BLASTX nr result
ID: Cephaelis21_contig00028541
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cephaelis21_contig00028541 (614 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004171466.1| PREDICTED: mediator of RNA polymerase II tra... 60 2e-07 ref|XP_004137040.1| PREDICTED: uncharacterized protein LOC101220... 60 2e-07 ref|XP_002530460.1| transcription cofactor, putative [Ricinus co... 57 3e-06 ref|XP_002327402.1| predicted protein [Populus trichocarpa] gi|2... 55 1e-05 >ref|XP_004171466.1| PREDICTED: mediator of RNA polymerase II transcription subunit 15a-like, partial [Cucumis sativus] Length = 589 Score = 60.5 bits (145), Expect = 2e-07 Identities = 32/64 (50%), Positives = 46/64 (71%), Gaps = 8/64 (12%) Frame = +1 Query: 10 QTYLYQQQFQN-HQLMKQKFQQGGLAQSLM-------QQQNLLPASQIQTSPQAVMQSSV 165 Q YLYQQQ Q HQ+MK KFQQG ++ LM QQQN++ ++Q+Q+S Q+VMQ S+ Sbjct: 237 QQYLYQQQQQQMHQIMKHKFQQGSMSHPLMQPPHIPQQQQNVMQSNQMQSSQQSVMQPSM 296 Query: 166 MQTA 177 +Q++ Sbjct: 297 LQSS 300 >ref|XP_004137040.1| PREDICTED: uncharacterized protein LOC101220890 [Cucumis sativus] Length = 1345 Score = 60.5 bits (145), Expect = 2e-07 Identities = 32/64 (50%), Positives = 46/64 (71%), Gaps = 8/64 (12%) Frame = +1 Query: 10 QTYLYQQQFQN-HQLMKQKFQQGGLAQSLM-------QQQNLLPASQIQTSPQAVMQSSV 165 Q YLYQQQ Q HQ+MK KFQQG ++ LM QQQN++ ++Q+Q+S Q+VMQ S+ Sbjct: 242 QQYLYQQQQQQMHQIMKHKFQQGSMSHPLMQPPHIPQQQQNVMQSNQMQSSQQSVMQPSM 301 Query: 166 MQTA 177 +Q++ Sbjct: 302 LQSS 305 >ref|XP_002530460.1| transcription cofactor, putative [Ricinus communis] gi|223530005|gb|EEF31930.1| transcription cofactor, putative [Ricinus communis] Length = 1382 Score = 57.0 bits (136), Expect = 3e-06 Identities = 36/69 (52%), Positives = 41/69 (59%), Gaps = 12/69 (17%) Frame = +1 Query: 1 QNAQTYLYQQQFQNHQLMKQKFQQGGL-----------AQSLMQQQNLLPASQIQTSPQA 147 QN Y+YQQQ QLMKQKFQQG L Q QQQNLL +Q+Q+S Q+ Sbjct: 238 QNPTQYMYQQQQIQQQLMKQKFQQGNLPPNNLVQSHLQQQQQQQQQNLLQPAQLQSSQQS 297 Query: 148 VMQ-SSVMQ 171 MQ SSVMQ Sbjct: 298 SMQTSSVMQ 306 >ref|XP_002327402.1| predicted protein [Populus trichocarpa] gi|222835956|gb|EEE74377.1| predicted protein [Populus trichocarpa] Length = 1204 Score = 55.1 bits (131), Expect = 1e-05 Identities = 36/68 (52%), Positives = 42/68 (61%), Gaps = 10/68 (14%) Frame = +1 Query: 1 QNAQTYLYQQQFQNHQLMKQKFQQGGLAQSLM--------QQQNLLPASQIQTSPQ--AV 150 QN Q YLYQQQ Q QL+KQK QQG SL+ QQQNLL +Q+Q+ Q V Sbjct: 145 QNPQQYLYQQQIQQ-QLLKQKLQQGNHPHSLVQSHIHHQQQQQNLLQPNQLQSGLQTSTV 203 Query: 151 MQSSVMQT 174 MQ S+MQT Sbjct: 204 MQPSMMQT 211