BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00028730
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB48344.1| reverse transcriptase, partial [Arabidopsis thali...   105   3e-21
emb|CAD22569.1| reverse transcriptase [Brassica napus]                105   3e-21
pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi...   104   6e-21
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...   103   1e-20
pir||S65818 RNA-directed DNA polymerase (EC 2.7.7.49) (clone N7)...   103   1e-20

>gb|AAB48344.1| reverse transcriptase, partial [Arabidopsis thaliana]
          Length = 199

 Score =  105 bits (263), Expect = 3e-21
 Identities = 48/93 (51%), Positives = 64/93 (68%)
 Frame = -3

Query: 306 RQILDNVIMANEYIHHLSNPGHGKTAFLALKLDMAKAYDRVEWNFVAAMITKMGFANTFV 127
           R I DNV++ +E +H+L   G  K  F+A+K DM+KAYDR+EW+F+  ++ KMGF   +V
Sbjct: 100 RAITDNVLITHEVLHYLKTSGAKKRCFMAVKSDMSKAYDRIEWDFIRLVMEKMGFHPKWV 159

Query: 126 SWIMNCLSTASYSFNLNGEPGGYVLPSRGIRHG 28
            WIM C++T SYSF LNG   G V P RGIR G
Sbjct: 160 EWIMQCITTVSYSFLLNGAAQGSVKPQRGIRQG 192


>emb|CAD22569.1| reverse transcriptase [Brassica napus]
          Length = 139

 Score =  105 bits (263), Expect = 3e-21
 Identities = 50/93 (53%), Positives = 64/93 (68%)
 Frame = -3

Query: 306 RQILDNVIMANEYIHHLSNPGHGKTAFLALKLDMAKAYDRVEWNFVAAMITKMGFANTFV 127
           R I DN+++A E  H L      K  F+A+K DM+KAYDRVEW+F+ A++ KMGFA T+V
Sbjct: 43  RLITDNILLAQEAFHALRTNTMCKAKFVAIKTDMSKAYDRVEWDFLEALLLKMGFAETWV 102

Query: 126 SWIMNCLSTASYSFNLNGEPGGYVLPSRGIRHG 28
           SWI  C S+ SY   LNGEP G + PSRG+R G
Sbjct: 103 SWIRWCASSVSYQILLNGEPKGNIQPSRGLRQG 135


>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
           (fragment)
          Length = 1365

 Score =  104 bits (260), Expect = 6e-21
 Identities = 46/93 (49%), Positives = 66/93 (70%)
 Frame = -3

Query: 306 RQILDNVIMANEYIHHLSNPGHGKTAFLALKLDMAKAYDRVEWNFVAAMITKMGFANTFV 127
           R I DN+++A+E IH L          +A K DM+KAYDRVEW F+  M+T +GF N ++
Sbjct: 543 RLISDNILVAHEMIHSLRTNDRISKEHMAFKTDMSKAYDRVEWPFLETMMTALGFNNKWI 602

Query: 126 SWIMNCLSTASYSFNLNGEPGGYVLPSRGIRHG 28
           SWIMNC+++ SYS  +NG+P G+++P+RGIR G
Sbjct: 603 SWIMNCVTSVSYSVLINGQPYGHIIPTRGIRQG 635


>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score =  103 bits (258), Expect = 1e-20
 Identities = 44/93 (47%), Positives = 63/93 (67%)
 Frame = -3

Query: 306 RQILDNVIMANEYIHHLSNPGHGKTAFLALKLDMAKAYDRVEWNFVAAMITKMGFANTFV 127
           R I DN+++A E  H L      K  F+A+K DM+KAYD+VEWNF+ A++ KMGF   ++
Sbjct: 328 RLISDNILIAQEMFHGLRTNSSCKDKFMAIKTDMSKAYDQVEWNFIEALLRKMGFCEKWI 387

Query: 126 SWIMNCLSTASYSFNLNGEPGGYVLPSRGIRHG 28
           SWIM C++T  Y   +NG+P G ++P RG+R G
Sbjct: 388 SWIMWCITTVQYKVLINGQPKGLIIPERGLRQG 420


>pir||S65818 RNA-directed DNA polymerase (EC 2.7.7.49) (clone N7) - Arabidopsis
           thaliana retrotransposon Ta20 (fragment)
          Length = 184

 Score =  103 bits (257), Expect = 1e-20
 Identities = 47/91 (51%), Positives = 63/91 (69%)
 Frame = -3

Query: 306 RQILDNVIMANEYIHHLSNPGHGKTAFLALKLDMAKAYDRVEWNFVAAMITKMGFANTFV 127
           R I DNV++ +E +H+L   G  K  F+A+K DM+KAYDR+EW+F+  ++ KMGF   +V
Sbjct: 94  RAITDNVLITHEVLHYLKTSGAKKRCFMAVKSDMSKAYDRIEWDFIRLVMEKMGFHPKWV 153

Query: 126 SWIMNCLSTASYSFNLNGEPGGYVLPSRGIR 34
            WIM C++T SYSF LNG   G V P RGIR
Sbjct: 154 EWIMQCITTVSYSFLLNGAAQGSVKPQRGIR 184