BLASTX nr result

ID: Cephaelis21_contig00028913 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00028913
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA78387.1| protein 2 [Petunia x hybrida]                          64   1e-08
ref|NP_001234262.1| myb-related transcription factor [Solanum ly...    62   5e-08
dbj|BAA88221.1| myb-related transcription factor LBM1 [Nicotiana...    56   3e-06

>emb|CAA78387.1| protein 2 [Petunia x hybrida]
          Length = 280

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 44/98 (44%), Positives = 53/98 (54%), Gaps = 20/98 (20%)
 Frame = -2

Query: 278 PQVAK---KNDHNDQ-------IDKSSLSSGIRGNVNY---APVSPLHSSSEISTVT--- 147
           PQ +K   KN+H+ +       +D S   S I+ N+N     P SP  SSSE STVT   
Sbjct: 122 PQNSKRHSKNNHDSKAPSTSKMLDNSESFSTIQENINEPMTGPNSPQRSSSESSTVTADS 181

Query: 146 ----DSATEGNVFIKQEEMDSQEYMPPIDESFWSEDLS 45
               D   +   FIK EEMDS E  P IDESFW+EDLS
Sbjct: 182 LAATDVTNDDQTFIKHEEMDSYENFPEIDESFWTEDLS 219


>ref|NP_001234262.1| myb-related transcription factor [Solanum lycopersicum]
           gi|1370140|emb|CAA66952.1| THM18 [Solanum lycopersicum]
          Length = 265

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 36/100 (36%), Positives = 61/100 (61%), Gaps = 3/100 (3%)
 Frame = -2

Query: 302 STNVQKSDPQVAKKNDHNDQIDKSSLSSGIRGNVNYAPVSPLHSSSEISTVTDSATEGN- 126
           +++V    P  ++ ++++D      LS+  + ++  AP SP  SSSE+S+VT    +   
Sbjct: 131 TSHVSNKGPTTSESSNNSD------LSTSTKQHIKIAPNSPQLSSSEMSSVTLVVDDNQM 184

Query: 125 VFIKQEEMDSQ--EYMPPIDESFWSEDLSAESGNIVKEDQ 12
           V IK+E+++S   EY P IDESFW+++LS E+  I+  DQ
Sbjct: 185 VIIKEEKIESSSSEYFPKIDESFWADELSTENNMIIGHDQ 224


>dbj|BAA88221.1| myb-related transcription factor LBM1 [Nicotiana tabacum]
          Length = 281

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 36/98 (36%), Positives = 55/98 (56%), Gaps = 9/98 (9%)
 Frame = -2

Query: 296 NVQKSDPQVAKKNDHNDQIDKSSLSSGIRGNVNYAPVSPLHSSSEISTVTDSAT------ 135
           N+    P  ++  +++D    S++   I G V   P SP  SSSE+STVT  +T      
Sbjct: 132 NLDSKAPSTSQTFNNSDNF--SNIQEDINGPVT-GPNSPQRSSSEMSTVTVDSTAMTTIT 188

Query: 134 --EGNVFIKQEEMDSQE-YMPPIDESFWSEDLSAESGN 30
             + N+F + +EMDS E ++P IDESFW++DLS    +
Sbjct: 189 IDDQNMFKQLDEMDSSENFIPEIDESFWTDDLSTSDNS 226


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