BLASTX nr result

ID: Cephaelis21_contig00029053 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00029053
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD37019.2| putative non-LTR retrolelement reverse transcript...    77   1e-12
gb|ABW81176.1| non-LTR reverse transcriptase [Arabidopsis cebenn...    75   7e-12
emb|CAN72933.1| hypothetical protein VITISV_020615 [Vitis vinifera]    73   2e-11
gb|AEL30359.1| RNA-directed DNA polymerase [Arachis hypogaea]          72   4e-11
emb|CCA66153.1| hypothetical protein [Beta vulgaris subsp. vulga...    72   5e-11

>gb|AAD37019.2| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 855

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 43/100 (43%), Positives = 53/100 (53%), Gaps = 1/100 (1%)
 Frame = +3

Query: 3    IKGIQEALEKKPNRYXXXXXXXXXXXXXKTLDQEEALWKQKSCSDWLALGDRNTKYFHSK 182
            IK +QE LE                     L+QEE LW QKS   W+ LGDRNTKYFH+ 
Sbjct: 716  IKVVQELLEINQTDNLLSKEEELIKEFDVVLEQEEVLWFQKSREKWVELGDRNTKYFHTM 775

Query: 183  VKVRRRNNFISNLLIED-KWEDDQEKLKAEAVSYFKRLYN 299
              VRRR N I  L  +D  W   Q++L+  AV Y+ RLY+
Sbjct: 776  TVVRRRRNRIEMLKADDGSWVSQQQELEKMAVDYYSRLYS 815


>gb|ABW81176.1| non-LTR reverse transcriptase [Arabidopsis cebennensis]
          Length = 464

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 36/70 (51%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
 Frame = +3

Query: 93  LDQEEALWKQKSCSDWLALGDRNTKYFHSKVKVRRRNNFISNLL-IEDKWEDDQEKLKAE 269
           L+QEE +W QKS   W+ALGDRNTKYFH+   +RRR N I  L   E KW ++ E+L   
Sbjct: 302 LEQEEIVWFQKSREKWIALGDRNTKYFHTSTIIRRRRNQIEMLKDDEGKWVEEPEELAKM 361

Query: 270 AVSYFKRLYN 299
           AV Y+++LY+
Sbjct: 362 AVEYYQKLYS 371


>emb|CAN72933.1| hypothetical protein VITISV_020615 [Vitis vinifera]
          Length = 705

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 33/69 (47%), Positives = 45/69 (65%)
 Frame = +3

Query: 102 EEALWKQKSCSDWLALGDRNTKYFHSKVKVRRRNNFISNLLIEDKWEDDQEKLKAEAVSY 281
           EE  W+QKS + WL  GD NTK+FH     RRR NFIS+L++   W D +E+LK    SY
Sbjct: 96  EEISWRQKSRALWLKEGDSNTKFFHRMANARRRGNFISSLIVRGVWLDKEEELKEGIGSY 155

Query: 282 FKRLYNQNV 308
           FK L+ +++
Sbjct: 156 FKSLFEESL 164


>gb|AEL30359.1| RNA-directed DNA polymerase [Arachis hypogaea]
          Length = 1613

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 39/99 (39%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
 Frame = +3

Query: 3   IKGIQEALEKKPNRYXXXXXXXXXXXXXKTLDQEEALWKQKSCSDWLALGDRNTKYFHSK 182
           I  +Q+ LE   + Y              TL QEE LW QKS   W+  GDRNT++FH +
Sbjct: 702 INYLQKRLEVVDSIYLRQKERQLLDDYNNTLVQEELLWFQKSIEQWVRFGDRNTRFFHIQ 761

Query: 183 VKVRRRNNFISNLLIED-KWEDDQEKLKAEAVSYFKRLY 296
              RR++N I  L ++D  WE D E L  EA S++K L+
Sbjct: 762 TLARRKHNKIHGLFLKDGVWETDPEVLSQEAESFYKSLF 800


>emb|CCA66153.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1381

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 33/72 (45%), Positives = 46/72 (63%)
 Frame = +3

Query: 93  LDQEEALWKQKSCSDWLALGDRNTKYFHSKVKVRRRNNFISNLLIEDKWEDDQEKLKAEA 272
           + ++E LW Q+S   W+  GDRNT+YFH    +RR+ N I +L+IE K  D  E LKA A
Sbjct: 331 MKRKEVLWAQQSRVKWIKEGDRNTRYFHIMATMRRKKNAIESLIIEQKQIDSPEDLKAAA 390

Query: 273 VSYFKRLYNQNV 308
           VSYF  L+ + +
Sbjct: 391 VSYFSELFTEEL 402


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