BLASTX nr result

ID: Cephaelis21_contig00028623 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00028623
         (481 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containi...   236   2e-60
ref|XP_002322810.1| predicted protein [Populus trichocarpa] gi|2...   234   5e-60
ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containi...   233   1e-59
ref|XP_003532658.1| PREDICTED: pentatricopeptide repeat-containi...   230   1e-58
sp|Q8S9M4.2|PP198_ARATH RecName: Full=Pentatricopeptide repeat-c...   219   2e-55

>ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Cucumis sativus]
           gi|449526872|ref|XP_004170437.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g41080-like [Cucumis sativus]
          Length = 667

 Score =  236 bits (601), Expect = 2e-60
 Identities = 105/160 (65%), Positives = 138/160 (86%)
 Frame = -2

Query: 480 RLKPGLQHYTCIVDLLGRSGRLEEAEGYIRSMPIKPDIVIWKTLLSSCKIHKNSDMAERI 301
           +LKP ++HYTC+VDLLGR+GRLEEAEG IRSMP++PD +IWKTLL++CK+HK ++MAERI
Sbjct: 427 KLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLLAACKLHKEAEMAERI 486

Query: 300 GEEVMKIDPQDPSSYVLLANIQASTKRWQDVSEMRKAMRDNNVKKEPGISWLEVKNQIHQ 121
            EE++K+DP D +SYVLL+NI AS + W +VS++RKAMRD +V+KEPGISWLE+KN +HQ
Sbjct: 487 SEEIIKLDPLDAASYVLLSNIHASARNWLNVSQIRKAMRDRSVRKEPGISWLELKNLVHQ 546

Query: 120 FIKSDKSHPQSEQIDKYLQELIEEIRLEGYVPDIGSVLHD 1
           F   DKSHPQ  +ID YL+EL+ E++  GYVP++GSVLHD
Sbjct: 547 FSMGDKSHPQYFEIDLYLKELMSELKQHGYVPELGSVLHD 586


>ref|XP_002322810.1| predicted protein [Populus trichocarpa] gi|222867440|gb|EEF04571.1|
           predicted protein [Populus trichocarpa]
          Length = 562

 Score =  234 bits (597), Expect = 5e-60
 Identities = 105/159 (66%), Positives = 135/159 (84%)
 Frame = -2

Query: 477 LKPGLQHYTCIVDLLGRSGRLEEAEGYIRSMPIKPDIVIWKTLLSSCKIHKNSDMAERIG 298
           LKP L+HYTC+VDLLGRSG L+EAE  IRSMP++ D+VIWKTLLS+C+IH+N+DMA R  
Sbjct: 323 LKPRLEHYTCVVDLLGRSGCLDEAEAMIRSMPLEADVVIWKTLLSACRIHRNADMATRTA 382

Query: 297 EEVMKIDPQDPSSYVLLANIQASTKRWQDVSEMRKAMRDNNVKKEPGISWLEVKNQIHQF 118
           EE+++++PQD ++YVLL+NI AS KRW+DVS++R  MRD NVKKEPG+SWLEVKN++ QF
Sbjct: 383 EEILRLNPQDSATYVLLSNIHASAKRWKDVSKVRTTMRDRNVKKEPGVSWLEVKNRVFQF 442

Query: 117 IKSDKSHPQSEQIDKYLQELIEEIRLEGYVPDIGSVLHD 1
              DKSHP SE+ID YL+EL+EE++L GYVPD  +V HD
Sbjct: 443 SMGDKSHPMSEEIDLYLKELMEEMKLRGYVPDTATVFHD 481


>ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
           [Vitis vinifera]
          Length = 657

 Score =  233 bits (594), Expect = 1e-59
 Identities = 108/159 (67%), Positives = 130/159 (81%)
 Frame = -2

Query: 477 LKPGLQHYTCIVDLLGRSGRLEEAEGYIRSMPIKPDIVIWKTLLSSCKIHKNSDMAERIG 298
           +KP L+HYTC+VDLLGR G +EEAE  IRSMP+K D++ WKTLLS+CKIHK ++MA RI 
Sbjct: 418 VKPRLEHYTCMVDLLGRYGSVEEAEALIRSMPVKADVITWKTLLSACKIHKKTEMARRIS 477

Query: 297 EEVMKIDPQDPSSYVLLANIQASTKRWQDVSEMRKAMRDNNVKKEPGISWLEVKNQIHQF 118
           EEV ++DP+DP  YVLL+NI AS KRW DVS++RKAMRD  +KKEPGISWLEVKNQIHQF
Sbjct: 478 EEVFRLDPRDPVPYVLLSNIHASDKRWDDVSDVRKAMRDRKLKKEPGISWLEVKNQIHQF 537

Query: 117 IKSDKSHPQSEQIDKYLQELIEEIRLEGYVPDIGSVLHD 1
              DKSHP+S +I  YL+EL  E++  GYVPDI SVLHD
Sbjct: 538 CMGDKSHPKSVEIASYLRELTSEMKKRGYVPDIDSVLHD 576


>ref|XP_003532658.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Glycine max]
          Length = 674

 Score =  230 bits (586), Expect = 1e-58
 Identities = 106/159 (66%), Positives = 133/159 (83%)
 Frame = -2

Query: 477 LKPGLQHYTCIVDLLGRSGRLEEAEGYIRSMPIKPDIVIWKTLLSSCKIHKNSDMAERIG 298
           LK  LQHYTC+VDLLGRSG LEEAE  IRSMP+K D +IWKTLLS+CKIHKN+++A R+ 
Sbjct: 435 LKARLQHYTCLVDLLGRSGCLEEAEAMIRSMPVKADAIIWKTLLSACKIHKNAEIARRVA 494

Query: 297 EEVMKIDPQDPSSYVLLANIQASTKRWQDVSEMRKAMRDNNVKKEPGISWLEVKNQIHQF 118
           +EV++IDPQD +SYVLLANI +S  RWQ+VSE+R+AM+D  VKKEPGISW+EVKNQ+HQF
Sbjct: 495 DEVLRIDPQDSASYVLLANIYSSANRWQNVSEVRRAMKDKMVKKEPGISWVEVKNQVHQF 554

Query: 117 IKSDKSHPQSEQIDKYLQELIEEIRLEGYVPDIGSVLHD 1
              D+ HP+  +I++YL+EL  EI+ +GYVPD  SVLHD
Sbjct: 555 HMGDECHPKHVEINQYLEELTSEIKRQGYVPDTSSVLHD 593


>sp|Q8S9M4.2|PP198_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g41080
          Length = 650

 Score =  219 bits (558), Expect = 2e-55
 Identities = 101/158 (63%), Positives = 130/158 (82%)
 Frame = -2

Query: 474 KPGLQHYTCIVDLLGRSGRLEEAEGYIRSMPIKPDIVIWKTLLSSCKIHKNSDMAERIGE 295
           KPGL+HYTC+VDLLGR+G L++AE  IRSMPIK DIVIWKTLLS+C IHKN++MA+R+ +
Sbjct: 412 KPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFK 471

Query: 294 EVMKIDPQDPSSYVLLANIQASTKRWQDVSEMRKAMRDNNVKKEPGISWLEVKNQIHQFI 115
           E+++IDP D + YVLLAN+ AS KRW+DVSE+RK+MRD NVKKE GISW E K ++HQF 
Sbjct: 472 EILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFK 531

Query: 114 KSDKSHPQSEQIDKYLQELIEEIRLEGYVPDIGSVLHD 1
             D+S  +S++I  YL+EL  E++L+GY PD  SVLHD
Sbjct: 532 MGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHD 569


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