASAGGVLRDCTGAWCGGFSL 494

Query: 522  NIGKCSILQAELWGCLDGLTIAWERGFRRIEVELDSTKAEELISKGTEDM-TSSSIARRI 698
            NIG+CS  QAELWG   GL  AWE+   R+E+E+DS      +  G  D    S + R  
Sbjct: 495  NIGRCSAPQAELWGVYYGLYFAWEKKVPRVELEVDSEVIVGFLKTGISDSHPLSFLVRLC 554

Query: 699  QLICNKEWKIRCKHIYREANKVADVLA 779
                 K+W +R  H+YREAN++AD LA
Sbjct: 555  HGFLQKDWLVRIVHVYREANRLADGLA 581