BLASTX nr result

ID: Cephaelis21_contig00029000 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00029000
         (617 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632321.1| PREDICTED: CST complex subunit STN1-like [Vi...   220   2e-55
ref|XP_002307601.1| predicted protein [Populus trichocarpa] gi|2...   204   8e-51
ref|XP_002524745.1| conserved hypothetical protein [Ricinus comm...   196   4e-48
ref|XP_003612019.1| CST complex subunit STN1 [Medicago truncatul...   182   4e-44
ref|XP_004145384.1| PREDICTED: CST complex subunit STN1-like [Cu...   181   7e-44

>ref|XP_003632321.1| PREDICTED: CST complex subunit STN1-like [Vitis vinifera]
           gi|147810449|emb|CAN65336.1| hypothetical protein
           VITISV_023849 [Vitis vinifera]
          Length = 165

 Score =  220 bits (560), Expect = 2e-55
 Identities = 109/158 (68%), Positives = 126/158 (79%), Gaps = 4/158 (2%)
 Frame = -2

Query: 469 LYNTHVKLLAVDLLKLMPSPTDSSS----FVYKGKRLSRAETVGIVVTRDLKPGKFVKFT 302
           LYNTHVKLLA DLL L  +P+ SSS    F  +G  LSRAET+G V +R+LKP KF+KFT
Sbjct: 5   LYNTHVKLLAFDLLSLTQTPSPSSSDPISFSRRGTPLSRAETLGTVTSRELKPHKFLKFT 64

Query: 301 IDDGFGCIPCVLWLNQLNSPYFSRRRPSDVRLIAQAATNFASCVQLGVLARVRGRITGYR 122
           +DDG GC+PCVLWLN L+SPYFSRR P+DVRLIA  A   AS V+LGVL RVRGRIT YR
Sbjct: 65  VDDGTGCVPCVLWLNHLSSPYFSRRNPADVRLIADLAEYQASEVKLGVLVRVRGRITAYR 124

Query: 121 GAVQITVSDVVVERDPNMQILHWLHCVRLVRKCYDEQP 8
           G VQITVS+V+VERDPNM+ILHWL C++L RKCYD  P
Sbjct: 125 GTVQITVSNVIVERDPNMEILHWLDCIKLARKCYDVMP 162


>ref|XP_002307601.1| predicted protein [Populus trichocarpa] gi|222857050|gb|EEE94597.1|
           predicted protein [Populus trichocarpa]
          Length = 166

 Score =  204 bits (520), Expect = 8e-51
 Identities = 96/155 (61%), Positives = 121/155 (78%), Gaps = 4/155 (2%)
 Frame = -2

Query: 469 LYNTHVKLLAVDLLKLMPSPT----DSSSFVYKGKRLSRAETVGIVVTRDLKPGKFVKFT 302
           L NTHVKLLA DLL L  +P+    D  +F  K   +SR E +G++ +R+LKP KF+KFT
Sbjct: 5   LQNTHVKLLAFDLLSLAQTPSFSTYDPITFTRKNTTISRTEILGVITSRELKPNKFLKFT 64

Query: 301 IDDGFGCIPCVLWLNQLNSPYFSRRRPSDVRLIAQAATNFASCVQLGVLARVRGRITGYR 122
           IDDG GC+ CVLWLNQL SPYFSRR P++V+LIA  A +FAS +++G++ARVRGRI GYR
Sbjct: 65  IDDGTGCVTCVLWLNQLTSPYFSRRNPANVKLIADMAAHFASEIKIGLVARVRGRIAGYR 124

Query: 121 GAVQITVSDVVVERDPNMQILHWLHCVRLVRKCYD 17
           GAVQ+TVSDVVVERDPN++  HWL C+RL R CY+
Sbjct: 125 GAVQVTVSDVVVERDPNVEAFHWLDCIRLARNCYN 159


>ref|XP_002524745.1| conserved hypothetical protein [Ricinus communis]
           gi|223535929|gb|EEF37588.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 166

 Score =  196 bits (497), Expect = 4e-48
 Identities = 96/152 (63%), Positives = 114/152 (75%), Gaps = 4/152 (2%)
 Frame = -2

Query: 463 NTHVKLLAVDLLKLMP----SPTDSSSFVYKGKRLSRAETVGIVVTRDLKPGKFVKFTID 296
           N HVKLLA+DL+ L      SP+D  SF +  K  SRAE +GIV + + KP KF+KFTID
Sbjct: 7   NIHVKLLALDLVSLTQTPPFSPSDPISFSHANKSFSRAEILGIVTSCEHKPHKFLKFTID 66

Query: 295 DGFGCIPCVLWLNQLNSPYFSRRRPSDVRLIAQAATNFASCVQLGVLARVRGRITGYRGA 116
           DG GC+ C+LWLNQL SPYFSRR    VRLIA  AT+FAS +++GV+ARVRGRIT YRG 
Sbjct: 67  DGTGCVSCILWLNQLTSPYFSRRSTPAVRLIASTATHFASLIKIGVVARVRGRITSYRGT 126

Query: 115 VQITVSDVVVERDPNMQILHWLHCVRLVRKCY 20
           VQIT SDVV+ERDPN +I HWL CV+L R CY
Sbjct: 127 VQITASDVVIERDPNAEIFHWLQCVKLARSCY 158


>ref|XP_003612019.1| CST complex subunit STN1 [Medicago truncatula]
           gi|355513354|gb|AES94977.1| CST complex subunit STN1
           [Medicago truncatula]
          Length = 185

 Score =  182 bits (462), Expect = 4e-44
 Identities = 86/153 (56%), Positives = 113/153 (73%), Gaps = 1/153 (0%)
 Frame = -2

Query: 472 ALYNTHVKLLAVDLLKLMPSPTDSSSFVYKGKRLSRAETVGIVVTRDLKPGKFVKFTIDD 293
           +L+NTHVKLLA DLL L P  + + SF      ++RAETVG +  RD KP KF++F IDD
Sbjct: 11  SLHNTHVKLLAFDLLTLTPPISPNHSFTRNSIPITRAETVGTITLRDHKPFKFLRFAIDD 70

Query: 292 GFGCIPCVLWLNQLNSPYFSRRR-PSDVRLIAQAATNFASCVQLGVLARVRGRITGYRGA 116
           G GCIPC+LWLN + SP+ +RRR P D+ L+A AA   A  V++G +ARVRGR+T Y+G 
Sbjct: 71  GTGCIPCILWLNHMTSPHLARRRSPQDLCLLADAAARSAEVVKVGNVARVRGRVTEYKGG 130

Query: 115 VQITVSDVVVERDPNMQILHWLHCVRLVRKCYD 17
           VQITV+DV+ ERDPN+++LHW+ CV L R CY+
Sbjct: 131 VQITVTDVISERDPNVEVLHWVECVNLARNCYN 163


>ref|XP_004145384.1| PREDICTED: CST complex subunit STN1-like [Cucumis sativus]
           gi|449474220|ref|XP_004154109.1| PREDICTED: CST complex
           subunit STN1-like [Cucumis sativus]
           gi|449526303|ref|XP_004170153.1| PREDICTED: CST complex
           subunit STN1-like [Cucumis sativus]
          Length = 168

 Score =  181 bits (460), Expect = 7e-44
 Identities = 88/156 (56%), Positives = 113/156 (72%), Gaps = 1/156 (0%)
 Frame = -2

Query: 472 ALYNTHVKLLAVDLLKL-MPSPTDSSSFVYKGKRLSRAETVGIVVTRDLKPGKFVKFTID 296
           +LY THVKLLA DL  L   S +DS SF  KG  +S  E VG+VV RDLKP +F+KF++D
Sbjct: 10  SLYQTHVKLLAFDLNSLNQTSSSDSVSFSRKGYAVSCTEIVGVVVFRDLKPNRFLKFSVD 69

Query: 295 DGFGCIPCVLWLNQLNSPYFSRRRPSDVRLIAQAATNFASCVQLGVLARVRGRITGYRGA 116
           DG  C+ C+LWLN L S YF+ R   DVR++   AT+FA+ +++G++ RVRG+++ YRG 
Sbjct: 70  DGTACVGCILWLNHLTSSYFASRHHQDVRILGDMATHFAAQIRVGIVVRVRGKLSSYRGM 129

Query: 115 VQITVSDVVVERDPNMQILHWLHCVRLVRKCYDEQP 8
           VQITVSDVVVE DPN +ILHWL  +RL  KCYD  P
Sbjct: 130 VQITVSDVVVEDDPNAEILHWLDSMRLAMKCYDLSP 165


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