BLASTX nr result

ID: Cephaelis21_contig00028541 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00028541
         (614 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004171466.1| PREDICTED: mediator of RNA polymerase II tra...    60   2e-07
ref|XP_004137040.1| PREDICTED: uncharacterized protein LOC101220...    60   2e-07
ref|XP_002530460.1| transcription cofactor, putative [Ricinus co...    57   3e-06
ref|XP_002327402.1| predicted protein [Populus trichocarpa] gi|2...    55   1e-05

>ref|XP_004171466.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           15a-like, partial [Cucumis sativus]
          Length = 589

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 32/64 (50%), Positives = 46/64 (71%), Gaps = 8/64 (12%)
 Frame = +1

Query: 10  QTYLYQQQFQN-HQLMKQKFQQGGLAQSLM-------QQQNLLPASQIQTSPQAVMQSSV 165
           Q YLYQQQ Q  HQ+MK KFQQG ++  LM       QQQN++ ++Q+Q+S Q+VMQ S+
Sbjct: 237 QQYLYQQQQQQMHQIMKHKFQQGSMSHPLMQPPHIPQQQQNVMQSNQMQSSQQSVMQPSM 296

Query: 166 MQTA 177
           +Q++
Sbjct: 297 LQSS 300


>ref|XP_004137040.1| PREDICTED: uncharacterized protein LOC101220890 [Cucumis sativus]
          Length = 1345

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 32/64 (50%), Positives = 46/64 (71%), Gaps = 8/64 (12%)
 Frame = +1

Query: 10  QTYLYQQQFQN-HQLMKQKFQQGGLAQSLM-------QQQNLLPASQIQTSPQAVMQSSV 165
           Q YLYQQQ Q  HQ+MK KFQQG ++  LM       QQQN++ ++Q+Q+S Q+VMQ S+
Sbjct: 242 QQYLYQQQQQQMHQIMKHKFQQGSMSHPLMQPPHIPQQQQNVMQSNQMQSSQQSVMQPSM 301

Query: 166 MQTA 177
           +Q++
Sbjct: 302 LQSS 305


>ref|XP_002530460.1| transcription cofactor, putative [Ricinus communis]
           gi|223530005|gb|EEF31930.1| transcription cofactor,
           putative [Ricinus communis]
          Length = 1382

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 36/69 (52%), Positives = 41/69 (59%), Gaps = 12/69 (17%)
 Frame = +1

Query: 1   QNAQTYLYQQQFQNHQLMKQKFQQGGL-----------AQSLMQQQNLLPASQIQTSPQA 147
           QN   Y+YQQQ    QLMKQKFQQG L            Q   QQQNLL  +Q+Q+S Q+
Sbjct: 238 QNPTQYMYQQQQIQQQLMKQKFQQGNLPPNNLVQSHLQQQQQQQQQNLLQPAQLQSSQQS 297

Query: 148 VMQ-SSVMQ 171
            MQ SSVMQ
Sbjct: 298 SMQTSSVMQ 306


>ref|XP_002327402.1| predicted protein [Populus trichocarpa] gi|222835956|gb|EEE74377.1|
           predicted protein [Populus trichocarpa]
          Length = 1204

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 36/68 (52%), Positives = 42/68 (61%), Gaps = 10/68 (14%)
 Frame = +1

Query: 1   QNAQTYLYQQQFQNHQLMKQKFQQGGLAQSLM--------QQQNLLPASQIQTSPQ--AV 150
           QN Q YLYQQQ Q  QL+KQK QQG    SL+        QQQNLL  +Q+Q+  Q   V
Sbjct: 145 QNPQQYLYQQQIQQ-QLLKQKLQQGNHPHSLVQSHIHHQQQQQNLLQPNQLQSGLQTSTV 203

Query: 151 MQSSVMQT 174
           MQ S+MQT
Sbjct: 204 MQPSMMQT 211


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