BLASTX nr result

ID: Cephaelis21_contig00028669 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00028669
         (491 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300803.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
ref|XP_002520982.1| F-box/leucine rich repeat protein, putative ...    63   3e-08
ref|XP_002307626.1| predicted protein [Populus trichocarpa] gi|2...    62   4e-08
ref|XP_002275262.1| PREDICTED: F-box/LRR-repeat protein 17 [Viti...    59   5e-07
ref|NP_567005.2| F-box/LRR-repeat protein 17 [Arabidopsis thalia...    55   6e-06

>ref|XP_002300803.1| predicted protein [Populus trichocarpa] gi|222842529|gb|EEE80076.1|
           predicted protein [Populus trichocarpa]
          Length = 588

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 41/102 (40%), Positives = 48/102 (47%), Gaps = 2/102 (1%)
 Frame = -1

Query: 401 SQPH--PVTPGGATTPVSEIFQIKRGGGQKRGNYNCGRCGLPKKGHSCHAPKATGFXXXX 228
           +QPH  P TPGG+T   + +  I     + RGNYNCGRCGLPKKGH CH P  +      
Sbjct: 5   NQPHIPPATPGGSTASFTSL-DIPHRVKKNRGNYNCGRCGLPKKGHVCHLPPTS------ 57

Query: 227 XXXXXXXXXXXXXXXXXXXXXSIVFPPTHRQPCSNLRRALSF 102
                                +    P  RQ  SNLRRALSF
Sbjct: 58  ---TTTTTPTQTPTDSSVSVSTSTSRPPPRQQYSNLRRALSF 96


>ref|XP_002520982.1| F-box/leucine rich repeat protein, putative [Ricinus communis]
           gi|223539819|gb|EEF41399.1| F-box/leucine rich repeat
           protein, putative [Ricinus communis]
          Length = 586

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 41/104 (39%), Positives = 48/104 (46%), Gaps = 4/104 (3%)
 Frame = -1

Query: 401 SQPH--PVTPGGATTPVSEI-FQIKRGGGQK-RGNYNCGRCGLPKKGHSCHAPKATGFXX 234
           +QPH  P TPGG+T  +S   F       +K RG+YNCGRCGLPKKGH+CH P       
Sbjct: 5   NQPHISPATPGGSTASISSSSFDFNNKPPKKQRGSYNCGRCGLPKKGHTCHLPPHPATAS 64

Query: 233 XXXXXXXXXXXXXXXXXXXXXXXSIVFPPTHRQPCSNLRRALSF 102
                                       P  RQ  S+LRRALSF
Sbjct: 65  TTPTSADSSSASTSRPL-----------PLPRQQYSHLRRALSF 97


>ref|XP_002307626.1| predicted protein [Populus trichocarpa] gi|222857075|gb|EEE94622.1|
           predicted protein [Populus trichocarpa]
          Length = 588

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 39/102 (38%), Positives = 47/102 (46%), Gaps = 2/102 (1%)
 Frame = -1

Query: 401 SQPH--PVTPGGATTPVSEIFQIKRGGGQKRGNYNCGRCGLPKKGHSCHAPKATGFXXXX 228
           +QPH  P TP G+    + +    R   + RG+YNCGRCG+PKKGH CH P +T      
Sbjct: 5   NQPHIPPATPSGSIASFTSMDTPHRAK-KHRGSYNCGRCGVPKKGHVCHLPPSTTTTPTQ 63

Query: 227 XXXXXXXXXXXXXXXXXXXXXSIVFPPTHRQPCSNLRRALSF 102
                                    PP  RQ  SNLRRALSF
Sbjct: 64  TPTDSSVSVSTSTSRP---------PPPSRQQHSNLRRALSF 96


>ref|XP_002275262.1| PREDICTED: F-box/LRR-repeat protein 17 [Vitis vinifera]
           gi|297735494|emb|CBI17934.3| unnamed protein product
           [Vitis vinifera]
          Length = 574

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 37/99 (37%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
 Frame = -1

Query: 395 PHPVTPGGAT-TPVSEIFQIKRGGGQKRGNYNCGRCGLPKKGHSCHAPKATGFXXXXXXX 219
           PHP T GG++ + ++ +   KRG  +KRG+YNCGRCG PKKGHSC+   A          
Sbjct: 7   PHPPTGGGSSASAMAALADAKRG--KKRGSYNCGRCGQPKKGHSCNLSGAA--------- 55

Query: 218 XXXXXXXXXXXXXXXXXXSIVFPPTHRQPCSNLRRALSF 102
                             +    P+ RQ  ++LRRALSF
Sbjct: 56  ------------TPTDSSASTADPSPRQQYTHLRRALSF 82


>ref|NP_567005.2| F-box/LRR-repeat protein 17 [Arabidopsis thaliana]
           gi|75331246|sp|Q8W104.1|FBL17_ARATH RecName:
           Full=F-box/LRR-repeat protein 17; AltName:
           Full=F-box-like protein 17
           gi|18087570|gb|AAL58916.1|AF462827_1 AT3g54650/T5N23_10
           [Arabidopsis thaliana] gi|22655356|gb|AAM98270.1|
           At3g54650/T5N23_10 [Arabidopsis thaliana]
           gi|332645740|gb|AEE79261.1| F-box/LRR-repeat protein 17
           [Arabidopsis thaliana]
          Length = 593

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 34/99 (34%), Positives = 45/99 (45%)
 Frame = -1

Query: 398 QPHPVTPGGATTPVSEIFQIKRGGGQKRGNYNCGRCGLPKKGHSCHAPKATGFXXXXXXX 219
           QPH ++P  AT  +S   + +R   + RG+YNCGRCG PKKGH C               
Sbjct: 4   QPH-ISPNTATAAISAALESQRSR-KNRGSYNCGRCGQPKKGHVCLLTAPPDIPTTPIAS 61

Query: 218 XXXXXXXXXXXXXXXXXXSIVFPPTHRQPCSNLRRALSF 102
                             S+   P+ RQ  ++LRRALSF
Sbjct: 62  EPVSCISAAASSSRSTVLSLTAAPSSRQTFTHLRRALSF 100


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