BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00028624
         (541 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulga...    85   8e-15
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc...    80   3e-13
emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga...    76   4e-12
emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga...    71   9e-11
gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa ...    70   2e-10

>emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1363

 Score = 84.7 bits (208), Expect = 8e-15
 Identities = 51/145 (35%), Positives = 74/145 (51%), Gaps = 1/145 (0%)
 Frame = +2

Query: 101 DFLVTFVHAHCSRTDRLPLWNDLSQLCLTN-MPGVLYGDFNDIISTEEKRGGIPFQXXXX 277
           + L+T +HA    ++R   W DL++       P ++ GD N+++   EK GG        
Sbjct: 101 EVLLTGMHAPSVVSERNKYWVDLTEDSPPRGTPWLVAGDMNEVLHGNEKMGGRQVGKEQG 160

Query: 278 XXXXXXXXXXXLLDAGFSGNSFTWCSNRAGRARI*KRLDRVLLNNQWLDLGLTNMVTHLA 457
                      LLD GF G  FTW + R G + I +RLDR L+N++WLDL     V HL 
Sbjct: 161 KQCKDWIAANALLDLGFQGPKFTWTNGRTGGSLIKERLDRALVNSEWLDLFPDTKVIHLP 220

Query: 458 RVGSDHAPLLVAHSQQSKPKCSFRF 532
           R  SDH PLL+  ++  + + SF F
Sbjct: 221 RTFSDHCPLLILFNENPRSE-SFPF 244


>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
          Length = 1214

 Score = 79.7 bits (195), Expect = 3e-13
 Identities = 53/173 (30%), Positives = 82/173 (47%), Gaps = 4/173 (2%)
 Frame = +2

Query: 2   RIWVVFDDSFTANIHSQLDQFLSIKCSHYALTTDFLVTFVHAHCSRTDRLPLWNDLSQLC 181
           RIWVV+D +    + S+ DQ +S       ++T+F+VTFV+A   R  R  LW++L  L 
Sbjct: 69  RIWVVWDPAVEVTVLSKSDQTISCTVKLPHISTEFVVTFVYAVNCRYGRRRLWSELELLA 128

Query: 182 ----LTNMPGVLYGDFNDIISTEEKRGGIPFQXXXXXXXXXXXXXXXLLDAGFSGNSFTW 349
                ++ P ++ GDFN  +   +   G                   + D  F GN +TW
Sbjct: 129 ANQTTSDKPWIILGDFNQSLDPVDASTGGSRITRGMEEFRECLLTSNISDLPFRGNHYTW 188

Query: 350 CSNRAGRARI*KRLDRVLLNNQWLDLGLTNMVTHLARVGSDHAPLLVAHSQQS 508
            +N+     I K++DR+L+N+ WL     +  +  A   SDH P  V  S QS
Sbjct: 189 WNNQENNP-IAKKIDRILVNDSWLIASPLSYGSFCAMEFSDHCPSCVNISNQS 240


>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1362

 Score = 75.9 bits (185), Expect = 4e-12
 Identities = 43/108 (39%), Positives = 57/108 (52%)
 Frame = +2

Query: 167 LSQLCLTNMPGVLYGDFNDIISTEEKRGGIPFQXXXXXXXXXXXXXXXLLDAGFSGNSFT 346
           L Q C  ++P + +GDFN+I S EEK GG P                 + D G+ GN FT
Sbjct: 124 LKQQC--SLPVLFFGDFNEITSIEEKEGGAPRCERVMDAFREVIDDCAVKDLGYVGNRFT 181

Query: 347 WCSNRAGRARI*KRLDRVLLNNQWLDLGLTNMVTHLARVGSDHAPLLV 490
           W    +    I +RLDR+L N++W D   +  V HL R  SDHAPLL+
Sbjct: 182 WQRGNSPSTLIRERLDRMLANDEWCDNFPSWEVVHLPRYRSDHAPLLL 229


>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score = 71.2 bits (173), Expect = 9e-11
 Identities = 41/121 (33%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
 Frame = +2

Query: 158 WNDLSQLCL-TNMPGVLYGDFNDIISTEEKRGGIPFQXXXXXXXXXXXXXXXLLDAGFSG 334
           W+ L  LC  T++P +L GDFN+I+S  EK GG                   L D G+ G
Sbjct: 117 WSLLRHLCEDTSLPILLGGDFNEILSAAEKEGGANRVRREMINFRDTLDTLALRDLGYVG 176

Query: 335 NSFTWCSNRAGRARI*KRLDRVLLNNQWLDLGLTNMVTHLARVGSDHAPLLVAHSQQSKP 514
             +TW   R+    I +RLDR L +N WLDL   ++  H  R  SDH+ +++   +  +P
Sbjct: 177 TWYTWERGRSPSTCIRERLDRYLCSNSWLDLYPDSVPEHTIRYKSDHSAIVLRSQRAGRP 236

Query: 515 K 517
           +
Sbjct: 237 R 237


>gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1656

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 42/137 (30%), Positives = 66/137 (48%), Gaps = 1/137 (0%)
 Frame = +2

Query: 110  VTFVHAHCSRTDRLPLWNDL-SQLCLTNMPGVLYGDFNDIISTEEKRGGIPFQXXXXXXX 286
            +T+++ +    ++   W  + S+  + ++P ++ GDFN+++   EK GG P         
Sbjct: 707  ITWMYGNPHDNEKRAFWRLMYSRFPVQSLPWLVLGDFNEVLDPSEKWGGGPPLPWRIKLF 766

Query: 287  XXXXXXXXLLDAGFSGNSFTWCSNRAGRARI*KRLDRVLLNNQWLDLGLTNMVTHLARVG 466
                    L D  F G  F+W + R GR  I +RLDR L N  W        + HL ++G
Sbjct: 767  RDFLNNGHLRDLHFKGPGFSWFAMRHGRVFIKERLDRALGNIAWSSSQPNTQILHLPKIG 826

Query: 467  SDHAPLLVAHSQQSKPK 517
            SDH PLL+     S PK
Sbjct: 827  SDHRPLLL----DSNPK 839