BLASTX nr result

ID: Cephaelis21_contig00029109 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00029109
         (202 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234182.1| exportin 1 [Solanum lycopersicum] gi|2680535...    63   2e-08
ref|NP_197204.1| exportin 1A [Arabidopsis thaliana] gi|5931694|e...    62   6e-08
ref|XP_003633992.1| PREDICTED: exportin-1 isoform 3 [Vitis vinif...    62   6e-08
ref|XP_003633991.1| PREDICTED: exportin-1 isoform 2 [Vitis vinif...    62   6e-08
ref|NP_001190324.1| exportin 1A [Arabidopsis thaliana] gi|332004...    62   6e-08

>ref|NP_001234182.1| exportin 1 [Solanum lycopersicum] gi|268053527|gb|ACY92425.1|
           exportin-1 [Solanum lycopersicum]
          Length = 1075

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 29/36 (80%), Positives = 34/36 (94%)
 Frame = +1

Query: 25  LQVLEGVIKYRWNALPVE*HNGMKNYISEVIIKVAA 132
           LQVLEGVIKYRWNALPVE  +GMKNYISEVI+K+++
Sbjct: 71  LQVLEGVIKYRWNALPVEQRDGMKNYISEVIVKLSS 106


>ref|NP_197204.1| exportin 1A [Arabidopsis thaliana] gi|5931694|emb|CAB56597.1|
           Exportin1 (XPO1) protein [Arabidopsis thaliana]
           gi|7671510|emb|CAB89280.1| Exportin1 (XPO1) protein
           [Arabidopsis thaliana] gi|9755703|emb|CAC01715.1|
           Exportin1 (XPO1) protein [Arabidopsis thaliana]
           gi|15810123|gb|AAL07205.1| putative exportin1 protein
           XPO1 [Arabidopsis thaliana] gi|20465601|gb|AAM20283.1|
           putative Exportin1 (XPO1) protein [Arabidopsis thaliana]
           gi|332004990|gb|AED92373.1| exportin 1A [Arabidopsis
           thaliana]
          Length = 1075

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 28/36 (77%), Positives = 34/36 (94%)
 Frame = +1

Query: 25  LQVLEGVIKYRWNALPVE*HNGMKNYISEVIIKVAA 132
           LQVLEGVIKYRWNALPVE  +GMKNYISEVI+++++
Sbjct: 71  LQVLEGVIKYRWNALPVEQRDGMKNYISEVIVQLSS 106


>ref|XP_003633992.1| PREDICTED: exportin-1 isoform 3 [Vitis vinifera]
          Length = 1069

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 28/36 (77%), Positives = 34/36 (94%)
 Frame = +1

Query: 25  LQVLEGVIKYRWNALPVE*HNGMKNYISEVIIKVAA 132
           LQVLEGVIKYRWNALPVE  +GMKNYISEVI+++++
Sbjct: 71  LQVLEGVIKYRWNALPVEQRDGMKNYISEVIVQLSS 106


>ref|XP_003633991.1| PREDICTED: exportin-1 isoform 2 [Vitis vinifera]
          Length = 1061

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 28/36 (77%), Positives = 34/36 (94%)
 Frame = +1

Query: 25  LQVLEGVIKYRWNALPVE*HNGMKNYISEVIIKVAA 132
           LQVLEGVIKYRWNALPVE  +GMKNYISEVI+++++
Sbjct: 71  LQVLEGVIKYRWNALPVEQRDGMKNYISEVIVQLSS 106


>ref|NP_001190324.1| exportin 1A [Arabidopsis thaliana] gi|332004991|gb|AED92374.1|
           exportin 1A [Arabidopsis thaliana]
          Length = 1060

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 28/36 (77%), Positives = 34/36 (94%)
 Frame = +1

Query: 25  LQVLEGVIKYRWNALPVE*HNGMKNYISEVIIKVAA 132
           LQVLEGVIKYRWNALPVE  +GMKNYISEVI+++++
Sbjct: 71  LQVLEGVIKYRWNALPVEQRDGMKNYISEVIVQLSS 106


Top