BLASTX nr result

ID: Cephaelis21_contig00028609 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00028609
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303023.1| predicted protein [Populus trichocarpa] gi|2...   102   2e-20
ref|XP_002864611.1| hypothetical protein ARALYDRAFT_496037 [Arab...   101   6e-20
ref|XP_003635064.1| PREDICTED: putative pentatricopeptide repeat...   100   9e-20
ref|XP_003635033.1| PREDICTED: putative pentatricopeptide repeat...   100   9e-20
emb|CBI38389.3| unnamed protein product [Vitis vinifera]              100   9e-20

>ref|XP_002303023.1| predicted protein [Populus trichocarpa] gi|222844749|gb|EEE82296.1|
           predicted protein [Populus trichocarpa]
          Length = 621

 Score =  102 bits (255), Expect = 2e-20
 Identities = 50/84 (59%), Positives = 59/84 (70%)
 Frame = -3

Query: 255 LQNCTAFKEIPPIHADIIKNGHKDDPYVEFELIRVCSKFEFIDYAFDVFRDIRNPNVFLY 76
           LQNC    +IPPI+A II+N H  DP+V FEL+RVCS    I YA  +F   +NPNV+LY
Sbjct: 39  LQNCKHNNQIPPIYAKIIRNHHHQDPFVVFELLRVCSNLNSIGYASKIFSHTQNPNVYLY 98

Query: 75  TALIDGLVLSGSYLDSIRLYIEMI 4
           TALIDGLVLS  Y D I LY +MI
Sbjct: 99  TALIDGLVLSCYYTDGIHLYYQMI 122


>ref|XP_002864611.1| hypothetical protein ARALYDRAFT_496037 [Arabidopsis lyrata subsp.
           lyrata] gi|297310446|gb|EFH40870.1| hypothetical protein
           ARALYDRAFT_496037 [Arabidopsis lyrata subsp. lyrata]
          Length = 534

 Score =  101 bits (252), Expect = 6e-20
 Identities = 50/98 (51%), Positives = 63/98 (64%)
 Frame = -3

Query: 297 NNCRDVAAKNIMFSLQNCTAFKEIPPIHADIIKNGHKDDPYVEFELIRVCSKFEFIDYAF 118
           N  R    K ++  L+NC    ++P IHA II+  H  D +V FELIRVCS  + IDYA+
Sbjct: 22  NTLRLARRKTLISLLRNCKNNAQVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSIDYAY 81

Query: 117 DVFRDIRNPNVFLYTALIDGLVLSGSYLDSIRLYIEMI 4
           DVFR + NPNV+LYTA+IDG V SG   D + LY  MI
Sbjct: 82  DVFRYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMI 119


>ref|XP_003635064.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59200, chloroplastic-like [Vitis vinifera]
          Length = 650

 Score =  100 bits (250), Expect = 9e-20
 Identities = 47/90 (52%), Positives = 62/90 (68%)
 Frame = -3

Query: 273 KNIMFSLQNCTAFKEIPPIHADIIKNGHKDDPYVEFELIRVCSKFEFIDYAFDVFRDIRN 94
           K I+  LQ      ++ PIHA +I+NGH  DP++ FEL+R CSK   IDYA  +F+   N
Sbjct: 50  KQIISLLQRSKHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHN 109

Query: 93  PNVFLYTALIDGLVLSGSYLDSIRLYIEMI 4
           PNV+LYTALIDG V SG+Y D+I+LY  M+
Sbjct: 110 PNVYLYTALIDGFVSSGNYFDAIQLYSRML 139


>ref|XP_003635033.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59200, chloroplastic-like [Vitis vinifera]
          Length = 650

 Score =  100 bits (250), Expect = 9e-20
 Identities = 47/90 (52%), Positives = 63/90 (70%)
 Frame = -3

Query: 273 KNIMFSLQNCTAFKEIPPIHADIIKNGHKDDPYVEFELIRVCSKFEFIDYAFDVFRDIRN 94
           K I+  LQ      ++ PIHA +I+NGH  DP++ FEL+R CSK   IDYA  +F+   N
Sbjct: 50  KQIISLLQRSRHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHN 109

Query: 93  PNVFLYTALIDGLVLSGSYLDSIRLYIEMI 4
           PNV+LYTALIDG V SG+YL++I+LY  M+
Sbjct: 110 PNVYLYTALIDGFVSSGNYLEAIQLYSRML 139


>emb|CBI38389.3| unnamed protein product [Vitis vinifera]
          Length = 614

 Score =  100 bits (250), Expect = 9e-20
 Identities = 47/90 (52%), Positives = 63/90 (70%)
 Frame = -3

Query: 273 KNIMFSLQNCTAFKEIPPIHADIIKNGHKDDPYVEFELIRVCSKFEFIDYAFDVFRDIRN 94
           K I+  LQ      ++ PIHA +I+NGH  DP++ FEL+R CSK   IDYA  +F+   N
Sbjct: 40  KQIISLLQRSRHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHN 99

Query: 93  PNVFLYTALIDGLVLSGSYLDSIRLYIEMI 4
           PNV+LYTALIDG V SG+YL++I+LY  M+
Sbjct: 100 PNVYLYTALIDGFVSSGNYLEAIQLYSRML 129


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