BLASTX nr result
ID: Cephaelis21_contig00029074
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cephaelis21_contig00029074
(570 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI25349.3| unnamed protein product [Vitis vinifera] 162 4e-38
ref|XP_002275344.2| PREDICTED: pentatricopeptide repeat-containi... 151 6e-35
ref|NP_181604.1| pentatricopeptide repeat-containing protein [Ar... 149 2e-34
ref|XP_002879887.1| hypothetical protein ARALYDRAFT_903365 [Arab... 147 9e-34
ref|XP_002319343.1| predicted protein [Populus trichocarpa] gi|2... 145 5e-33
>emb|CBI25349.3| unnamed protein product [Vitis vinifera]
Length = 1241
Score = 162 bits (410), Expect = 4e-38
Identities = 82/148 (55%), Positives = 109/148 (73%)
Frame = +1
Query: 109 QIKALVKQDRHWEALRIYAEESCFPLETSKFAFPSLLKACASLSNPCYGNAIHATIITTG 288
+IKALV+Q ++ +AL ++++ L T+KF FPSLLK CASLSN +G IHA+I+T G
Sbjct: 412 EIKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASIVTMG 471
Query: 289 LQFDPFIATSLVNMYVKCGELYNALQVFDNGLHWKALATDVTLWNSMIDGYFKSRLIDEG 468
LQ DP+IATSL+NMYVKCG L +ALQVFD + A D+T+WN +IDGYFK +EG
Sbjct: 472 LQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGHFEEG 531
Query: 469 LLKFRQMQLSGVIPDGYSLCILLGLFDR 552
L +F +MQ G+ PDGYSL I+LG+ +R
Sbjct: 532 LAQFCRMQELGIRPDGYSLSIVLGICNR 559
Score = 73.6 bits (179), Expect = 2e-11
Identities = 43/139 (30%), Positives = 67/139 (48%)
Frame = +1
Query: 97 LLNSQIKALVKQDRHWEALRIYAEESCFPLETSKFAFPSLLKACASLSNPCYGNAIHATI 276
L N+ I A + R ++AL +Y + F SLL C+ + + +G +HA +
Sbjct: 717 LRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEV 776
Query: 277 ITTGLQFDPFIATSLVNMYVKCGELYNALQVFDNGLHWKALATDVTLWNSMIDGYFKSRL 456
I +Q + I ++L+ MY KCG +A VF + DV W SMI G+ ++R
Sbjct: 777 IKRSMQSNVAIQSALLTMYYKCGSTEDADSVF-----YTMKERDVVAWGSMIAGFCQNRR 831
Query: 457 IDEGLLKFRQMQLSGVIPD 513
+ L FR M+ GV D
Sbjct: 832 FKDALDLFRAMEKEGVKAD 850
>ref|XP_002275344.2| PREDICTED: pentatricopeptide repeat-containing protein At2g40720
[Vitis vinifera]
Length = 836
Score = 151 bits (382), Expect = 6e-35
Identities = 79/153 (51%), Positives = 107/153 (69%)
Frame = +1
Query: 34 MYFSLLKLRSFSTLLRTHSPFLLNSQIKALVKQDRHWEALRIYAEESCFPLETSKFAFPS 213
M+F+ R F +L +T +NS+IKALV+Q ++ +AL ++++ L T+KF FPS
Sbjct: 1 MHFNQFISRKFYSLRQTEVSPSINSKIKALVQQGKYSQALELHSKTPHSALTTAKFTFPS 60
Query: 214 LLKACASLSNPCYGNAIHATIITTGLQFDPFIATSLVNMYVKCGELYNALQVFDNGLHWK 393
LLK CASLSN +G IHA+I+T GLQ DP+IATSL+NMYVKCG L +ALQVFD +
Sbjct: 61 LLKTCASLSNLYHGRTIHASIVTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESR 120
Query: 394 ALATDVTLWNSMIDGYFKSRLIDEGLLKFRQMQ 492
A D+T+WN +IDGYFK +EGL +F +MQ
Sbjct: 121 DSAPDITVWNPVIDGYFKYGHFEEGLAQFCRMQ 153
Score = 73.6 bits (179), Expect = 2e-11
Identities = 43/139 (30%), Positives = 67/139 (48%)
Frame = +1
Query: 97 LLNSQIKALVKQDRHWEALRIYAEESCFPLETSKFAFPSLLKACASLSNPCYGNAIHATI 276
L N+ I A + R ++AL +Y + F SLL C+ + + +G +HA +
Sbjct: 312 LRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEV 371
Query: 277 ITTGLQFDPFIATSLVNMYVKCGELYNALQVFDNGLHWKALATDVTLWNSMIDGYFKSRL 456
I +Q + I ++L+ MY KCG +A VF + DV W SMI G+ ++R
Sbjct: 372 IKRSMQSNVAIQSALLTMYYKCGSTEDADSVF-----YTMKERDVVAWGSMIAGFCQNRR 426
Query: 457 IDEGLLKFRQMQLSGVIPD 513
+ L FR M+ GV D
Sbjct: 427 FKDALDLFRAMEKEGVKAD 445
>ref|NP_181604.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75276036|sp|Q7XJN6.1|PP197_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g40720 gi|330254774|gb|AEC09868.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 860
Score = 149 bits (377), Expect = 2e-34
Identities = 81/164 (49%), Positives = 112/164 (68%), Gaps = 3/164 (1%)
Frame = +1
Query: 88 SPFLLNSQIKALVKQDRHWEALRIYAE-ESCFPLETSKFAFPSLLKACASLSNPCYGNAI 264
SP +NS I+AL+++ + +AL +Y++ + P TS F FPSLLKAC++L+N YG I
Sbjct: 23 SPASINSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTI 82
Query: 265 HATIITTGLQFDPFIATSLVNMYVKCGELYNALQVFDNGLHWKA--LATDVTLWNSMIDG 438
H +++ G ++DPFIATSLVNMYVKCG L A+QVFD ++ A DVT+WNSMIDG
Sbjct: 83 HGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDG 142
Query: 439 YFKSRLIDEGLLKFRQMQLSGVIPDGYSLCILLGLFDRNCGNVR 570
YFK R EG+ FR+M + GV PD +SL I++ + + GN R
Sbjct: 143 YFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKE-GNFR 185
Score = 69.7 bits (169), Expect = 3e-10
Identities = 44/146 (30%), Positives = 73/146 (50%), Gaps = 2/146 (1%)
Frame = +1
Query: 106 SQIKALVKQDRHWEALRIYAE--ESCFPLETSKFAFPSLLKACASLSNPCYGNAIHATII 279
S I L K + EAL+++ + + L+ S+ ACA L +G +H ++I
Sbjct: 444 SLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMI 503
Query: 280 TTGLQFDPFIATSLVNMYVKCGELYNALQVFDNGLHWKALATDVTLWNSMIDGYFKSRLI 459
TGL + F+ +SL+++Y KCG AL+VF + ++ WNSMI Y ++ L
Sbjct: 504 KTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTS-----MSTENMVAWNSMISCYSRNNLP 558
Query: 460 DEGLLKFRQMQLSGVIPDGYSLCILL 537
+ + F M G+ PD S+ +L
Sbjct: 559 ELSIDLFNLMLSQGIFPDSVSITSVL 584
Score = 66.2 bits (160), Expect = 4e-09
Identities = 38/122 (31%), Positives = 62/122 (50%), Gaps = 6/122 (4%)
Frame = +1
Query: 202 AFPSLLKACASLSNPCYGNAIHATIITTGLQFDPFIATSLVNMYVKCGELYNALQVFDNG 381
+F L AC+ N +G IH ++ GL DP++ TSL++MY KCG + A VF
Sbjct: 274 SFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFS-- 331
Query: 382 LHWKALATDVTLWNSMIDGYFKSRLIDEGLLKFRQMQLSGVIPDGYSL------CILLGL 543
+ + +WN+M+ Y ++ L F M+ V+PD ++L C +LGL
Sbjct: 332 ---CVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGL 388
Query: 544 FD 549
++
Sbjct: 389 YN 390
>ref|XP_002879887.1| hypothetical protein ARALYDRAFT_903365 [Arabidopsis lyrata subsp.
lyrata] gi|297325726|gb|EFH56146.1| hypothetical protein
ARALYDRAFT_903365 [Arabidopsis lyrata subsp. lyrata]
Length = 1359
Score = 147 bits (372), Expect = 9e-34
Identities = 90/185 (48%), Positives = 118/185 (63%), Gaps = 5/185 (2%)
Frame = +1
Query: 31 DMYFSLLKL---RSFSTLLRTH-SPFLLNSQIKALVKQDRHWEALRIYAE-ESCFPLETS 195
DM F L + R S L ++ SP +NS I+AL+++ + +AL +Y + + PL TS
Sbjct: 501 DMRFKLHDVHIRRRLSRLADSYISPASVNSGIRALIQKGEYLQALHLYTKHDGSSPLWTS 560
Query: 196 KFAFPSLLKACASLSNPCYGNAIHATIITTGLQFDPFIATSLVNMYVKCGELYNALQVFD 375
F FPSLLKAC+SL+N G IH +II G ++DPFIATSLVNMYVKCG L A+QVFD
Sbjct: 561 VFTFPSLLKACSSLTNLSSGKTIHGSIIVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFD 620
Query: 376 NGLHWKALATDVTLWNSMIDGYFKSRLIDEGLLKFRQMQLSGVIPDGYSLCILLGLFDRN 555
A DVT+ NSMIDGYFK R EG+ FR+M + GV PD +SL I++ + +
Sbjct: 621 GWSQSGVSARDVTVCNSMIDGYFKFRRFKEGVGCFRRMLVLGVRPDAFSLSIVVSVLCKE 680
Query: 556 CGNVR 570
GN R
Sbjct: 681 -GNFR 684
Score = 70.1 bits (170), Expect = 2e-10
Identities = 43/146 (29%), Positives = 73/146 (50%), Gaps = 2/146 (1%)
Frame = +1
Query: 106 SQIKALVKQDRHWEALRIYAE--ESCFPLETSKFAFPSLLKACASLSNPCYGNAIHATII 279
S I L K + EAL+++ + + L+ S++ ACA L +G +H ++I
Sbjct: 943 SLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVINACAGLEALSFGLQVHGSMI 1002
Query: 280 TTGLQFDPFIATSLVNMYVKCGELYNALQVFDNGLHWKALATDVTLWNSMIDGYFKSRLI 459
TG + F+ +SL+++Y KCG AL+VF + ++ WNSMI Y ++ L
Sbjct: 1003 KTGQVLNVFVGSSLIDLYSKCGLPEMALKVFTS-----MRPENIVAWNSMISCYSRNNLP 1057
Query: 460 DEGLLKFRQMQLSGVIPDGYSLCILL 537
+ + F M G+ PD S+ +L
Sbjct: 1058 ELSIELFNLMLSQGIFPDSVSITSVL 1083
Score = 68.9 bits (167), Expect = 5e-10
Identities = 40/140 (28%), Positives = 68/140 (48%), Gaps = 6/140 (4%)
Frame = +1
Query: 148 ALRIYAEESCFPLETSKFAFPSLLKACASLSNPCYGNAIHATIITTGLQFDPFIATSLVN 327
+L +Y ++ +F L AC+ N +G IH ++ GL DP+++TSL++
Sbjct: 755 SLELYMLAKSNSVKLVSTSFTGALGACSQSENSAFGRQIHCDVVKMGLDNDPYVSTSLLS 814
Query: 328 MYVKCGELYNALQVFDNGLHWKALATDVTLWNSMIDGYFKSRLIDEGLLKFRQMQLSGVI 507
MY KCG + A VF + + +WN+M+ Y ++ L F M+ V+
Sbjct: 815 MYSKCGMVGEAETVFS-----CVVDKRLEIWNAMVAAYVENDNGYSALELFGFMRQKSVL 869
Query: 508 PDGYSL------CILLGLFD 549
PD ++L C + GL+D
Sbjct: 870 PDSFTLSNVISCCSMFGLYD 889
>ref|XP_002319343.1| predicted protein [Populus trichocarpa] gi|222857719|gb|EEE95266.1|
predicted protein [Populus trichocarpa]
Length = 848
Score = 145 bits (366), Expect = 5e-33
Identities = 83/177 (46%), Positives = 110/177 (62%), Gaps = 1/177 (0%)
Frame = +1
Query: 34 MYFSLLKLRSFSTLLRTHSPFLLNSQIKALVKQDRHWEALRIYAEESCFPLETSKFAFPS 213
MYF R S L HS L++ +I LV+Q ++ +AL+ Y+ PL ++F +PS
Sbjct: 1 MYFIQQISRKLSNL--AHSD-LIDPKIVTLVQQGQYVDALQFYSRN---PLNATRFTYPS 54
Query: 214 LLKACASLSNPCYGNAIHATIITTGLQF-DPFIATSLVNMYVKCGELYNALQVFDNGLHW 390
LLKAC LSN YG IH+TIIT G + DP+I TSL+N Y KCG NA++VFD
Sbjct: 55 LLKACGFLSNLQYGKTIHSTIITKGFFYSDPYITTSLINFYFKCGSFGNAVKVFDKLPES 114
Query: 391 KALATDVTLWNSMIDGYFKSRLIDEGLLKFRQMQLSGVIPDGYSLCILLGLFDRNCG 561
+ DVT WNS+++GYF+ EG+ +F +MQL GV PD YSLCILLG D + G
Sbjct: 115 EVSGQDVTFWNSIVNGYFRFGHKKEGIAQFCRMQLFGVRPDAYSLCILLGASDGHLG 171
Score = 67.0 bits (162), Expect = 2e-09
Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 7/143 (4%)
Frame = +1
Query: 142 WE-ALRIYAEESCFPLETSKFAFPSLLKACASLSNPCYGNAIHATIITTGLQFDPFIATS 318
WE +L +Y ++ +F S L AC +G +H ++ G + DP++ TS
Sbjct: 237 WENSLEVYLLAKNENVKLVSASFTSTLSACCQGEFVSFGMQVHCDLVKLGFENDPYVCTS 296
Query: 319 LVNMYVKCGELYNALQVFDNGLHWKALATDVTLWNSMIDGYFKSRLIDEGLLKFRQMQLS 498
L+ MY KC + +A VFD + LWN+MI Y + +GL ++QM++
Sbjct: 297 LLTMYSKCKLVEDAENVFD-----QVSVKKTELWNAMISAYVGNGRSYDGLKIYKQMKVL 351
Query: 499 GVIPDG------YSLCILLGLFD 549
+ PD S C L+G +D
Sbjct: 352 QIPPDSLTATNVLSSCCLVGSYD 374
Score = 66.6 bits (161), Expect = 3e-09
Identities = 38/139 (27%), Positives = 66/139 (47%)
Frame = +1
Query: 97 LLNSQIKALVKQDRHWEALRIYAEESCFPLETSKFAFPSLLKACASLSNPCYGNAIHATI 276
L N+ I A V R ++ L+IY + + ++L +C + + +G IHA +
Sbjct: 324 LWNAMISAYVGNGRSYDGLKIYKQMKVLQIPPDSLTATNVLSSCCLVGSYDFGRLIHAEL 383
Query: 277 ITTGLQFDPFIATSLVNMYVKCGELYNALQVFDNGLHWKALATDVTLWNSMIDGYFKSRL 456
+ +Q + + ++L+ MY KCG +A +F+ DV W SMI G+ ++R
Sbjct: 384 VKRPIQSNVALQSALLTMYSKCGNSDDANSIFNT-----IKGRDVVAWGSMISGFCQNRK 438
Query: 457 IDEGLLKFRQMQLSGVIPD 513
E L + M + G PD
Sbjct: 439 YMEALEFYNSMTVYGEKPD 457
Score = 65.1 bits (157), Expect = 8e-09
Identities = 44/144 (30%), Positives = 69/144 (47%)
Frame = +1
Query: 106 SQIKALVKQDRHWEALRIYAEESCFPLETSKFAFPSLLKACASLSNPCYGNAIHATIITT 285
S I + ++ EAL Y + + + S++ AC L N G IH I +
Sbjct: 428 SMISGFCQNRKYMEALEFYNSMTVYGEKPDSDIMASVVSACTGLKNVNLGCTIHGLAIKS 487
Query: 286 GLQFDPFIATSLVNMYVKCGELYNALQVFDNGLHWKALATDVTLWNSMIDGYFKSRLIDE 465
GL+ D F+A+SLV+MY K +N ++ N L ++ WNS+I Y ++ L D
Sbjct: 488 GLEQDVFVASSLVDMYSK----FNFPKMSGNVFSDMPL-KNLVAWNSIISCYCRNGLPDL 542
Query: 466 GLLKFRQMQLSGVIPDGYSLCILL 537
+ F QM G+ PD S+ +L
Sbjct: 543 SISLFSQMTQYGLFPDSVSITSVL 566