BLASTX nr result

ID: Cephaelis21_contig00028821 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00028821
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT38805.1| hypothetical protein SDM1_47t00008 [Solanum demis...    63   2e-08
gb|ABD32279.2| reverse transcriptase, putative [Medicago truncat...    59   4e-07
ref|XP_003605542.1| Helicase-like protein [Medicago truncatula] ...    58   9e-07
ref|XP_002317858.1| predicted protein [Populus trichocarpa] gi|2...    58   9e-07
gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas...    58   9e-07

>gb|AAT38805.1| hypothetical protein SDM1_47t00008 [Solanum demissum]
          Length = 1155

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 33/82 (40%), Positives = 43/82 (52%)
 Frame = -1

Query: 247 LGAYEIASGQKINRTKSSFYVSKRMSSQQV*FISQFTSVHKGSIPFKYLGCPIAKGRVRI 68
           L  YE  SGQ IN+ KS F V+       +  I   T ++    P KYLGCP+  G+ + 
Sbjct: 624 LHIYENTSGQLINKNKSCFSVANNAKQNFIAKIKLITCMNHQEFPIKYLGCPLISGKKKT 683

Query: 67  HHFQFLVDCIDARIQSWQNRLL 2
            HF  LV  I  RI+ W N+LL
Sbjct: 684 SHFNELVKNIINRIKGWHNKLL 705


>gb|ABD32279.2| reverse transcriptase, putative [Medicago truncatula]
          Length = 480

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 33/92 (35%), Positives = 48/92 (52%)
 Frame = -1

Query: 277 RRSVRGLFEFLGAYEIASGQKINRTKSSFYVSKRMSSQQV*FISQFTSVHKGSIPFKYLG 98
           ++++R L +F   Y   S Q IN  KS FY     +S     I+        +IPF YLG
Sbjct: 168 KQNIRCLLKFFNDYSEVSAQIINNNKSQFYAGAMTTSHSQ-MIAGTLGFSADNIPFFYLG 226

Query: 97  CPIAKGRVRIHHFQFLVDCIDARIQSWQNRLL 2
           CPI KG+++  +FQ +VD I  +   W+  LL
Sbjct: 227 CPIFKGKLKGIYFQSIVDRIKVKFAIWKCTLL 258


>ref|XP_003605542.1| Helicase-like protein [Medicago truncatula]
            gi|355506597|gb|AES87739.1| Helicase-like protein
            [Medicago truncatula]
          Length = 1641

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 31/82 (37%), Positives = 46/82 (56%)
 Frame = -1

Query: 259  LFEFLGAYEIASGQKINRTKSSFYVSKRMSSQQV*FISQFTSVHKGSIPFKYLGCPIAKG 80
            L + L  Y   SGQ IN +KS+ Y    +S   +  IS     +KGS+PF YLG PI KG
Sbjct: 1557 LMQLLQEYAAISGQHINPSKSTVYYGS-ISVAIIDHISNMIGFNKGSLPFNYLGVPIFKG 1615

Query: 79   RVRIHHFQFLVDCIDARIQSWQ 14
            + +  H Q + D I +++ +W+
Sbjct: 1616 KPKRIHLQPIADKIKSKLSAWK 1637


>ref|XP_002317858.1| predicted protein [Populus trichocarpa] gi|222858531|gb|EEE96078.1|
           predicted protein [Populus trichocarpa]
          Length = 1052

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 30/77 (38%), Positives = 44/77 (57%)
 Frame = -1

Query: 232 IASGQKINRTKSSFYVSKRMSSQQV*FISQFTSVHKGSIPFKYLGCPIAKGRVRIHHFQF 53
           IASG K+N  KS    SK +S       S+ +S+       KYLG P+ +GRV++ HF F
Sbjct: 555 IASGLKVNLDKSRIMGSKNVSRGNKEKFSRLSSIKVAGDLGKYLGFPLIQGRVKMAHFNF 614

Query: 52  LVDCIDARIQSWQNRLL 2
           ++D I  R+  W+ +LL
Sbjct: 615 IIDKIKGRLAEWKGKLL 631


>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease
           H; Endonuclease/exonuclease/phosphatase [Medicago
           truncatula]
          Length = 1246

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 29/79 (36%), Positives = 44/79 (55%)
 Frame = -1

Query: 277 RRSVRGLFEFLGAYEIASGQKINRTKSSFYVSKRMSSQQV*FISQFTSVHKGSIPFKYLG 98
           +R++R L +    Y   SGQ IN  KS F+ S  M+  +V  IS     + GS+PF YLG
Sbjct: 705 KRNIRRLIKIFSQYSEVSGQLINNAKSRFFTSA-MTGSRVQMISSLLGFNVGSLPFTYLG 763

Query: 97  CPIAKGRVRIHHFQFLVDC 41
           CPI +G+ ++    + + C
Sbjct: 764 CPIFRGKPKVCTVSWKILC 782


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